Dolosigranulum pigrum: FNV33_04975
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Entry
FNV33_04975 CDS
T06088
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
dpm
Dolosigranulum pigrum
Brite
KEGG Orthology (KO) [BR:
dpm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dpm03032
]
FNV33_04975 (topA)
03400 DNA repair and recombination proteins [BR:
dpm03400
]
FNV33_04975 (topA)
Enzymes [BR:
dpm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
FNV33_04975 (topA)
DNA replication proteins [BR:
dpm03032
]
Prokaryotic type
DNA Topoisomerases
FNV33_04975 (topA)
DNA repair and recombination proteins [BR:
dpm03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
FNV33_04975 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
Zn_ribbon_RPB9
Toprim_4
HypA
Zn_ribbon_IS1595
Auto_anti-p27
Motif
Other DBs
NCBI-ProteinID:
QDO91442
UniProt:
A0A516GIU8
LinkDB
All DBs
Position
1074130..1076196
Genome browser
AA seq
688 aa
AA seq
DB search
MAFKYLVIVESPAKAKTIEKYLGRNYKVVASKGHVRDLPKSRMGVDFDNEYEPDYITIRG
KGPVLQDLRRYAKKAEKVYLAADPDREGEAIAWHLSHALKLDPEAENRVVFNEITKDAVK
NAFKQPKKLNADLIDSQQARRILDRIVGYKISPLLWKKVKRGLSAGRVQSIALKMICDRE
DEIRKFEPEEYWSIEAKFKKSRSKFEAKFFRLNGKKKDLPNNEAVQEVIAKIDEDQPFNI
DKVNRKERRRNPQPPFTTSSLQQEAANKLNFRTSKTMMVAQQLYEGIKLGGGAPVGLITY
MRTDSKRISDVAKAEATNYIHDEYGASYAASKKTNVKNSSGAQDAHEAIRPTSVMREPEA
IEKHLTKDQYKLYNLIWSRFVASQMKPAVYDTMRVDISQNGVTFRANGSKIKFQGYQKVY
RDSSTKDNMLPDMSEGESVKLDKLEPNQHFTQPPARYSEATLIKTLEENGVGRPSTYAPT
LATIQKRYYVTLTQKRFEPTELGEIVNEIIVEFFPDIVDINFTADLEVDLDSIEEGKNEW
IDVIDKFYQGFKEEVDKAEEEMEEVEIQDEPAGFDCERCGHEMVIKMGRYGKFYACSNFP
DCRNTKPILKKVGVTCPDCGEGEVVQRKSKKGRIFFGCERYPDCEFTSWDKPLARNCPKC
DSFLVEKRTRTKTQVKCSNCDYQEEEQR
NT seq
2067 nt
NT seq
+upstream
nt +downstream
nt
ttggcctttaaatatttggtgattgtagagtcaccggcaaaagcaaagacaattgaaaaa
tatcttggtcgcaattataaggtagttgcgagtaaaggacatgtacgtgatctacccaaa
agtcgtatgggagtagatttcgataacgaatatgaaccggattacattacgattcgcgga
aaaggaccggttctgcaagatttgcgtcgctatgcgaaaaaagcggaaaaagtttatctc
gcagccgacccggaccgtgaaggagaagcgattgcatggcacttaagtcatgccttgaag
ttagatccagaagcggaaaatcgtgtggtcttcaatgaaattaccaaagatgcggtcaaa
aatgcgttcaaacaaccgaaaaaactcaacgccgatttaattgattcacaacaagcacgg
cgtattttagatcggattgttgggtataagattagtccacttttatggaaaaaagtgaag
cgaggcttgagtgctggtcgtgtacaatcaattgcgctgaaaatgatatgtgatcgtgaa
gatgaaattcgcaagtttgaacctgaagaatactggtcaattgaagcgaagttcaaaaaa
tctcgttccaaatttgaagcaaaatttttccgattgaatggcaagaaaaaagacctacca
aataatgaggcagtacaggaagtcattgccaaaattgatgaagatcagccgttcaatatc
gataaagtgaatcgtaaagagcgccgacgtaacccacaaccaccatttacaactagtagc
ttgcaacaagaagcagctaataaactaaatttccgaacgagtaaaacaatgatggttgct
cagcaattatacgaagggattaaactgggtgggggtgcgccggtcggattaattacgtat
atgcgtactgattcgaagcgaatttctgacgtagcaaaagcagaagcgaccaactatatt
catgatgaatacggtgcatcttatgccgctagcaaaaaaacaaatgttaaaaacagtagt
ggtgctcaagatgcccacgaagcgattcgtcccaccagtgttatgcgtgaaccagaagct
atcgaaaagcatttaacaaaagatcaatacaaattatataatctcatttggtctcgcttt
gtagctagtcagatgaaaccagctgtatacgatacgatgcgtgttgatattagccaaaac
ggcgtgacattccgtgctaacggttctaaaataaaattccaaggatatcagaaggtctat
cgggactcctcaactaaagataatatgttaccagatatgtctgaaggggaatctgtaaaa
ttagacaagctagagcccaaccaacacttcactcaaccccctgctcgttatagtgaagct
actctcattaaaaccttggaagaaaacggtgttggtcgtccatcaacctatgcaccaacc
ctcgctactattcaaaagcgctattacgttactctaacgcagaaacgatttgagccgact
gaattgggcgaaatcgtcaatgaaattattgttgaatttttcccagatattgtcgatatt
aactttacagcagatttagaagttgatttagatagtattgaagaaggaaaaaatgaatgg
atcgatgtcatcgacaaattctatcaaggattcaaggaagaagtcgataaagccgaggaa
gaaatggaagaagtcgagattcaggatgaaccagctggctttgattgtgaaagatgtggg
cacgaaatggttattaaaatgggccgttacgggaaattttatgcttgctcgaattttcca
gattgtcgaaataccaagccgattttgaagaaggtaggcgttacgtgtcctgactgtggt
gaaggagaagtggttcaacgcaaatctaaaaaaggacgtattttctttggatgcgagcga
tatcctgactgtgaatttacctcttgggataaaccacttgcccgcaactgtccaaaatgt
gatagcttcttagtcgaaaaacgaacacgtacgaaaacccaagttaagtgttcaaattgt
gattaccaagaagaagaacaacgctaa
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