Dolosigranulum pigrum: FNV33_03280
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Entry
FNV33_03280 CDS
T06088
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit UvrB
KO
K03702
excinuclease ABC subunit B
Organism
dpm
Dolosigranulum pigrum
Pathway
dpm03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
dpm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
FNV33_03280 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dpm03400
]
FNV33_03280 (uvrB)
DNA repair and recombination proteins [BR:
dpm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
FNV33_03280 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
FNV33_03280 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
AAA_16
AAA_25
AAA_19
AAA_22
Kinesin
AAA_7
UB2H
AAA_5
CCDC138_cc
HEM4
PMT2_N
DUF8810
Motif
Other DBs
NCBI-ProteinID:
QDO91119
UniProt:
A0A1S8KLT8
LinkDB
All DBs
Position
674667..676649
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AA seq
660 aa
AA seq
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MDTESVFDLKSKYEPAGDQPEAINQLVEGIKAGDKEHVLLGATGTGKTFTMSNVIQRVSK
PTLVIAHNKTLAGQLYTELKEFFPNNAVEYFVSYYDYYQPEAYVPSTDTFIEKDASVNDE
IDKLRHAATSSLLERRDTIVVASVSCIYGLVNPIDYKNHVLSLREGTEIGRDELLETLVD
MQYQRNDIDFKRGTFRVRGDVVEIFLVSRGSEAIRVEFFGDEIDRIREVDVVTGEVQHAL
KHVAVFPATHFVSSDEQTQSAINSINQELKEQLSELRDENKLLEAQRLEQRTEYDLEMLH
EMGYCSGIENYSRHLDGRQPGEAPYTLLDFFPDDSLFIIDESHMTMPQIRGMYNGDRARK
ERLIEHGFRLPSALDNRPLTLEEFEARVPQITYVSATPAQYEIERSSQVVEQIIRPTGLL
DPIIEVRPIKGQIDDLIDEIHKRIDKNERVFITTLTKKMSEDLTDYLKEVGIKVRYLHSD
IKTLERTEIIRDLRRGEFDVLIGINLLREGLDVPEVSLVAILDADKEGFLRSTRALIQTV
GRAARNENGRVIMYADNMTDSMQTTIDETERRREIQQAFNEEHNITPKTIKKAVPDLISI
AKVDNEDGEGLTEEKIKNLSQAERREMIETMEFEMKQAAKNLEFEKAAQLRDVVMEIKAL
NT seq
1983 nt
NT seq
+upstream
nt +downstream
nt
atggatacggaatcagtctttgatctgaaatcaaaatatgagccagctggagatcaacca
gaagcaattaatcaacttgttgaaggaattaaagctggggataaggaacatgtcttgttg
ggggcgactgggacagggaaaacttttacaatgagtaatgtgattcaacgagtcagtaaa
ccgacactcgttattgcccataataaaacactggcaggtcagttatatacagaattgaag
gagttttttccgaataatgcggtagagtattttgttagttattacgattattatcaaccg
gaagcgtatgttccatcaactgatacattcatcgaaaaagatgcaagtgttaatgatgag
attgataagttacgccatgctgcgacaagttcactgttggaacgacgagatacgattgta
gtggcatcggtctcgtgtatctatgggttagttaatccgattgattataagaatcatgtg
ctgtcactgcgagaagggacggagattggacgtgatgagctactggagaccttggttgat
atgcagtatcagcgtaatgatattgacttcaaacggggaaccttccgtgtgcgcggtgat
gtagtggagattttcctagtttcgcgtgggtctgaagcgattcgagtagaattttttgga
gatgaaattgatcgtattcgtgaagtggatgtggtgacaggtgaagtccaacatgcgctt
aagcacgtggccgttttcccagcgactcacttcgtctccagtgatgaacagactcagtca
gctatcaattctattaatcaggagctgaaagagcaattatctgagctacgtgacgagaat
aaattgctggaagctcaacgcttagagcaacggacagaatatgacctagagatgctccat
gaaatgggctattgctcagggattgagaactattcgcgacatttggatgggcgtcagccg
ggcgaagcaccatacacattactagattttttcccggatgattcgctctttattattgat
gagtcacatatgaccatgccgcaaattcgcgggatgtataatggggaccgtgcgcgaaaa
gaacggctgatcgaacatggttttcgcttgccgagtgcgctagataaccgcccgcttaca
ttggaagagttcgaagcacgtgtaccgcaaatcacatacgtctcagcaacaccggctcag
tatgaaattgaacgctccagtcaggtggttgaacaaattatccgaccaactggcttgctg
gatcccattattgaagtgcgaccgattaaaggccaaattgatgacttaattgatgaaatt
cataagcggattgacaaaaatgaacgggtctttattacaacattaacgaaaaaaatgtcg
gaggatctcacggattatttaaaagaagtcggtattaaagtgcgctatctacattctgat
attaagacgttggagagaacggaaattattcgtgacttgcgccggggcgagttcgacgtg
ttgattggaattaacctactcagagaagggttagatgtaccagaagtttcgttagtagcc
atcttagatgcagataaggaaggcttcttgcgtagtacgcgtgccttaattcagacggtg
ggtcgagctgcgcggaatgagaatggtcgtgttattatgtatgccgataatatgacagac
tcgatgcagaccacaattgatgagacggaacgtcgccgtgaaatccaacaagcctttaat
gaagaacacaatattacaccaaaaacaatcaagaaagccgtccctgacttaatcagtatt
gctaaagttgataatgaagacggtgaaggactgaccgaagagaaaatcaaaaacttatcg
caagcagaacgccgtgagatgatcgaaacgatggaatttgaaatgaaacaagcggctaaa
aacttagaatttgaaaaagccgcacaattacgtgatgttgtgatggaaatcaaagcgtta
taa
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