Danaus plexippus (monarch butterfly): KGM_215771
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Entry
KGM_215771 CDS
T04344
Name
(GenBank) superkiller viralicidic activity 2 2 isoform 1
KO
K12598
ATP-dependent RNA helicase DOB1 [EC:
5.6.2.6
]
Organism
dpl
Danaus plexippus (monarch butterfly)
Pathway
dpl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dpl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
KGM_215771
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dpl03019
]
KGM_215771
03041 Spliceosome [BR:
dpl03041
]
KGM_215771
03009 Ribosome biogenesis [BR:
dpl03009
]
KGM_215771
03016 Transfer RNA biogenesis [BR:
dpl03016
]
KGM_215771
Enzymes [BR:
dpl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
KGM_215771
Messenger RNA biogenesis [BR:
dpl03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
TRAMP complex
KGM_215771
Spliceosome [BR:
dpl03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
KGM_215771
Complex C
U4/U6.U5 tri-SnRNP related factors
KGM_215771
Ribosome biogenesis [BR:
dpl03009
]
Eukaryotic type
Pre-60S particles
Helicases
KGM_215771
Transfer RNA biogenesis [BR:
dpl03016
]
Eukaryotic type
tRNA degradation factors
TRAMP complex
KGM_215771
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DSHCT
MTR4_beta-barrel
DEAD
MTR4-like_stalk
DEXQc_Suv3
Helicase_C
ResIII
ATPase_2
Motif
Other DBs
NCBI-ProteinID:
OWR42365
UniProt:
A0A212ELK2
LinkDB
All DBs
Position
Unknown
AA seq
1036 aa
AA seq
DB search
MSDINSLFDCFEEPALNEAATQLPNVKSEEEAPVTKTEDVKKEETIEASPSNKRPHEEVK
YADTSKKPRQEEEDDADIISDINLNNLGARILIHTLDTHEGCTHEVAIPPNQEYAQLMPI
TSEPAKQYSFILDPFQKEAIMCIDNLQSVLVSAHTSAGKTVVAEYAIALSLKNKQRVIYT
TPIKALSNQKYREFSEEFHDVGLITGDVTINPSASCLIMTTEILRNMLYRGSEIMREVGW
VVFDEIHYMRDKERGVVWEETLILLPDNVHYVFLSATIPNARQFAEWVCRLHSQPCHVIY
TEYRPTPLQHYIFPASGDGIHLVVDEKGQFKEDNFNTAMTVLSNAGGASAGGERGRRGGL
KGGSSSIFNIVKMIMERNFAPVIIFSFSKKDCELYAMQMAKLDFNTIEEKKLVDEVFNNA
MDVLSEDDRKLPQVENVIPLLRRGIGIHHGGLLPILKETIEILFGLGLIKALFATETFAM
GLNMPARTVVFTNCQKFDGKDFRFITSGEYIQMSGRAGRRGLDDKGIVILMIDQKVTPSV
VKSMVQGKADPINSAFHLTYNMVLNLLRVEEINPEYMLERSFYQFQNQAVIPDLIDKVKA
KQKEYSALSIEEEHSIASYCNIRSQLELLGSQFRSFITKPEYIKPFLQPGRLVKVKTEKY
EYDWGIIVNFKHKTGKSKKDENPLTADTVIVVDVLLHVKKSKADEADTNVPCPPGETGDV
EVVPILHTLIYQISSLRVYYPKDLRPPDNRKSVLKTIGEVKKRFPEGPPLLNPIKDMKIE
DSVFKECVERIKLLEERLYSHPLHNDKNRGALTAAYDAKQEIYEELTLAKSELRRAKSIL
QMDELKKRKRVLRRLGYCTLSDVIELKGRIACELSSADELLLTELIFNGVFNNLSAEQSA
ALVSCFVCDENSTQTSATGEELRGVLRQLQEYARRIAKVSIDAKMDLDEDEYVGKFKCTL
MDVVLAWAKGASFLQICKMTDVFEGSIIRCMRRLEEVLRQLCQAAKNIGNTDLENKFSDA
IKMLKRDIVFAASLYM
NT seq
3111 nt
NT seq
+upstream
nt +downstream
nt
atgtcagatataaatagtttatttgattgcttcgaagaaccagctttaaacgaagctgcc
acccaattgccaaatgttaaaagtgaagaagaagcgcctgtaaccaagacggaagatgtt
aaaaaagaagaaactatagaagcttcgcccagtaataagcgtccacatgaagaagttaag
tatgcagatacttctaagaagcccagacaagaagaggaagacgacgccgatattataagc
gacattaacctcaacaatcttggtgcaaggatacttatacacactcttgatacacacgaa
ggctgtacacatgaagtggcgatacctcccaatcaggaatatgctcaactaatgccaatt
acttcagaaccagctaagcaatacagttttatcctggatccgttccaaaaggaagctatc
atgtgcattgacaacttacaatcagtacttgtatcagcacacacatctgccggaaagact
gttgttgcagaatatgctatagctctgtcactaaaaaacaaacaaagggttatttacaca
acacccatcaaggctctctctaatcagaaatacagggaattctctgaggagtttcatgat
gtgggtctgattactggagatgttactatcaatccatccgcttcctgtttgataatgaca
actgagattctaagaaatatgttatatagaggttcagagataatgagggaagttggttgg
gttgtgttcgacgagattcattacatgagggacaaggaaagaggtgttgtttgggaagaa
acacttatcttgctacccgacaatgttcactatgtatttttatcggctactatacccaat
gctcgtcagtttgctgagtgggtgtgtcgacttcactctcagccgtgtcatgttatatac
actgaatacagacccacacccctccagcattatatattccctgctagcggagacgggatt
catcttgttgtggatgaaaagggtcaattcaaagaggacaacttcaatacagctatgacg
gtgttgagtaacgcgggcggggcgtcggcggggggtgagcgcggccggagggggggactc
aagggggggagcagtagtatctttaatatagtcaaaatgatcatggagagaaacttcgca
ccggtgattatattcagtttcagtaagaaagactgcgagctgtatgctatgcagatggct
aaattggattttaatacaattgaagagaaaaaacttgtagacgaggttttcaacaacgcg
atggacgttctatctgaagacgatcgtaagttaccgcaggttgaaaacgtgatacccttg
ttgaggagaggcatcggtatacatcacggaggactgctgcccatactgaaagaaaccata
gaaatattgttcggcctggggcttatcaaggcgctgttcgccaccgagaccttcgccatg
gggctcaacatgcccgctaggactgttgtgttcacaaattgccagaagtttgacggcaag
gacttcagatttataacttccggtgaatacatccagatgtcaggtagagctggtcgtcga
gggttggacgataaaggtatcgtcatactgatgatcgatcagaaggttactcccagtgtc
gttaagtccatggtacagggcaaagctgatcctataaattccgccttccatcttacatac
aacatggtcctgaatttattaagagttgaagagataaacccggagtacatgttggagagg
agtttttatcagttccaaaaccaagctgttatcccagacctcatcgacaaggtgaaagct
aagcaaaaggaatatagcgcgttgtcaatagaggaggagcactctatagcttcatactgt
aatataaggtcacagttggagctgctggggtcacagttcaggtcgttcatcacgaagccg
gagtatatcaagccgttcctccagcccggtagacttgttaaggtgaaaacggaaaaatac
gagtacgattggggcattatagtgaactttaaacacaaaaccggcaaaagtaagaaagac
gagaaccccctgaccgcggacaccgtcatagtggtggacgtgttgctgcatgttaagaaa
tcaaaagccgacgaggccgacacgaacgtgccttgtcctcctggagagaccggcgacgta
gaggtggtgccgatcctacacacgttaatatatcagataagttcgctgcgggtgtactat
cccaaagacctgcgaccgcccgacaacaggaagtcggtgctgaaaactataggggaggtc
aagaagcggttcccggaaggaccgccgctactgaatcccatcaaggacatgaaaattgag
gactctgtgttcaaggaatgcgtcgagagaatcaagttgttagaggaaagattatactct
caccccctccacaacgacaagaaccgtggcgccctgacggcggcttacgacgccaaacaa
gaaatatacgaagagctgacgttagccaagtccgagttgaggagggcgaagagcatctta
cagatggacgaactgaagaagaggaagcgagtgctgaggcgactcgggtactgcacgctg
tcagacgtcatagagctcaagggcaggatagcctgcgaactcagcagtgcggacgaactg
cttctgaccgagttgatcttcaacggtgtgtttaacaatctgtccgcggagcagagcgcg
gcgctagtgagctgcttcgtgtgtgacgagaacagcactcagacgtccgccacgggcgag
gagctgagaggcgtcctgagacaactacaggaatacgcgcgtagaatagcgaaagtatca
atcgacgcgaagatggatctcgacgaggacgagtacgttggaaaattcaaatgtaccctc
atggacgtagtactcgcgtgggcgaagggcgcctccttcctacagatatgcaagatgact
gacgtctttgaaggttcaataattcgttgtatgcgtcgcctggaggaggtactccggcag
ttgtgtcaggccgccaagaacatcgggaacacggacttggagaataagttcagcgacgcc
atcaaaatgctgaagagagacatagtgttcgcggccagcctttacatgtag
DBGET
integrated database retrieval system
