Danaus plexippus (monarch butterfly): KGM_211156
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Entry
KGM_211156 CDS
T04344
Name
(GenBank) putative XPA-binding protein 2
KO
K12867
pre-mRNA-splicing factor SYF1
Organism
dpl
Danaus plexippus (monarch butterfly)
Pathway
dpl03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
dpl00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
KGM_211156
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dpl03019
]
KGM_211156
03041 Spliceosome [BR:
dpl03041
]
KGM_211156
Messenger RNA biogenesis [BR:
dpl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
KGM_211156
Spliceosome [BR:
dpl03041
]
Complex B
Other components
Prp19-related factors
KGM_211156
Complex C
KGM_211156
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HAT_Syf1_M
HAT_Syf1_CNRKL1_N
HAT_Syf1_CNRKL1_C
HAT_PRP39_N
TPR_14
HAT_PRP39_C
Suf
TPR_8
TPR_2
TPR_12
TPR_15
TPR_10
DHR-2_Lobe_A
PPR
NRDE-2
DMP19
AbiH
Motif
Other DBs
NCBI-ProteinID:
OWR44340
UniProt:
A0A212ES65
LinkDB
All DBs
Position
Unknown
AA seq
626 aa
AA seq
DB search
MPVLDGKEIDIFFSEEDLPYEEEILRNPFSVRHWLRYIEHKKAAPKYEINIIYERALKEL
PGSFKLWYNYLKLRRKQIRGRCITDPAYEDVNNCFERSLVFMHKMPRIWMDYCTFLTDQW
KITATRKAFDSALRALPITQHHRIWPLYLNFLKKHNIPETAVRVFRRYLKLCPEDTEEYI
DYLISIEKLDEAALKLAQLVNNENFQSKHGKSNHQLWNELCELISKNPDKIHSLNVDAII
RGGLRRYTDQLGHLWNSLADYYVRSGLFERARDIYEEAIQTVTTVRDFTQVFDAYAQFEE
LSLSKKMEEVAKKPNPTEDEDIDLELRLARFEYLMERRLLLLNSVLLRQNPHNIAEWHKR
VKLYEGKPHEIIDTYTEAVQTVDPKLAVGKLYTLWVGFAKFYESNDQIDDARLIFEKATQ
AAEIYGVPKTRQIYEKAIETLPDEKAREMCLRFSEMETKLGEIDRARAIYAHCSQMCDPR
ITTEFWNTWKEFEVRHGNEDTMREMLRIKRSVQATYNTQVNMMSAQMLGSAAQAAGTISD
LAPGMKDGMRLLEAKAAEMAVQSKGNILFVRGETQGLKENDKVVNPDEIDIDDEESDNSN
DDEEVAPVQKKEIPAAVFGGLVPENQ
NT seq
1881 nt
NT seq
+upstream
nt +downstream
nt
atgcctgtacttgatgggaaagaaatagacatattttttagtgaggaggacctaccatat
gaagaagaaatattaaggaatccattttcggttaggcattggctaagatacatagaacat
aaaaaagcagctcccaaatatgaaattaatatcatttatgaaagagccctgaaagaacta
ccaggatcatttaagctgtggtacaactacttaaaacttaggagaaaacaaataagaggt
cgatgtataacagatcctgcgtatgaagatgttaataattgttttgaaagatccctcgta
tttatgcacaaaatgcctagaatatggatggactattgtacatttttgactgatcagtgg
aaaattaccgctacaagaaaagcatttgattctgctttacgggctttaccaattacacag
catcacagaatatggcccctctatttaaatttcttgaaaaagcataatattccagaaact
gctgttagggtattcagacgctacctaaagttgtgtcccgaagatactgaagaatatatt
gattatttaatatctatagaaaaattagatgaagctgctttaaaattagctcaacttgta
aacaatgagaattttcaatccaaacatggaaaatccaaccaccagctttggaatgaattg
tgtgaactaatatccaaaaacccagacaaaattcattcacttaatgttgatgccataata
agaggtggacttcgtcgctacactgaccagctgggtcatctgtggaattcactagctgat
tactatgttagaagtgggttatttgagagagccagagatatatatgaggaagccattcag
actgtcacaacagtaagagatttcacccaagtctttgatgcctatgctcaatttgaagag
ttgagtttgagtaaaaagatggaagaagttgcaaagaaacccaaccccactgaggatgaa
gatattgatttagaattacgtcttgctaggtttgaatatttgatggaaagaagattgtta
ctgctaaattcagtactattaagacaaaatccacataatattgctgaatggcacaaaaga
gtaaagctctatgaaggtaaacctcatgaaatcatagatacatatacagaagctgtgcag
acagtagatccaaaattagcggtaggaaaactttatacactgtgggttggttttgcaaaa
ttttatgagagcaatgaccaaattgatgatgcaaggttaatttttgagaaagcgacccaa
gctgcagaaatatatggcgtacccaaaacgcgacaaatatatgaaaaagcaatcgagact
ctaccagatgaaaaagctagagagatgtgcttgcgattttcggaaatggaaacgaaactt
ggggagatcgacagagctcgtgccatatacgctcactgtagtcagatgtgcgatccaagg
attacgacagaattctggaatacgtggaaagaatttgaagtaaggcatggtaatgaagat
actatgagggaaatgcttagaattaagagaagtgtacaagctacttataacacgcaagtc
aatatgatgtcagcccaaatgctaggctcagctgctcaggctgcgggtacaatatcggat
cttgcacccggaatgaaggacggcatgagattgttggaggctaaagctgccgaaatggct
gtccaaagcaagggcaatatattgttcgtcagaggtgaaacacaaggtctcaaagaaaac
gataaagttgttaatcctgatgaaattgatattgatgacgaagaatctgataatagtaat
gatgacgaggaagttgcacctgtacagaaaaaggaaattcctgcagcagtgtttggaggc
ttggttccagaaaatcaataa
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