Danaus plexippus (monarch butterfly): KGM_212149
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Entry
KGM_212149 CDS
T04344
Name
(GenBank) Poly
KO
K01148
poly(A)-specific ribonuclease [EC:
3.1.13.4
]
Organism
dpl
Danaus plexippus (monarch butterfly)
Pathway
dpl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dpl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
KGM_212149
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dpl03019
]
KGM_212149
Enzymes [BR:
dpl01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.4 poly(A)-specific ribonuclease
KGM_212149
Messenger RNA biogenesis [BR:
dpl03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
KGM_212149
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CAF1
NuBaID_C
Motif
Other DBs
NCBI-ProteinID:
OWR49885
UniProt:
A0A212F817
LinkDB
All DBs
Position
Unknown
AA seq
529 aa
AA seq
DB search
MDITNKNFNQEFDSIIKCLKKSCFIGFDAEFTAILSGECFKYRLFDTNKERYDRMKDEVC
KMIMNQVGLTMFQYDRDNDRYISHTYTFHLCPQVFGDINQSFTFQASAIRFLCLHNFDYN
KFTYDGLPYMSRSEEAHIKKQLKEKTLLNNLIQAMEMNDERKLQSYCSEVAKWLVNSTDD
TIYLDIDNPIMRYIVHCELRNRFPEVLTTDSLGNSHKVLIYRNGDVDGATSASMSTLEGN
LITYVLGFSQIIELLAEYKKPIIGHNMYLDTLLLHSQFIGPLPKRYSAFKKNINNLFPNM
YDTKYISHEMGRKLTLDEVWKSNALQDLYEFFYEGKCKKLQKGLSQIKLNTPFDVKQSYH
EAGWDSYCSGYCFIRLGEWSSTDHRGTARPASPNEIISSLSSYCNKVNVIRSAVAYMNLI
DEDPPSHRPELLHIRSLREPAIRMSQVSSLLSGFGALDIKPYGARTALIAAGTHHTANKL
LRHFNHHEDYRITPFKPFRHSPTGRLAIWGGALITGTIVIYFIHKKVNK
NT seq
1590 nt
NT seq
+upstream
nt +downstream
nt
atggatataacgaacaaaaactttaatcaagaatttgatagcataatcaaatgtttgaaa
aagtcttgtttcattggctttgacgcagaatttacagctatattatcgggagaatgtttt
aaatatagattgttcgatactaataaagaaagatatgaccgaatgaaggatgaagtctgt
aagatgataatgaatcaagttggtctaacaatgtttcagtatgatcgggataatgacaga
tatatctcccatacctacacattccacctctgtccccaagtatttggtgacatcaatcag
tcctttacattccaagcatcagccattagattcctttgtctgcacaattttgattataac
aagtttacatatgatggtctcccctatatgagtcgatccgaagaagctcatataaagaaa
cagctgaaggaaaaaacacttcttaataatctgatacaagcaatggaaatgaatgatgag
aggaaacttcaaagctactgttccgaagtcgctaaatggctcgtaaatagtactgatgac
acaatatacctggatattgacaatcccataatgagatacatagtgcactgtgaattgagg
aatcgcttcccagaggtcctgacaactgatagcttaggtaatagtcataaggtcctgata
tatagaaatggtgacgtagatggcgccaccagcgcttctatgtcaacactagaaggaaac
ctaataacttacgtcctaggtttctcacaaatcatagagcttctagcggaatacaagaaa
ccaatcatcggccacaacatgtacctagacacattattactacacagccaattcataggt
ccgttgcctaaaagatattctgcatttaagaagaatattaacaacctatttcctaatatg
tatgacaccaagtacatctcacacgaaatgggcaggaagctgacactcgatgaagtatgg
aagtctaatgcactgcaagatttatatgaattcttctatgagggtaaatgtaagaagttg
cagaagggtttaagtcaaataaaactgaatactccatttgatgtgaaacaatcatatcac
gaggccggttgggattcatattgctcaggttactgcttcatccgcctgggcgagtggtcg
tccacagatcaccggggtacagctcgcccagcatcccccaatgaaataatctcatcactc
tcatcatactgcaacaaggtcaacgtcatacgatccgctgtggcttatatgaatctcatt
gacgaggacccaccaagccatagaccagagctacttcacattagatctttgagggaacca
gcaatacgtatgagccaggtgtcgtctctactgtctggtttcggtgctttggatataaag
ccttacggagcaagaaccgctttgatagcggctggaacacatcacactgccaacaaatta
ttacgacacttcaatcaccacgaggactataggatcactccgttcaagcccttccgacac
tcaccaacgggtcgcctcgcaatttggggaggtgcattaatcacgggtaccattgtcata
tacttcatacataaaaaagtcaacaagtaa
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