Danaus plexippus (monarch butterfly): KGM_212040
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Entry
KGM_212040 CDS
T04344
Name
(GenBank) General transcription factor IIH subunit 1
KO
K03141
transcription initiation factor TFIIH subunit 1
Organism
dpl
Danaus plexippus (monarch butterfly)
Pathway
dpl03022
Basal transcription factors
dpl03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
dpl00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
KGM_212040
09124 Replication and repair
03420 Nucleotide excision repair
KGM_212040
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dpl03021
]
KGM_212040
03400 DNA repair and recombination proteins [BR:
dpl03400
]
KGM_212040
Transcription machinery [BR:
dpl03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
KGM_212040
DNA repair and recombination proteins [BR:
dpl03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
KGM_212040
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PH_TFIIH
BSD
Motif
Other DBs
NCBI-ProteinID:
OWR41542
UniProt:
A0A212EJ66
LinkDB
All DBs
Position
Unknown
AA seq
561 aa
AA seq
DB search
MTTSSEDVLLSVGHVRYKKGDGTLYVMNQRLAWMLENKDTVAVSHKYADIKTQKISPAGK
PKVQLQVVLHDGACSTFHFVNPAGAEAQAKDRDQVKMLLQNLLPKFKRQIDGELEMKSKL
LSLHPTLKHLYEDLVISKVINSEEYWNTPTLKHYTESTNMKQEAGVSGAFLADIQPQTDG
CNGLKYNLTQDIIDAIFKTYPAVRKKHVDYVPNKMTEAEFWTKFFQSHYFHRDRIMSSSS
KDLFGECAKLDDQAIASAMKHTTLDLTVDLPSFKEPIPLLPDDETHEKEKDGTSIHRNMI
KRFNQHSIMVLKASHKNSNSSSSKTNKVENGMKETNGVEKRPSADKDVTEPVDKKRRIME
KIHYEDLDNVDSNEDTQELKLSKVERYLLGPASQVGHTGTSSSNPPPLSALASVCQAWSS
GQQCSRPVRVSAAAAVGALGELSPGGALMRQHHAASMAQLVPPPARQELQRLYLSCGELL
RELWRCFPQPGAPPDDDAGTRAERFYDAIMRFRNLKLRPFEEKMLRDLTPLASSLTRHMN
QMIETACAKYAVWQQRQAKLR
NT seq
1686 nt
NT seq
+upstream
nt +downstream
nt
atgaccacatcgtcggaggacgttcttttgagtgtaggacatgtaaggtataaaaagggc
gatggcactttgtatgtgatgaaccaaagattggcttggatgcttgagaacaaggacact
gttgctgtctctcacaagtatgcagatataaaaactcaaaaaatctcaccagctggaaaa
ccaaaagttcaactacaagtggtgttacatgatggggcatgttccacatttcattttgtc
aatccggccggggcagaggctcaggctaaagacagggaccaagttaaaatgttattacag
aatctattacccaagtttaagagacagatagacggagagttggagatgaaatctaagcta
ctgtcgttacatcccacattaaagcatttatatgaagatttagttatatcaaaagttata
aatagtgaagagtattggaatacgccgacattgaaacattacacagaatctactaacatg
aaacaagaggccggcgtgtcgggtgcgtttctagccgatatacagccgcagactgatgga
tgcaatggacttaagtataacctgacgcaggacattatagatgccatattcaaaacatat
ccggcggttaggaagaaacatgtggattatgtgccaaataagatgacagaggctgagttt
tggacaaaattctttcaatcccattactttcatagagatcgtataatgtcgtcatcgagt
aaggacttatttggggagtgcgctaaacttgatgaccaagcgatcgcctccgctatgaaa
cacacaaccttggacttgactgtggatctaccctcattcaaagaaccaatcccactctta
cccgacgatgaaacacacgaaaaggaaaaagatggtacatcgatacacaggaacatgata
aaaagattcaaccaacactccataatggtgctaaaagctagtcataaaaattccaatagc
agtagtagtaaaacaaataaagtcgagaatggtatgaaagaaacgaacggcgtcgaaaaa
aggccgagtgcagacaaagatgtgacggagccggttgataagaaacgtaggataatggag
aagatacattacgaggacctggataatgtggatagcaatgaagatactcaggagttgaaa
ctgtcaaaggtagaacgatatctgttgggtccagcgtctcaagtgggtcacacaggaacg
agttccagtaatccaccaccactgtccgccctggcatctgtctgtcaggcgtggagtagt
ggtcaacagtgtagtcgccctgtccgcgtgagtgctgcggccgctgtcggagctctgggc
gaattaagcccgggaggagctctaatgaggcaacaccacgcggcgagcatggcccagctg
gtcccgccgcccgcccgccaggagctccagcgtctgtacctgtcatgtggcgaactgctc
cgtgagttgtggcgttgtttccctcagccgggcgctccgcccgatgacgacgccggcacc
agggcggagaggttctatgacgctatcatgaggttcaggaaccttaagctgaggccgttt
gaggaaaaaatgctacgtgacctgacaccgctggcgtcgtcattaacaagacatatgaat
caaatgatcgaaacagcctgcgccaaatacgctgtttggcaacagagacaagctaaactt
cggtag
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