Dolosigranulum pigrum: FNV33_00605
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Entry
FNV33_00605 CDS
T06088
Name
(GenBank) ABC transporter substrate-binding protein
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
dpm
Dolosigranulum pigrum
Pathway
dpm02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
dpm00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
FNV33_00605
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
dpm02000
]
FNV33_00605
Transporters [BR:
dpm02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
FNV33_00605
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
DUF3909
PCF11_RFEG_rpt
Motif
Other DBs
NCBI-ProteinID:
QDO90627
UniProt:
A0A1S8KPN5
LinkDB
All DBs
Position
118844..120421
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AA seq
525 aa
AA seq
DB search
MKKKLLGLLGAGALLLAACGGADQPAKESADGTVDESQVRPEMRVAINSEPPTLDPARTV
STASIGVTMHIYETLYTFDENFESQPVLADSYEVNDDNTKYTFKLKEGINFHDGSEMTAE
DVAASMNYWKADTSKAADLLPEGDFEVVDDYTVEVEFVEPNTELLTLMSSITYFPAIRPS
EAFDGEIAESGIDDNFIGTGPYEYVDWVHDQYVEVKRFDNYHNQVTGEPSRFAGEKRAPT
ETIRFEIVGDVGTRMAGLLSEEYDVGEVPVTNLDQVDATDYLNYAAPGGGTLVAQLNVEE
GPLLDDKLRQAILTGINNNDIMLAALDNEEFYEVSSSYVSPETPYYTETSSEFYNANDQE
KAKKLIEESGYNGEEIRIVTTPEYDSMYSASIALQDQLVELGLNAVVNQYDFNTFNEYTS
DPSGHEIYIVSHSFQPSPQQVLTLSTDRWGGDMDEQAQELIDAMRAAEDEAATKEAFAEL
QDFLYTDYIPGFVIGHYNNFVTYNSAVEGFDYWKAPILWNAGHVE
NT seq
1578 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaagaaattgctagggttgttaggagccggcgcattattgttggcagcatgtggc
ggtgcggaccagccagccaaagagtcagcagatggaacagttgatgagagtcaagtgaga
ccggaaatgcgagtggctattaattcagagccgcccacactggacccggcacgaacagtg
tcaacggctagtattggagtgacaatgcatatttatgagacattatatacatttgatgaa
aatttcgagtctcagcctgttttggcagatagttatgaagtgaacgatgataacacaaaa
tataccttcaaactgaaggaaggaattaacttccatgatgggagcgagatgacggctgaa
gatgtagcagcatcgatgaactattggaaagctgatacatcgaaggcagcggatctcttg
ccagaaggagatttcgaagtggttgacgattatactgtagaagtggaatttgtcgaaccg
aatacagaattactcactttaatgagttcgatcacatacttcccagctatccgcccatcg
gaagcattcgatggtgaaattgctgagtctggtattgatgataacttcatcgggacgggt
ccttacgaatatgtggactgggtgcacgatcaatatgttgaagtgaaacgctttgataat
tatcacaatcaagtgacgggtgaaccatcacgctttgcaggtgagaagcgcgcaccaact
gagacgattcgttttgaaattgttggggatgtgggtacccgtatggccggtctattgtca
gaagaatacgatgtcggtgaagtaccggtgactaacttagaccaagtggatgcaactgat
tacttgaattatgcagcaccgggtggcggaactttagtggctcaacttaatgtagaagaa
ggcccactcttagatgacaagttgcgtcaagccatcttgacaggaattaataataatgac
atcatgttggcagcgttagataatgaagaattctacgaagtgtcaagttcttacgtatct
ccagaaacgccttactacacggagacaagttctgagttctataatgccaatgaccaagaa
aaagcgaaaaaattaattgaagaatctgggtataatggcgaagaaatccgtattgtgaca
acacctgaatatgattcgatgtattcagcgagtattgcgcttcaagatcaattggttgaa
ttgggcttgaatgccgttgtgaatcaatatgacttcaatacgttcaatgaatatacgagt
gacccaagtggacatgagatttacattgtgtcacacagtttccaaccttcaccacaacaa
gtcttgaccctaagtactgatcgttggggtggcgacatggatgagcaagcacaagagtta
attgatgcgatgcgtgcagctgaagatgaagccgcgaccaaagaagccttcgccgaattg
caagatttcttgtacacggattatattccaggatttgttatcggtcactacaacaacttt
gtaacctacaatagtgccgttgaaggattcgattattggaaagcaccaatcttatggaac
gcaggacatgtcgagtaa
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