KEGG   Dolosigranulum pigrum: FNV33_02525
Entry
FNV33_02525       CDS       T06088                                 
Name
(GenBank) MBL fold metallo-hydrolase
  KO
K12574  ribonuclease J [EC:3.1.-.-]
Organism
dpm  Dolosigranulum pigrum
Pathway
dpm03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:dpm00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    FNV33_02525
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:dpm03019]
    FNV33_02525
Messenger RNA biogenesis [BR:dpm03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     FNV33_02525
SSDB
Motif
Pfam: Lactamase_B_2 Lactamase_B Anti-Pycsar_Apyc1
Other DBs
NCBI-ProteinID: QDO90976
UniProt: A0A516GHL0
LinkDB
Position
500417..501718
AA seq 433 aa
MSWMTIHSGLERIGGNIVEIATERVRVLTDFGVGIGDSDVSDEHQMSDLEQHLLDGSLPR
IEGVFETDQFQRVTLADRQTDQRPLVVILSHLHIDHMGGLIYLPSDATVYMSESTWRLYQ
QLIQLGLEQLPACQMVPVNEDEWIDVEDISFCLKKSDHDVPGVVSIWLETPDAKLIHSGD
FRLHGTSPEDVLDWARAAHEWQPDILLIEGTTYSKGTDEGKVDSQEESNKTRLYLDSEAA
LVAEFKQLLKQQDQLIAINLYERNIERIVALHRAAQQLDKTFVMETAIAQLVRAFYPDEK
IVEWSPAVRDEILTQPSKFILQNSYAHIDRLAEIGAGLYLHSNGTPLGDYDPEYAQMLSQ
VEAAGFEFQRFAVSGHATPEDILTIAKTVDATWTIPWHTFNPERLEQALEAIGLQPFMPS
CQHSYDLAKGLYE
NT seq 1302 nt   +upstreamnt  +downstreamnt
atgagttggatgacgattcatagtgggttagagcgaataggtggtaatattgttgaaata
gcaacagagcgtgtgcgcgtattgaccgattttggggtgggcattggcgattcagatgta
tcagatgagcaccaaatgagtgacttggaacaacatcttttggatgggtcactgcctcga
atagagggagtatttgaaacagatcaatttcaacgtgttactttagcggatcgtcagacg
gatcaacggccgctggttgttattttgtcacatttacatattgatcatatgggtgggtta
atttatttgccgagtgatgcgacggtgtacatgagtgaatcgacttggcgcttatatcag
cagcttattcaattaggactggaacaactccctgcttgtcagatggttccagtgaatgaa
gatgagtggattgacgttgaagatatttctttttgtctgaagaagagtgatcatgatgta
ccgggagttgtatcgatttggttagagacaccggatgctaagctgattcattcaggtgat
tttcgcctgcatggtacgtcgccggaggatgtgctggattgggcacgagcagctcatgag
tggcaaccggatattttactaatcgaagggacaacttattctaaaggtaccgatgaaggc
aaggttgacagccaagaagaatcgaataagacacggctttatttggattccgaagcagcc
ttagttgcggagtttaagcaactcttaaaacaacaagatcaactgatagcaatcaactta
tatgaacgaaatattgagcgaattgtcgcacttcatcgggcggcgcagcaattggataag
accttcgtgatggaaacagccattgcccagcttgttcgtgcgttttacccggatgagaag
attgtggaatggagtcccgcagtgagagatgagatattaactcagccatctaagtttatt
ttgcaaaatagctatgctcatatagatcgcttagcggaaataggtgcgggattatatttg
catagtaatgggacacctctgggagattatgaccctgaatacgcgcagatgctgagccaa
gtggaggcagcagggtttgaatttcaacgctttgcggtcagtggtcatgcgacaccggaa
gatattttaaccattgctaaaaccgttgatgcgacgtggacaattccgtggcatacgttc
aatcccgagcgcttagagcaggcgttagaagcaattggtctacaaccatttatgccgagt
tgtcaacactcttacgatttagcgaaaggattatacgaatga

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