Dolosigranulum pigrum: FNV33_06210
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Entry
FNV33_06210 CDS
T06088
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
dpm
Dolosigranulum pigrum
Pathway
dpm03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dpm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
FNV33_06210
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dpm03019
]
FNV33_06210
03400 DNA repair and recombination proteins [BR:
dpm03400
]
FNV33_06210
Enzymes [BR:
dpm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
FNV33_06210
Messenger RNA biogenesis [BR:
dpm03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
FNV33_06210
DNA repair and recombination proteins [BR:
dpm03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
FNV33_06210
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
RecQ_Zn_bind
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
QDO91663
UniProt:
A0A516GJH3
LinkDB
All DBs
Position
complement(1337675..1339129)
Genome browser
AA seq
484 aa
AA seq
DB search
MTDLVRVLNDSFGFSSFRSGQEEAIQSALAGHDTLVMLPTGSGKSLCYQLFPYIREGITL
IISPLLSLMQDQVEKLKQSGHQEVTALNSFMTKVEKQYILNHLKQYKWVYLSPEMLQQDY
VLKYLKQVKINLFVVDEAHCISHWGMDFRPDYLQLGDYCQELGRPPIMALTATATEEVRQ
EIKELLTFDPDSSREILTTIDRPEIKLMTEYTEGNKVERTLELANYLQKPGIIYFSSRKL
ADQMSQLINERLDVAAESYHSHRTSADKVKIQQQFIQNKLQIICATSAFGMGINKADVRF
VIHYHMPASPAMYMQEIGRASRDGQPSIAILLYEPGDAQLQSFLKEQNIPDENTIRYFYR
NSQSLEVADDPQVHLLEYFKQHGYSVAETIQHFKLRQQQVAHQIDYMKQYISAEICKREI
LLNYFGATSENSEECCRSCNEDLLGEFKQTTNIAVLHQHQVWPKKKILKRLFNLDEIEYG
NMLQ
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
gtgacagatttagtgcgtgtattgaatgattcatttggtttctcatcttttcgttctgga
caggaggaggctattcaatcagccttggcgggacatgataccttagtgatgctgccgaca
ggatcagggaaatcgctttgttatcaactgtttccttatattagagaggggattacttta
attatttctcccttattgtcattgatgcaagatcaagttgagaagttaaagcaaagtggc
catcaagaagttaccgctttaaatagttttatgacaaaagtggaaaagcaatatatttta
aatcacttaaaacaatataaatgggtgtatttatctccagagatgttgcagcaagattat
gtgctcaaatatttaaagcaagttaaaattaatttgtttgttgtagatgaggcgcattgt
atttcacattgggggatggattttcggccagattatttgcagttaggtgattactgtcaa
gagctagggcggccacctattatggcgctaacggctacagcaacagaagaagtacgacaa
gagataaaagagttgttgacatttgatcctgactcatcgcgtgaaattttaacaaccatt
gatcgaccggaaattaaattaatgacggaatatacagaagggaataaagtcgagcgaaca
ttagagttagcgaactacttacaaaaaccaggaatcatttatttttcaagtcgtaaatta
gccgatcagatgagtcagctgattaatgagcggttagatgtggcagcagagagttatcat
tcgcaccgaacttcagcagataaagttaaaattcagcaacagtttattcaaaataaacta
caaattatatgtgcgacaagtgcgtttggaatgggtattaataaggcagatgtgcgcttc
gttattcattatcatatgccggcaagtccagcaatgtatatgcaagagattggacgtgcc
agccgggatggtcaaccgagtattgccattttactttatgaaccaggagatgctcagttg
caatcttttttgaaagagcagaatattccagatgaaaatacaattcgttatttttaccga
aatagtcagtcgctcgaagtagctgacgatccacaagttcatttgttagagtacttcaag
caacatggttatagtgttgccgagaccattcagcattttaaattgcgccaacagcaagtg
gctcaccaaattgattatatgaaacaatatatatcggctgaaatctgtaaacgagagata
ctgcttaattattttggtgcgacaagcgaaaactcagaggagtgttgtcgttcgtgtaat
gaagacttattaggcgaatttaagcaaacaacgaatatcgctgtcttgcatcagcaccaa
gtttggccgaagaaaaaaatattaaagagattattcaatcttgatgaaattgagtatgga
aatatgttacaatag
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