Danaus plexippus (monarch butterfly): KGM_214457
Help
Entry
KGM_214457 CDS
T04344
Name
(GenBank) putative ATP-dependent RNA helicase
KO
K12820
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:
5.6.2.6
]
Organism
dpl
Danaus plexippus (monarch butterfly)
Pathway
dpl03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
dpl00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
KGM_214457
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
dpl03041
]
KGM_214457
03009 Ribosome biogenesis [BR:
dpl03009
]
KGM_214457
Enzymes [BR:
dpl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
KGM_214457
Spliceosome [BR:
dpl03041
]
Complex A
U2 snRNP components
U2 related factors
KGM_214457
Complex B
KGM_214457
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
KGM_214457
Ribosome biogenesis [BR:
dpl03009
]
Eukaryotic type
90S particles
Helicases
KGM_214457
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
HA2_N
Helicase_C
DEAD
AAA_22
AAA_19
nSTAND3
SRP54
AAA_25
ABC_tran
Flavi_DEAD
AAA_30
T2SSE
TsaE
AAA_7
Motif
Other DBs
NCBI-ProteinID:
OWR51233
UniProt:
A0A212FBX8
LinkDB
All DBs
Position
Unknown
AA seq
736 aa
AA seq
DB search
MSKRRIEVMDPFIKKKREEKAAAAAKAGGSEASESTTAATTPGTPSSTPASTPGLNPYTG
LPHSPRYHELLRRRLGLPVWEYKNDFMRLLNTHQCVVLVGETGSGKTTQIPQWCVEFAAV
TGGQAHGVACTQPRRVAAMSVAQRVAEEMDVALGQQVGYSIRFEDCSGPQTVLKYMTDGM
LLREGMSDPMLEQYRVILLDEAHERTLATDILMGVLKEVIKQRSDLKLVIMSATLDAGKF
QLYFDNAPLMNVPGRTHPVEIFYTPQPERDYLEAAIRTVIQIHICEEVAGDILLFLTGQE
EIEDACKRIKREIDNLGPDVGELKCIPLYSTLPPNLQQRIFEPAPPNRPNGRIGRKVVVS
TNIAETSLTIDGVVFVIDTGFSKQKVYNPRVRVESLLVSPISKASAQQRAGRAGRTRPGK
CFRLYTEKAYKDEMQDNTYPEILRSNLGSVVLQLKKLGIDDLVHFDFMDPPAPETLMRAL
ELLNYLAALDDDGNLTDLGAVMAEFPLDPQLAKMLIASCNHNCSNEILSITAMLSVPQCF
VRPNEVRKAADEAKMRFAHIDGDHLTLLNVYHAFKQNMDDPHWCYDNFINYRSLKSGDNV
RQQLSRIMDRFNLKRTSTEFTSKDYYINIRKALVNGFFMQVAHLERTGHYLTVKDNQQVQ
LHPSTCLDHKPDWVIYNEFVLTTKNYIRTVTDIKPEWLLRIAPQYYELSNFPPCEARRQL
ELLQARLDSKLYQEGF
NT seq
2211 nt
NT seq
+upstream
nt +downstream
nt
atgtctaagagaaggattgaagtgatggatccgtttattaagaaaaaaagagaggagaaa
gcggcggcagcagctaaggctggcggcagtgaggcctcggagtcgacgacagcagccacg
acgcccggcacaccctccagcacacccgccagcacgccggggttgaacccatacacaggt
cttccccactcccctcgctaccacgagctgctgaggcgacgtctcggcctgccggtgtgg
gagtacaagaacgacttcatgagactgttgaatacacaccagtgcgtggtgctggtcgga
gagaccggctcggggaagaccacgcagataccgcagtggtgcgtcgagtttgctgccgtg
accggcggacaggcacacggggtggcctgcacccagccccgcagggtggccgccatgtcc
gtggcacagagagtggccgaggagatggacgtggcgctggggcaacaggtcggctacagc
atacggttcgaggactgttcgggaccgcagaccgtactgaagtatatgacggacggtatg
ttgctgagagagggaatgtccgaccccatgctggagcagtacagggtcatactgctggac
gaggcgcacgagaggaccctcgccaccgacatactgatgggggtgctcaaagaggtcatc
aagcagaggtccgacctcaagctcgttatcatgtcggccacgctggacgcgggcaagttt
caactgtacttcgacaacgcacccttgatgaacgtaccggggcggacacatcccgtcgag
atcttctacacgccgcagcccgagagggactacctggaggcggccatacggaccgtcata
cagatacacatctgcgaggaggtggccggggacatactcttgttcctgaccggtcaggag
gagatcgaggacgcctgcaagaggataaagagagagatagacaacctaggaccggacgtc
ggcgaactcaagtgtataccgctgtactcgacgctgccgcccaatctgcagcagaggata
ttcgagccggcgccccccaacaggccgaacggcaggatcggcaggaaagtggtggtctcc
acgaacatagcggagacctcgctcaccatagacggcgttgtgttcgtcatagacacgggc
ttctccaaacagaaggtttacaacccgcgggtgagggtggagtctctgctggtgtctccc
atcagtaaggcctcggcccagcagcgagcgggccgagcgggccggaccaggccggggaag
tgcttcaggctgtacacggagaaggcctacaaggacgaaatgcaagataacacatacccc
gagatcctgagatcaaacttaggatctgtagttttgcagttgaaaaagctgggcatcgat
gacttggtgcactttgacttcatggacccgccggcgccggagacgctcatgcgcgcgctg
gagttgctcaactacctggccgcgctcgacgacgacggcaacctgaccgacctgggcgct
gtgatggcggagttccctctcgaccctcagctggctaagatgttgatcgccagctgtaac
cacaactgttccaacgagatactctccatcaccgccatgctgtcagtcccgcaatgcttc
gtgcgtcccaacgaagtaaggaaggctgcggacgaggccaagatgaggttcgctcacatc
gacggtgaccacctcacgctgctgaacgtgtaccacgccttcaagcagaatatggatgac
ccccactggtgttacgacaacttcatcaactacaggtcactcaagtctggtgataatgtc
cggcaacaactcagcaggatcatggacaggttcaacttgaagaggaccagcaccgagttc
acaagcaaagactactacattaatataaggaaagctctcgtcaatggcttctttatgcaa
gtggcgcacctagagcggaccggtcactacctgacggtgaaagacaaccagcaggtccaa
ctgcacccctccacgtgtctagaccacaagcccgactgggtcatatacaacgagttcgtg
ctcaccaccaagaactacatacgaacagtcaccgacatcaaaccggagtggttgctccgg
atcgccccgcagtactatgagttgtccaacttcccgccgtgcgaggcgcggaggcagctg
gaactgctgcaagcgaggctcgattccaaactgtaccaggaggggttctag
DBGET
integrated database retrieval system
