Dolosigranulum pigrum: FNV33_05730
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Entry
FNV33_05730 CDS
T06088
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
dpm
Dolosigranulum pigrum
Pathway
dpm00260
Glycine, serine and threonine metabolism
dpm00460
Cyanoamino acid metabolism
dpm00630
Glyoxylate and dicarboxylate metabolism
dpm00670
One carbon pool by folate
dpm00680
Methane metabolism
dpm01100
Metabolic pathways
dpm01110
Biosynthesis of secondary metabolites
dpm01120
Microbial metabolism in diverse environments
dpm01200
Carbon metabolism
dpm01230
Biosynthesis of amino acids
dpm01240
Biosynthesis of cofactors
dpm04981
Folate transport and metabolism
Module
dpm_M00140
C1-unit interconversion, prokaryotes
Brite
KEGG Orthology (KO) [BR:
dpm00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
FNV33_05730
09102 Energy metabolism
00680 Methane metabolism
FNV33_05730
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
FNV33_05730
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
FNV33_05730
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
FNV33_05730
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
FNV33_05730
Enzymes [BR:
dpm01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
FNV33_05730
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
DegT_DnrJ_EryC1
DUF5655
Motif
Other DBs
NCBI-ProteinID:
QDO91577
UniProt:
A0A516GJ83
LinkDB
All DBs
Position
complement(1248785..1250014)
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AA seq
409 aa
AA seq
DB search
MVKDTELFKAIDLEKQRQEENIELIASENFVSDEVMQAQGSVLTNKYAEGYPGKRYYGGC
QYVDIVEQLAIDRVKELFGAEYANVQPHSGSQANYAVFQALMEPGDTYLGMDLSHGGHLT
HGSPVNFSGIIYNVVPYGVDKETERVDYDEVLRLAKAHQPKMIIAGYSAYPGELDFAKFR
EIADEVGAYLMVDMAHFAGLVATGDYPSPIPYADVVTSTTHKTLRGPRGGLILSRDTKLA
KKLNSAIFPGSQGGPLEHVIAAKAVAFYEALQPEFKDYQQQVKKNIKAMVEVFNEAEEPR
VIMGATENHLTLIDVTGFDLTGKEAEHLLDEVKITVNKNTIPFETKSPFVTSGIRIGTPA
ITSRGFKEDDARKVAELIVRTLRAKEDEAEQEAIRQEVKTLTDKNPLYK
NT seq
1230 nt
NT seq
+upstream
nt +downstream
nt
atggtgaaagatactgaactatttaaggcaattgatctagaaaagcaacgtcaagaagag
aatattgaactgattgcttcggagaacttcgtatccgatgaagtgatgcaggcacaagga
agtgtcttaacgaataaatatgcggaagggtatccgggtaagcgctattacggtggatgc
cagtatgttgatattgtcgaacaacttgcgattgaccgagtgaaggaattatttggcgcg
gaatatgcgaacgtccaacctcactctggttctcaagcgaactatgctgtcttccaagct
ttaatggaaccgggtgacacttacttgggcatggacttgtctcacggcggtcacttaaca
catggatcacccgtaaacttcagtggtattatctataacgtggtgccttatggtgtcgat
aaggaaaccgaacgagttgactatgatgaagtcttaagattagccaaagcccatcaaccg
aagatgattatcgctggctacagtgcctatccaggagaactggactttgcgaaattccgc
gagattgccgatgaagtgggagcgtacttgatggtcgatatggcgcacttcgctggattg
gtagcgactggggactatccaagccctattccttatgctgatgttgttacctctaccaca
cacaagaccttacgtggacctcgtggcggcttaattctatcccgcgacaccaagctggcg
aaaaaattaaactcagccatcttccctggctcacaagggggcccacttgagcacgttatt
gccgctaaagcagtggctttctatgaagccttacaaccagagttcaaagactatcaacaa
caagttaagaaaaatattaaagcaatggtggaagtcttcaatgaagcggaggaaccgcgc
gtcattatgggagccactgagaaccacttgaccctaatcgacgtgacaggcttcgactta
acagggaaagaagcagaacatctactcgatgaagtgaaaattacagttaacaaaaacacc
attccattcgagacgaaaagtccattcgtcaccagtggaatccgtatcggaacacctgct
atcacttcacgtggcttcaaggaagatgatgcgcgtaaagtagctgaattaatcgtccgt
acgctccgagcgaaagaagacgaagcagaacaagaagccattcgtcaagaagtgaaaaca
ctgaccgataagaatccactgtacaagtaa
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