Dolosigranulum pigrum: FNV33_00090
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Entry
FNV33_00090 CDS
T06088
Name
(GenBank) RNA-binding transcriptional accessory protein
KO
K06959
protein Tex
Organism
dpm
Dolosigranulum pigrum
Brite
KEGG Orthology (KO) [BR:
dpm00001
]
09190 Not Included in Pathway or Brite
09192 Unclassified: genetic information processing
99973 Transcription
FNV33_00090
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Tex_YqgF
Tex_central_region
Tex_N
HHH_3
S1
HHH_9
YqgF
S1_RRP5
HHH_7
T2SSK
ATP-synt_ab_C
DUF58
HHH_6
TMF_TATA_bd
Motif
Other DBs
NCBI-ProteinID:
QDO90531
UniProt:
A0A516GG85
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Position
complement(20199..22376)
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AA seq
725 aa
AA seq
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MEDKQTFQLIVRELSDYSTKQVRTVLSLLDDGNTVPFIARYRKDQTGALDEVQIREIQQR
SEYIQNLQDRKETVLSAIEEQGELTDELAAEIREATQLQEVEDLYRPYKKKRQTLATKAK
EAGLEPLADWLLGFPDASEAEIEAVASDYLNSEYDVETVADALAGAHEIIAEQVADNPEY
RKRLRDYTIYNAQITSTVKNEEIDEKNVFQQYYEYAEDYRKIAPHRTLALNRGESEEVLT
VKLEVGDERAHRYLYKQILPSLASSSPIISIVKEAIKDAYKRFIAPSIERELRSTLTEKA
ETHAIQIFGENLKNLLMQAPLKQKTILGLDPAYRSGCKLAVIDSTGKVLAIKVIYPHTSG
ETKRNQSKEALKQLITEHAVDVIAIGNGTASRESEQFVAEVVSEMPEKTAFIIVNEAGAS
VYSASDEARREFPDLAVEERSAISIARRLQDPLAELVKIDPKSIGVGQYQHDVSQKELEG
QLDFVVETAVNQVGVNLNTASGALLEHVSGLTKTAANNIVAYRESEGQFTTRDQIKQVKR
LGPKSYQQAVGFLRIPDAPEPFDQTGIHPESYTEAEKILAHVKQDKSAIGSDELKHLLEQ
LPDIQTAEQLEIGLETYRDIVAALIAPGRDARDDMPAPILSTDVLKMDDLREGMQLQGTV
RNVVDFGAFVDIGVKEDGLVHISELSDQFVEHPKDVVQVGDIVTVWIKSIDLDRSRIGLT
MIQKD
NT seq
2178 nt
NT seq
+upstream
nt +downstream
nt
gtggaagataagcagacgtttcaactaattgtacgggagttaagtgattattcgactaaa
caagtgcggacagtattgtcgctcttggacgatgggaatacggtgccgttcattgcacgt
taccggaaggatcagacgggggcgctcgatgaagtccaaattagagagatccaacagcgc
agtgaatatatccaaaacttacaagaccgtaaagagaccgtcttaagtgcgattgaggag
cagggggaactgacggatgaactagcagcggaaatccgagaggcaacgcaactacaagaa
gtagaagacttgtatcggccgtataagaagaagcgtcagaccttggctactaaggcgaaa
gaagcaggcttagaaccattagcagactggttgctgggtttccctgatgcaagtgaggca
gagattgaagcggtagcaagtgattatcttaattcggaatatgatgttgagactgtagcg
gatgcgttggcaggagctcatgaaattattgctgagcaggttgctgataatccagaatat
cgcaagcgtctgcgcgactatacaatctataacgctcagataactagtacggtgaagaat
gaggagattgatgagaagaatgtcttccaacaatactatgagtatgcagaggattatcgg
aaaattgcccctcaccgaacactcgcattgaaccggggagagagtgaagaggttttaacg
gttaagttagaggtcggtgacgagcgagcgcatcggtatttatacaaacaaatattacct
agtctggctagttcatcgccaataatctctatcgtgaaggaagcgatcaaagatgcgtat
aagcggtttatcgcaccatccatcgaacgtgaattgcgtagtacattgacggagaaagca
gagactcatgcgattcagattttcggcgagaacttgaagaacttactgatgcaagcaccg
ctgaagcagaagacgatcttagggctggatccagcttatcggtcagggtgtaagctagcg
gtgattgattcgacaggaaaagtgttagctattaaagtgatttatccgcatacatctggt
gaaacaaaacgtaatcagtcgaaagaagcactgaagcaattgatcacggaacatgcagta
gatgtgattgctattgggaatggtacggcgagtcgtgagtcagagcagttcgtggctgaa
gtggtgagtgagatgccagagaagacagcttttattattgtgaatgaggcgggtgcttca
gtgtactcagccagtgatgaagcgcgccgtgagtttcctgatctagcagttgaggaacgt
tcagcgattagtattgctcgtcgtctgcaagatccattagcagaattggtcaagattgat
cccaaatcaatcggtgtcggccaatatcaacatgatgtgtcacaaaaagaattagaaggt
cagctagattttgttgtcgagacggcggttaaccaagttggtgttaacttaaatacagca
agtggtgcgctactcgaacatgtctctggtttgacgaagacagcggctaataatattgtc
gcctaccgtgagtcagaggggcagttcactacgcgtgatcaaattaaacaagtgaaacgc
ttgggaccaaaatcttatcagcaagcagtcggttttttacgtattccggatgcacctgag
ccgttcgaccaaacgggtatccaccctgaatcttatactgaagctgaaaaaatattagcc
catgtgaagcaagataagtcagctatcgggtctgatgagttgaagcacttgctggaacaa
ttgccagacatacagacagctgagcaattagagattggtttagagacatatcgtgatatt
gtggcagctttgattgcgccgggacgagatgcacgtgatgatatgccggccccgattcta
tcgacagatgtactgaagatggatgacttacgcgaagggatgcaactgcaagggacggtt
cgtaatgtagttgattttggtgcatttgtggatattggagtgaaggaagatggcttagtt
catatttctgagctaagtgatcaatttgtcgaacatccgaaagatgtcgttcaagtgggc
gatattgttacagtttggattaaatcgattgatttggaccgtagccggattggtttaacg
atgatacagaaagattag
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