Dolosigranulum pigrum: FNV33_04930
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Entry
FNV33_04930 CDS
T06088
Name
(GenBank) hypothetical protein
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
dpm
Dolosigranulum pigrum
Brite
KEGG Orthology (KO) [BR:
dpm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dpm03400
]
FNV33_04930
Enzymes [BR:
dpm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
FNV33_04930
DNA repair and recombination proteins [BR:
dpm03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
FNV33_04930
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ADDB_N
PDDEXK_1
UvrD_C
Motif
Other DBs
NCBI-ProteinID:
QDO91433
UniProt:
A0A516GIU5
LinkDB
All DBs
Position
1060309..1063872
Genome browser
AA seq
1187 aa
AA seq
DB search
MALTFVLGRATSKKESYLYDLAKQQLQQDDVETVYYLIPDHLKFESEVAMLKYFNKDQSQ
SGMIDLQVYSFNRLAWHLLQQTGTFSQTRLSETGLSMLVKYIIRDIEEDLTIFRGESHFE
GFVQKVLQMLLEFRGGKIDPQSLRNINNQMDAQDLTQKLHDLSLIYEKFLDALDGKYLEK
EDVLRLLIAELKQRDLSKTVIIINQLETFSAQELELVLTLIAHCQHVYLALTLDRPYMLN
ERPGNFDLFYQSGMTYHTIFNLVKTPEWGMVPVENILLDDVDETIAPPLIALERFWVNSQ
NGQSLPQKSTIPSTDEAIQVVQATTKQAEVEYIAATIRDLTRLRDFRYRDILVTARDVDA
YKDVLQPIFQQEGIPYFMNERESMADHPFALFLNALLRLYKRHFRYEDMMSLLKTELFVP
ANYSDQDWRQMVDVMENVMLAYGYEGAYWLRDEPWQYARFDLDEISEPLDYDQQLEETAN
TVKNIIREALLPLFDAFDKAETNLEAVQALYNFLVKQGIKERLLTWRDRDIENGQLDHSR
KHEQVWNVFINLLDEFVEILGEQVWAVEECLAIFETGFEQGTYSSVPPTLDQVTVSPFTF
SRVSRHKIVFLLGVNEEALPVTAEQSSILTDEDREMIAEELGEQQYLMPSTTALLAGEPF
AAYRMFNAASEQLIMTYSQKRDSGNDHHLSPYVQRIVDYFPSVTVNRLPLIEESLRQEHA
SAVLPLIGGFQSTLGKLIQAIRITRDHQQPLNPFWSGLYRYMMRSLSPAQERLLTSLSYK
NVPKNISSTLAEQLYGTDMHLSISQLEQYFKDPYSHFLQYGLKLRERDTLELTPAESGSF
YHDILDQLISYVITEGLDITELPAAKIHELAAEIAKDLLTKSRYKILTTTHQLAFIARML
QETVSEQLLVMQEQFRRSAMRPSKTEVLFGRLGSQTGIPGLSFDLSPQHTLHVRGKIDRI
DQMVVEDQHHLQVVDYKSSRKSLDYSQLEAGLMLQMLTYFDVALTHSQALFGQVHQPMSA
FYAHVYSPWLNYTDLLNQSAEEAWLKAFKYDGLIVNYPDVFGQFEQTLTPKVGSLIYPIK
LNADGTPSKRSKIITPTELKLMFQHNRSLIQQAGKAIISGQIELRPYEDQYADSAPGGKF
HSISLFDALLPENNYRYLENLSKEEYIQKLQTIYEQLQGDDNDESIS
NT seq
3564 nt
NT seq
+upstream
nt +downstream
nt
atggcattaacctttgtcttaggccgagcgaccagtaaaaaagaatcgtatttatatgat
ttagctaaacaacagttacaacaggatgacgtagaaacggtctattatttaattccagat
catttgaagtttgagtcggaagtagctatgttaaaatattttaataaagatcagtctcaa
agtggcatgattgatttacaagtgtacagttttaatcgtctagcttggcatctcctgcaa
caaacgggaacattcagtcagacgcgcctatcagagactggattaagtatgttagtgaag
tatattattcgtgatattgaagaagacttaaccatttttcgtggagaaagtcattttgaa
ggatttgtccaaaaagttctgcaaatgttgctggaatttcgtggaggcaagattgatccc
caaagtctgcgtaatataaataatcagatggatgcgcaggatttaactcaaaagttacat
gatttatctctaatttatgagaaattcttagacgcactagatggtaaatatttggaaaaa
gaagatgtcttgcgactgttaattgcggagttaaagcaacgcgatttatcgaagacagtc
attatcattaatcaactagaaaccttctcagcacaagagctagagctcgttcttacccta
attgctcattgtcagcatgtttatcttgccttaaccttagatcgaccgtatatgttaaac
gagcgcccgggcaattttgacttattctatcagtcggggatgacgtatcacacaattttt
aatttagtgaagacgccagaatggggcatggtaccggtcgaaaatatcttgctcgatgat
gtggatgaaacaattgcaccaccgttgatcgccttagaacgcttttgggttaactcccaa
aacgggcagagtttaccgcaaaaatcaacaattccctcaacagatgaagcaattcaagtg
gtgcaagcaacgacaaagcaggcggaagttgagtatattgccgccactattcgtgattta
acacgtttgagagattttcgatatcgagatatcttagtgacggcacgtgatgtggatgcg
tataaagatgtgctacagccaatatttcagcaggaagggattccatattttatgaatgaa
cgggaatcaatggcggatcatccctttgccttgtttttaaacgcattattacgcttgtat
aagcgacattttcgttatgaagatatgatgagtttgttgaagacagagctgttcgtgcca
gctaattattcagaccaggattggcgtcagatggttgatgtcatggagaatgtgatgtta
gcgtatgggtatgaaggagcttattggttacgcgatgagccgtggcagtatgcgcgattt
gacttagatgagataagcgaaccccttgattatgatcaacagttggaagagactgccaat
acggtgaaaaatattattcgagaggcactcctgccgttgtttgatgcctttgataaggct
gagacaaatctggaagcagtgcaggcgctatataactttttagttaagcaagggattaaa
gagcggttactgacttggcgcgatcgcgatattgaaaacggccaacttgatcattcccgt
aaacatgaacaagtgtggaatgtgtttatcaatttgttggatgaatttgtcgagatatta
ggtgaacaagtatgggcagtggaggaatgtttagccatttttgagacggggtttgaacag
gggacttacagttcagtaccaccgacattagatcaagtaaccgtctctccctttaccttt
tcacgtgtctcacgccataaaatcgtattcttattgggggtgaacgaggaggctttgcct
gtgacggccgaacaatcctctattttaacggatgaggaccgagagatgattgctgaggag
ttaggagaacaacaatacttgatgccttcgactacggcactactggcaggggaaccattt
gcagcatatcggatgttcaatgcagccagtgaacaattaattatgacctatagccagaaa
agagatagcgggaatgatcatcatctaagtccgtatgtacagcggattgtggactatttc
ccgagtgtaacagtgaatagattaccgttaattgaagagtcacttcgtcaagaacacgct
tcagctgtattaccattaattggtggatttcagtccactttaggcaagttaattcaagcg
attcgtatcactcgtgatcatcagcaaccgcttaatccattctggtccggtctgtaccgc
tatatgatgcgctctttaagcccagcacaagaacgattattgacaagtttatcatacaaa
aatgtacctaaaaatattagttctactctagctgaacaactatatgggacagacatgcat
ctatctatttcacaattagagcaatacttcaaagatccgtatagtcacttcttgcaatat
ggattgaaattgcgtgagcgggatacattagagcttactccggctgaatcgggcagtttt
taccatgatatactagatcaattaattagctatgtgattacagaggggctggatataaca
gaattacctgcagcaaaaatccatgaattagcagctgaaattgctaaagacttattgacc
aaatcgcggtataaaatattgacaacaacgcatcagttggcttttatcgctcgaatgctg
caagagactgtaagtgaacaattattggtgatgcaagagcaatttagacgaagtgccatg
cgcccgtccaagacagaagtgctcttcggacgtttagggtcacagacgggtatacctggg
ttgagcttcgacttatctcctcaacataccctgcatgtgcgggggaaaattgatcgaatc
gatcaaatggtggtagaagatcaacatcacttgcaagtggtggattataaatcaagccgt
aaatcattggattacagccaattagaagcgggattaatgcttcagatgttaacatatttt
gatgtggcactcacgcactcgcaagcattattcggccaagttcatcaaccaatgagtgct
ttttatgcgcacgtctattctccgtggctgaactatacagacttgcttaatcaatcggct
gaagaggcatggttgaaggcgtttaaatatgacggacttattgtcaattatccggatgtg
tttggacaatttgaacagacattgacaccgaaagtcggctcactcatttatccaattaag
ctaaatgcggacggcacaccatctaagcggtccaaaataatcacaccaactgaattaaaa
ttaatgttccaacataaccgatcgctcattcaacaagcaggaaaagcgattatttccgga
caaattgagttgcgtccttatgaagatcaatatgctgacagtgcacctggtgggaagttt
catagtatttcgctatttgatgccttgctaccagagaataattatcgctatctagaaaat
ttatcaaaagaggaatatattcaaaaactacaaactatttatgagcagctacaaggagat
gacaatgatgagtcaattagctaa
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