Dolosigranulum pigrum: FNV33_03260
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Entry
FNV33_03260 CDS
T06088
Name
(GenBank) ATP-dependent RecD-like DNA helicase
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
dpm
Dolosigranulum pigrum
Pathway
dpm03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
dpm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
FNV33_03260
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dpm03400
]
FNV33_03260
Enzymes [BR:
dpm01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
FNV33_03260
DNA repair and recombination proteins [BR:
dpm03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
FNV33_03260
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_30
AAA_19
HHH_RecD2
OB_YrrC
SH3_13
UvrD_C_2
AAA_11
Viral_helicase1
UvrD-helicase
AAA_22
AAA_29
T2SSE
DEAD
HTH_IclR
PepSY_2
nSTAND3
SLFN-g3_helicase
AAA_28
AAA_25
Motif
Other DBs
NCBI-ProteinID:
QDO91115
UniProt:
A0A516GI04
LinkDB
All DBs
Position
669737..672145
Genome browser
AA seq
802 aa
AA seq
DB search
MELYVKGDVKAIFFSNPSNFYKVMLVGIEETNLDYDDDEIVVVGNVGRIQEGQSYEFYGT
LVDHPKYGIQLKVDRYKVQQPSSKEAIVQYLSSSRFKGIGQVTAERIVDTLGLECLDRIL
ADKEVLKQVPRLNQAKRDTIAEVITAERGLQQVILKLNEYGIANQLAYKIYAMYRDETLE
QLQTNPYQLAVDIEGIGFNKADHIASELEISEEAPSRIQAAIYFVLYNQCLSGGHTYLEA
EQLLTETLDTLESSRPYIIEPHLVEENLAALVESQAIIADEARFYVPSLFAAEWGIVQSI
EHLLSRQPVQNNFSEQVISQHIEKVQASLGIQYGESQRQAIHTALNESVFILTGGPGTGK
TTVLDGIVTIFSQLHDLSLDPNDYTDDHFPILMAAPTGRAAKQMAEATGLPASTIHRLLG
LGVDREERESSYEAAELKGQLLIIDEMSMVDTWLANQLFKSIPAGMQVILVGDKDQLPSV
GPGQVLRDLIDSGQVPQVELIDIYRQGDESSIIPLAHSIKQGRLPVDFTDPKNDRSFLAC
GPHNARQLIEKVVKRALAKGYSVEDIQVLAPMYRGDAGIDKLNQSLQAIFNPKTPEQKEV
SFIDKVYRVGDKVLHLVNEAELGIFNGDIGYIVGIIPKQESELNTDELVIDFDGNEVSYP
RSEWTKITLAYCCSIHKAQGSEYKMVILPLVGAFHRMLRKDLLYTAVTRASQFLILCGQR
KAYEQCVTTDNLQRQTTLKPFLLTDTEQVATIQSTIEQSEDQPHTEHSPEDTIEQWRLTP
QLIQSGRIDPMIGMEGLTPSNA
NT seq
2409 nt
NT seq
+upstream
nt +downstream
nt
gtggagttatatgttaaaggagacgtaaaagcgatctttttttcgaatccctcgaatttt
tataaagtgatgttagtagggattgaggagacgaatcttgattacgatgatgatgagatc
gttgttgtcgggaatgtcggccgaattcaagagggacaatcatatgaattttatggcacg
cttgtcgatcatcctaaatacgggattcagttgaaagttgatcgttataaggtacaacaa
ccttcttcgaaagaagctattgtccagtatttatcaagctcacggtttaaaggcattggc
caagtgacagctgaacggattgtagacacattaggattagagtgtttagatcgtatttta
gctgacaaagaggtgttaaaacaagtgcctcggctaaatcaggctaagcgtgatacgatt
gctgaagtgatcactgctgaacgtggcttgcaacaagtcatcttgaagttgaatgaatat
ggcattgctaatcaattggcctataagatttatgcgatgtatcgtgatgagacattggag
cagcttcagacaaatccatatcagttagcagttgatattgagggaatcggattcaataag
gcagatcatattgccagtgaattagagatttcagaagaagcgcctagtcggattcaagcg
gcgatttattttgtcttatataatcaatgcttaagtggtggtcatacgtatttagaggct
gagcagttattgacagagacattagatacactggagagcagtcgtccgtacattattgaa
ccacatctagttgaagagaacttagcagctctcgtggaatcacaagcgattattgctgat
gaagcgcgcttctacgttccttctttattcgcagcagaatggggaattgttcagtctatt
gaacacttattgtcgcgtcaacctgtacagaataatttcagcgagcaggtcattagtcaa
catatcgagaaggttcaagcctcgctagggattcaatatggtgagtcccaacgacaagcg
attcatacagcattgaatgagtcagtctttattctaacaggaggtccaggaacagggaaa
acaactgttctagacggaattgtgacgattttttctcagttgcatgatctttctctggat
cctaatgattatacagatgatcattttcctattctgatggcagctcctactggtcgagcg
gcgaaacagatggctgaagctacgggactgccggcctctactattcatcggttgttaggt
ttaggggttgatcgtgaagagcgagagtcctcttatgaagcagctgaacttaaggggcaa
ttacttattattgatgaaatgtcgatggttgatacatggttagctaatcagttatttaag
tctattccagctggtatgcaagtgattttagtaggagataaggatcaattgccatctgtc
ggtccgggacaagtcttacgtgatttaattgatagtgggcaagttccacaagtagagcta
atcgatatttatcgtcaaggcgatgaatcttccattattccactagctcacagcattaag
caaggaagattgcctgttgacttcactgatcctaaaaatgatcggagttttttagcatgt
ggaccacataatgcacgtcaattgatcgaaaaagtggttaaacgagcccttgcaaaaggt
tatagcgttgaagatatacaagtgctggcacctatgtatcgaggagatgcggggattgat
aagttgaatcagtccttgcaagcaatctttaatccaaaaactcctgaacaaaaagaagtc
tcctttatcgataaagtctatcgggtcggagataaagtactgcatttagtgaatgaagca
gagttgggtatttttaacggggatattggctatattgtaggaattattcctaagcaggaa
tcggaattaaatacggatgaacttgtaattgactttgatgggaatgaagtgagctatcca
agaagtgaatggactaaaattacattggcttactgctgttcgattcataaagcacaaggt
agtgaatataagatggtcatcttgcctctggtaggagcttttcatcggatgttacgcaag
gatttactctatacagcagttactcgagcgagtcagtttttaattctgtgtgggcaacgc
aaggcatatgaacaatgtgtgacaaccgataatttgcagcgtcaaacaacgctaaaaccg
ttcttgttaactgatacagaacaggtagcgactattcaatctaccatcgagcaatcagag
gaccagccacatacagagcattctcctgaagatacaatcgaacaatggcgtctcacccca
caactcattcagtctggtcgtatagacccaatgattgggatggaaggattgacgccgagt
aatgcttaa
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