Dolosigranulum pigrum: FNV33_02525
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Entry
FNV33_02525 CDS
T06088
Name
(GenBank) MBL fold metallo-hydrolase
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
dpm
Dolosigranulum pigrum
Pathway
dpm03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dpm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
FNV33_02525
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dpm03019
]
FNV33_02525
Messenger RNA biogenesis [BR:
dpm03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
FNV33_02525
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Paralog
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GFIT
Motif
Pfam:
Lactamase_B_2
Lactamase_B
Anti-Pycsar_Apyc1
Motif
Other DBs
NCBI-ProteinID:
QDO90976
UniProt:
A0A516GHL0
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Position
500417..501718
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AA seq
433 aa
AA seq
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MSWMTIHSGLERIGGNIVEIATERVRVLTDFGVGIGDSDVSDEHQMSDLEQHLLDGSLPR
IEGVFETDQFQRVTLADRQTDQRPLVVILSHLHIDHMGGLIYLPSDATVYMSESTWRLYQ
QLIQLGLEQLPACQMVPVNEDEWIDVEDISFCLKKSDHDVPGVVSIWLETPDAKLIHSGD
FRLHGTSPEDVLDWARAAHEWQPDILLIEGTTYSKGTDEGKVDSQEESNKTRLYLDSEAA
LVAEFKQLLKQQDQLIAINLYERNIERIVALHRAAQQLDKTFVMETAIAQLVRAFYPDEK
IVEWSPAVRDEILTQPSKFILQNSYAHIDRLAEIGAGLYLHSNGTPLGDYDPEYAQMLSQ
VEAAGFEFQRFAVSGHATPEDILTIAKTVDATWTIPWHTFNPERLEQALEAIGLQPFMPS
CQHSYDLAKGLYE
NT seq
1302 nt
NT seq
+upstream
nt +downstream
nt
atgagttggatgacgattcatagtgggttagagcgaataggtggtaatattgttgaaata
gcaacagagcgtgtgcgcgtattgaccgattttggggtgggcattggcgattcagatgta
tcagatgagcaccaaatgagtgacttggaacaacatcttttggatgggtcactgcctcga
atagagggagtatttgaaacagatcaatttcaacgtgttactttagcggatcgtcagacg
gatcaacggccgctggttgttattttgtcacatttacatattgatcatatgggtgggtta
atttatttgccgagtgatgcgacggtgtacatgagtgaatcgacttggcgcttatatcag
cagcttattcaattaggactggaacaactccctgcttgtcagatggttccagtgaatgaa
gatgagtggattgacgttgaagatatttctttttgtctgaagaagagtgatcatgatgta
ccgggagttgtatcgatttggttagagacaccggatgctaagctgattcattcaggtgat
tttcgcctgcatggtacgtcgccggaggatgtgctggattgggcacgagcagctcatgag
tggcaaccggatattttactaatcgaagggacaacttattctaaaggtaccgatgaaggc
aaggttgacagccaagaagaatcgaataagacacggctttatttggattccgaagcagcc
ttagttgcggagtttaagcaactcttaaaacaacaagatcaactgatagcaatcaactta
tatgaacgaaatattgagcgaattgtcgcacttcatcgggcggcgcagcaattggataag
accttcgtgatggaaacagccattgcccagcttgttcgtgcgttttacccggatgagaag
attgtggaatggagtcccgcagtgagagatgagatattaactcagccatctaagtttatt
ttgcaaaatagctatgctcatatagatcgcttagcggaaataggtgcgggattatatttg
catagtaatgggacacctctgggagattatgaccctgaatacgcgcagatgctgagccaa
gtggaggcagcagggtttgaatttcaacgctttgcggtcagtggtcatgcgacaccggaa
gatattttaaccattgctaaaaccgttgatgcgacgtggacaattccgtggcatacgttc
aatcccgagcgcttagagcaggcgttagaagcaattggtctacaaccatttatgccgagt
tgtcaacactcttacgatttagcgaaaggattatacgaatga
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