Danaus plexippus (monarch butterfly): KGM_215625
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Entry
KGM_215625 CDS
T04344
Name
(GenBank) Upf3 regulator of nonsense transcripts protein B
KO
K14328
regulator of nonsense transcripts 3
Organism
dpl
Danaus plexippus (monarch butterfly)
Pathway
dpl03013
Nucleocytoplasmic transport
dpl03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
dpl00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
KGM_215625
03015 mRNA surveillance pathway
KGM_215625
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dpl03019
]
KGM_215625
Messenger RNA biogenesis [BR:
dpl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
KGM_215625
mRNA cycle factors
P-body specific factors
KGM_215625
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Smg4_UPF3
Motif
Other DBs
NCBI-ProteinID:
OWR47717
UniProt:
A0A212F1V3
LinkDB
All DBs
Position
Unknown
AA seq
608 aa
AA seq
DB search
MTEDRDVKDSQTDTGNKTFINKSKDKKAKPHRPLTKIILRRLPPTMTEEAFLEQVSPIPE
HDHFYFAKPDNSLGNNVYSRAYINFVNVDDIYLFRDKFDGYVFLDEKGVEYVGIVEYAPF
QRIPKKKKKKDPKCGTIESDPIYQEFVENLSKEQETDNQPKLEYSYPVNDNNDKKNQSTP
LLEYLAARKQDKRGRDERRRRENDKRKMRIERKTKDSTIKRQEDLSEDDGCDYDYYDNRQ
NCWYGEQRIYHKSKIKHNYNNDIKTQGSDETINTDSDWDSHFPALMKTHNTFTITCNLTS
DKRYQCEANKKSAGDTYYKEEDFVENDIRKIKSREWDKEKADTKEDQVKSDKDVFEYKTY
REQRKAASTSVIDKKKKLDVDKKDYSKDDEQLDGYDKYKKEKRTEKVKESPRETKSKKYS
DTRKERLKQAEMGKTEKQTAINKIISSEGKSKSLNHDDIKPFTQLPQVKTDDLTKIIEDM
DRKIKLDEADSKTFDKNDKVEPEPQDAEDVAITRRNSLDSGDISRKDESTLKRQKSLDDR
SKSTDREGSEEKEKSESGDRRTERRIRNKDRPSLVIYQPGMGKFSKQRLAKEKDVPSTKT
VCDEKRDT
NT seq
1827 nt
NT seq
+upstream
nt +downstream
nt
atgactgaggaccgagatgttaaagattcgcaaacggatacaggcaataaaacgttcata
aataagagtaaggacaaaaaagctaaaccacatcgaccgctgacaaaaatcatcctccgt
cggctgccaccaacgatgacagaagaagcttttctagaacaagtctctcctattcctgaa
cacgatcatttttatttcgccaaacccgacaactctcttggaaacaatgtgtattcaaga
gcctatataaattttgtgaatgtcgacgatatttacctatttagagataagtttgatgga
tacgtatttcttgacgaaaaaggtgttgaatatgtaggcattgtggaatatgcgcctttt
caaaggatccctaagaagaaaaagaagaaggatcccaagtgtggtactatagaaagtgac
ccaatctatcaggagtttgtggagaatttgagtaaagaacaagagactgataatcagcct
aaattggaatactcctaccctgtgaatgataataacgataaaaagaatcaatcaacaccc
ttactggagtatcttgctgctcggaagcaagataagagaggacgtgatgaaagacgtagg
agagaaaatgacaaacgtaaaatgagaattgagagaaagacgaaagattcaaccataaag
agacaggaagatttatcagaagacgatggttgtgattacgattattatgacaatagacag
aactgttggtacggggaacaaagaatataccataaaagtaaaattaaacataattataat
aatgatattaaaactcaaggatcagatgaaactatcaacactgattccgactgggacagc
cacttccccgctttgatgaaaacccataacacattcactataacatgtaacttaacaagc
gataaacgttaccaatgtgaagctaataagaaaagcgctggcgacacttattataaggaa
gaagactttgtcgagaatgacataaggaaaatcaaatccagagaatgggataaagagaaa
gctgatacaaaagaagatcaagttaagtctgataaagatgtgttcgaatacaaaacctat
agggaacagcgtaaagccgcctccaccagcgttattgacaagaagaagaaattggatgta
gacaaaaaagattacagcaaagatgacgaacagttagatggttacgataaatataaaaaa
gaaaagcgcacagagaaagttaaagagtcaccgcgagagacgaaaagcaagaaatacagt
gacaccagaaaggagagattgaagcaggcggagatgggaaagacggagaaacaaacagca
atcaataagatcatatcgtcagaagggaaaagtaaatcactcaatcatgacgacatcaaa
cctttcactcagctacctcaagtgaaaactgatgatctgaccaagatcatagaagatatg
gatcgaaaaattaaattagacgaagctgactctaaaacttttgataagaacgacaaagta
gagccggaaccacaggatgcggaggatgttgctataacgagacgcaacagtctagattca
ggggacatttcaaggaaggacgagtctacactgaagagacagaagtctctagacgatagg
agcaaatctacagacagagagggatcagaagagaaagagaaaagtgagagtggagataga
cgcaccgagagaagaataaggaataaggaccgtccgagtcttgttatatatcagccgggt
atgggaaagttcagtaaacagcggctcgctaaagaaaaggacgttccatcaacaaaaaca
gtctgcgatgaaaagagggacacttga
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