Dolosigranulum pigrum: FNV33_04630
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Entry
FNV33_04630 CDS
T06088
Name
(GenBank) PolC-type DNA polymerase III
KO
K03763
DNA polymerase III subunit alpha, Gram-positive type [EC:
2.7.7.7
]
Organism
dpm
Dolosigranulum pigrum
Pathway
dpm03030
DNA replication
dpm03430
Mismatch repair
dpm03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
dpm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
FNV33_04630
03430 Mismatch repair
FNV33_04630
03440 Homologous recombination
FNV33_04630
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dpm03032
]
FNV33_04630
03400 DNA repair and recombination proteins [BR:
dpm03400
]
FNV33_04630
Enzymes [BR:
dpm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
FNV33_04630
DNA replication proteins [BR:
dpm03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
FNV33_04630
DNA repair and recombination proteins [BR:
dpm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
FNV33_04630
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
RNase_T
PHP
DNA_pol3_finger
DNA_pol3_a_NII
DNA_pol3_a_NI
tRNA_anti-codon
HHH_6
Rv2179c-like
RNase_H_2
DEDDh_C
HHH_3
YhfH
DraK_HK_N
BioG
T2SSK
Zn_ribbon_TiaS
Na_Ca_ex_C
Motif
Other DBs
NCBI-ProteinID:
QDO91376
UniProt:
A0A516GIR0
LinkDB
All DBs
Position
989678..994009
Genome browser
AA seq
1443 aa
AA seq
DB search
MALSSHDLFQVLLKQLNLADQNNETTLKRGEIQSLTVLKSKQQWNLQLRFPSLLSVDQYM
VLKSQLDRTFVDIATIHLTINTEDKTYSEADMIAYWRPACQLSEIDSPLCNQLFEEATPV
IKQGKPIFYIEHELTLDKFKQDFFTVINEAYHQLGFPDNFRIEPVVDEQKSQARVNEFKE
EKEKQDEALAQRLTEQFHEVQARQQQQQAHVDTPSGPIQIGRDIPTNDPIREMETVVSEE
GQVTFEGYIFDVNIRDLRSGRKLLLMSMTDYTSSFRLKKFLNPNEEADAELIKEGMWMRA
RGRVQEDTFDKDIVMMVQSLQEIKKEPRKDTAPDERKRIELHAHSTMSQMDSVVSPTELV
EKAAEFGHAAVALSDHAVLQGYPDAHFAAQKHGIKMIYGLEAYLVDDGVPVAYHPAELNL
QEATYVVFDVETTGLSAIYDKIIELAAVKMVDGQIIEEFQEFIDPGHALSETTINLTGIT
DDMVRGSKSEVEVLEAFKAFTKDTILVAHNASFDMGFLNAAYNHHQLGESTLPVIDTLEL
SRTLHPNIKTHRLNTLAKRYDVALEQHHRAIYDSQTTARLLWIFLKEARDKFQMETHRSL
NDRVGEGDAYKQARPTHATILVKNATGLKNLFKIVSESLTRYYYRVPRVPKSLLDKYREG
LLVGSGCGQGEVFEAMMQKGMDEARSVSKYYDYIELLPKEAYIDLIDRELIQDEANLEDI
LRNLIKLAHNENKYPVAVGNVHYLEPRDAIFRDILLETSKKGARANTRNPQVHFRTTNEM
LEAFSFLESELAEEIVIDNTHKIADSIDSISPVRTDLYTPKMEGAEAEIRQMSFDKAREL
YGDPLPELVQKRLEKELDSIIGNGFSVIYLISQKLVNKSVQDGYLVGSRGSVGSSFVATM
TGITEVNPLAPHYRCPNCQYSHFFTEGEVGSGFDLPEKNCPECGTKMDSDGHDIPFETFL
GFKGDKVPDIDLNFSGEYQAHAHNYTKELFGEDYVYRAGTITTIADKTAFGFVKGYEGDK
QLTYRKPEIDRLAKGLTGVRRSTGQHPGGIIVVPNDMDIYDFTPIQYPADDQEAEWKTTH
FDFHSIHDNLLKLDILGHDDPTMIRKLQDLSGIDPQTIPVSDEEVMKIFSGPEVLGVTAE
QIFSKTGTLGIPEFGTGFVRGMLEQTHPSTFSELLQISGLSHGTDVWLDNAEELIRKRNI
PLSEVIGCRDDIMVYLQHQGLDDDLAFKIMEFVRKGRGLSEEWIAEMKEHGVPQWYIDSC
LKIKYMFPKAHAAAYVLMALRVAYFKVHHPLYYYAAYFSVRASDFDLVAMTEGKNSVKAA
IKEINDKGYDQTAKDRSLLTVLELANEMIERGFNFEMVNIDESHATDFLVKDEKTLLAPF
RAVPSLGSSVAQAIVQAREDSDFLSKEDLSKRGKVSKTVMEYFSVNHVVDHLPDENQLSL
FDL
NT seq
4332 nt
NT seq
+upstream
nt +downstream
nt
atggcgttaagtagtcacgacttatttcaagtgttattaaaacagcttaacttagctgat
cagaataatgagacaacattaaagcgaggggagattcaatcactcacggtattaaaaagt
aaacaacaatggaatctgcagttgcgatttccatcattgttatcggtggatcaatatatg
gtgctaaagagtcagttagaccgtacatttgttgatattgcaacgattcatttaactatt
aatacagaagataaaacttattctgaagcggatatgatagcttattggcgaccagcctgt
caattaagtgagattgattcaccgctgtgtaatcaattattcgaagaggcaactccggtc
ataaagcaaggaaagccaattttttatattgagcatgaattaacattggacaaatttaag
caagatttttttactgtcattaatgaggcatatcatcagttagggtttcctgataacttt
cgaattgagccggttgtggatgagcagaagagtcaggcgagagtgaatgagttcaaggaa
gagaaagaaaaacaggatgaagctcttgcacagcgtttaacggagcaattccatgaagtg
caagctcgtcagcaacaacaacaagctcatgtggatacgccaagtggtccgattcagata
ggacgcgatattccgactaatgaccctattcgtgagatggagacggtagtgagtgaagaa
ggtcaagtgacattcgaaggctatatatttgatgttaatattcgtgatctgcgttcaggg
cggaagttgctcttgatgagtatgacggattatacctcttcttttagattgaagaagttc
ttaaatccaaatgaagaagctgatgctgagctgattaaagaaggaatgtggatgcgcgcg
cgtggacgtgtacaagaagacaccttcgataaagatattgtaatgatggtgcagagtctg
caagaaataaaaaaagaaccgcgtaaagataccgcaccagatgaacgtaaacgaattgaa
ttgcacgctcattcaacgatgagtcagatggattccgttgtgagcccaacagaattggta
gaaaaagcagctgaatttggtcacgcggctgttgctttaagtgatcatgcggtgttgcaa
ggatatccggatgctcacttcgctgcccaaaagcatggtataaagatgatttacgggcta
gaagcttatttagttgatgatggtgttccagtagcctatcatcccgctgaattgaacttg
caagaagcaacttatgtcgtctttgatgtggagacgacaggtttgtcagctatttatgac
aaaattattgagttggctgctgtgaagatggtagacggccaaattattgaagagtttcaa
gaatttatcgatcctggtcatgcattatcggagacaacaattaatttaacagggattacc
gatgatatggtccggggttcaaaatcagaagtagaagtattagaagccttcaaagcattc
actaaagatacgattttggtggcacataatgctagctttgatatggggtttttaaatgcc
gcgtataatcatcatcaacttggcgagtccacattacctgtgattgatacgctagagctg
tcccggacgcttcaccccaatattaaaacacaccgcttaaatacattagcgaaacgttat
gatgtagccttagaacagcatcaccgagctatttatgattcgcaaacaacggctcgttta
ctctggatttttctcaaagaagcgagagataaatttcaaatggaaacacaccgttcactt
aatgatcgagttggagaaggtgatgcgtacaaacaagcgcgcccaactcatgctaccatt
ttagtgaaaaatgcgacgggcttgaaaaacttgtttaaaattgtgtcagaatcattaacc
cgttattattaccgggttcctcgtgtacccaagtcgttgctcgataaatatcgggagggc
ttgcttgtcgggagtggttgcgggcaaggtgaagtttttgaagcaatgatgcaaaaggga
atggatgaagcgcggagtgtctctaagtattatgactacattgagctgctgccgaaagaa
gcttatattgatttgattgatcgtgaattgattcaagacgaggccaatttggaagatatt
ttgcgaaacttaattaaactagcgcacaatgagaataaatatcctgtcgcagtgggcaat
gtgcattatttggagccgagagatgctatattccgtgacattttgttggaaacctcgaaa
aaaggagcgcgtgcgaacactcgaaatccgcaagtccattttagaacaacaaatgaaatg
ttagaggcattctcattcttagagtcggaattagctgaagagattgttattgacaatacg
cataaaattgcggattccattgactcaatttcgccggtacgaacagatctctatacgccg
aagatggagggagcagaagcagaaatccgtcagatgagttttgataaagcacgggaatta
tacggtgatccactaccagaactggttcaaaaacgcttggaaaaagagctagatagtatt
atagggaatggattctctgttatttatctaatttcacaaaaattagtgaataaaagtgtt
caagatggttatctggtcggttcacgagggtcggtcgggtcaagttttgtagcgaccatg
acgggcattacggaagtgaatccgctagcgccacattaccgatgtcctaattgccagtat
tctcacttttttacggaaggagaagtggggtccggctttgatttacctgagaagaattgt
ccggaatgtgggactaaaatggactcagatggccatgatattccatttgagacattttta
ggtttcaaaggagataaggttcccgatattgatttaaacttttcaggagaatatcaggca
catgcgcataattatacaaaggaattgttcggtgaagattatgtttatcgagcaggaacg
attacaaccattgccgataagactgcttttggttttgtgaaaggatatgaaggcgataag
caattgacctatcgcaagccagaaattgatcgcttggccaaaggattgacgggggtgcgc
cgatcaaccggtcagcacccgggtggtattattgttgtaccgaatgatatggatatttat
gatttcacacctattcagtatccagctgacgatcaagaagcagagtggaagacaacgcac
ttcgatttccattccattcatgataacttgcttaagctcgatattctgggtcatgatgat
ccaacgatgattcggaagttacaagatttatccgggattgatccacagacaattccggtc
agtgatgaagaagtgatgaaaattttcagcgggccagaagtacttggtgtaacagcggag
caaattttttctaagactgggacactcggtatacctgagttcggaactggtttcgtgcgg
gggatgttggaacagacgcatccatcaaccttctccgaattgcttcagatctcaggttta
tcacacgggaccgatgtatggctagataatgcagaagagttgattcggaagcgaaacatc
ccgctatccgaagtgattgggtgtcgtgatgatattatggtttatctacaacaccaaggc
ttagatgatgatttagcttttaagattatggaatttgtacgaaaaggtcgcgggcttagc
gaggaatggattgctgagatgaaagaacatggtgtgccgcaatggtacatcgattcctgc
ttgaaaattaaatatatgttcccgaaagctcatgccgccgcttatgtcttgatggcgctc
agggtggcttacttcaaggttcaccacccgctctattattacgcagcgtacttctctgtt
cgtgccagtgattttgacttagtggctatgacagaagggaagaattcagtaaaagccgct
attaaagaaatcaatgacaaagggtatgatcaaacagctaaagatcgctcgctattgaca
gttctagaactggctaatgaaatgatcgaacgtggctttaattttgagatggttaatatt
gatgaatcacacgccaccgattttctagtgaaggatgagaagacgctcctagcaccgttc
cgcgcagttccttcacttggctctagcgttgctcaagcgattgtacaagcacgagaagat
agtgatttcttatctaaagaagatttatccaagcgcggtaaagtatctaaaacggtgatg
gaatacttcagtgtgaatcatgttgtagaccacttgcctgacgagaaccaattgtcacta
ttcgatttgtaa
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