Dolosigranulum pigrum: FNV33_06275
Help
Entry
FNV33_06275 CDS
T06088
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
dpm
Dolosigranulum pigrum
Pathway
dpm03030
DNA replication
dpm03430
Mismatch repair
dpm03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
dpm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
FNV33_06275 (dnaE)
03430 Mismatch repair
FNV33_06275 (dnaE)
03440 Homologous recombination
FNV33_06275 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dpm03032
]
FNV33_06275 (dnaE)
03400 DNA repair and recombination proteins [BR:
dpm03400
]
FNV33_06275 (dnaE)
Enzymes [BR:
dpm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
FNV33_06275 (dnaE)
DNA replication proteins [BR:
dpm03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
FNV33_06275 (dnaE)
DNA repair and recombination proteins [BR:
dpm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
FNV33_06275 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
HHH_3
Motif
Other DBs
NCBI-ProteinID:
QDO91674
UniProt:
A0A516GJJ1
LinkDB
All DBs
Position
complement(1350242..1353556)
Genome browser
AA seq
1104 aa
AA seq
DB search
MTVVNLQVKSSYTLLESPIKVKDLVQQAAEMNYSAIALTDHNVLYGAVEFYQAAKKYGIQ
PIIGLTLDAEGFTNASVTYPLILLAKDFRGYQALIKLSSYQRKAQEAVSLERIKELSSTL
IVIVPTLQSELHQLYLGHKEGAIRELVTDIAAQFPDSFLGISPEQEHTFVQLLEAAGGEL
VALGDVQYLKAEDAFATEVLKAIDRGQPVDRQADLTGEYALKTPEEFSAVFHKMGLQEAV
DRTALIADRIDIELPLGQQLLPKYQTPEQMDADSYLRQLAEEGLRRRIVDVTEDYRERLD
KELSVISTMGFSDYFLIVWDIMTYARREQIETGFGRGSAAASLVAYALEITNIDPIEYDL
LFERFLNEQRYTMPDIDLDFPDNKRDKILQYVRDTYGDEHAAQISTFSTLAAKSSVRDTL
RVFGADSEEMKQWSQAIPTSQQRHISLEIAYEESASLRELVARSNRNKQIFQIAKTIEGL
PRNVSTHAAGVVISDIPLEENVPLQLGSGELLTTQYTMEDTEAIGLLKMDFLALKNLTIL
ANCFHYSAYEGSSSALTKADIPLNDPKTLKLFARGDTNGIFQFESEGIKQVLKRMRPSSF
EDIVATNALYRPGPMKQIQHFIDRKQGKEAIQYPHEDLKSILEVTYGVMVYQEQVMQVAT
TLAGYSLSEADQLRRTMSKKIQSEMDQGRDSFIQGALQQGYSQTIANQVYDYIEHFANYG
FNRAHAVAYSMVAYQLAYMKVHYPKSFFAAILKSEFGHDKKQALYNLEMKDRGITAMGPD
INRSFGLFSVVNEGILFGLSTVKGITSEFSKHIIEKRQVVGQFKDLIHFIEQLDERWLKG
EYIRPLIEVGAFDNLPHNRQTLLNSLADIIQSVKISGQNMELFHVMKPRMQQASDFSLKE
KLDMEMDLTGFYFSGHPTKQYQSLRKVLPLSYIAKAEEGSPKYILASVTDIHIIQTKKGL
PMSFVTLADETGVMKMILFPDQHRQFIKTFKQDDILIITGKVTPDIKQKEDLNIIASDIK
QAAPLLEQASHKLFLRFNSLQEQAQAFKHIQSLLKKDLGMCPVIIFDASTGRKNRLKKEY
YYNLDEKTLTAMEDILGNGNVVLQ
NT seq
3315 nt
NT seq
+upstream
nt +downstream
nt
atgacggttgtgaatctacaggtaaaaagctcatatacattgttagagagtccgattaag
gtaaaagacttagtgcaacaagcagctgagatgaattatagtgccattgcactgacggat
cacaatgtcttatatggtgcagttgagttttaccaggcagccaaaaaatacggtatccaa
ccgataattggtctaacattggatgcagaaggtttcactaatgcgagtgtaacttatccg
cttattttgttagcgaaagactttagagggtatcaagcactaataaaattgtccagttac
caacgtaaagcgcaagaagctgtgtcacttgagcgtataaaggaactgtcgtcaacttta
attgtcattgttccaacactccaaagtgagttgcaccaattatatcttgggcacaaagaa
ggagctattagggaattagtcacggatatagccgctcaattcccagatagttttttagga
atcagtccggagcaggagcatacgtttgttcaattactagaagcagcaggtggcgagttg
gttgctttgggagatgtgcaatatcttaaggctgaggatgcgtttgcgaccgaagtgcta
aaggcaattgatcgtggtcagccggttgatcgtcaagctgatttgacaggtgagtacgcg
ctgaaaactccagaagaatttagcgcagtttttcataaaatggggttacaagaagcggta
gatcgtactgccttaattgctgatcgtattgatattgagcttcctctggggcaacaatta
ttaccgaagtatcagacaccggagcagatggatgcggatagttatttaagacaattggct
gaagaaggtttgcggcgtcggatagtagatgtaacagaagattatcgtgagcgtctggat
aaagaattgtcggttatttcgacgatgggtttttcggactatttcttaattgtatgggat
attatgacgtatgcaagacgtgagcagattgaaacaggttttgggcggggatcagcggcg
gcttcgctcgttgcttatgctcttgaaattaccaatatcgatccaattgagtatgattta
ttgttcgagcgcttcttgaatgagcagcggtatacaatgccggatattgatttggatttt
cctgataataaacgagataaaattttacaatatgtgcgcgatacctatggcgatgagcac
gcagcccaaatctcaacatttagtacgctagctgctaaaagttctgttcgtgatacgttg
cgcgtatttggagcagatagcgaggagatgaagcaatggtcacaagcgattcccacgtcc
caacaacgccatattagtctggagattgcttatgaggaatctgcttccttacgcgagtta
gtagcgcgtagcaaccgtaataaacaaatttttcaaatcgctaaaacaattgaaggctta
ccgcgaaatgtttccactcatgcggccggggtagtgatttctgatattcctctcgaagaa
aatgttcccttgcaattagggagtggggaattattgaccacccaatatacaatggaagat
actgaagcgattgggttgttaaagatggatttcttggcgttgaagaacttgacaattttg
gccaattgttttcattattccgcatatgagggatcaagtagtgctctgacaaaagctgac
attccacttaatgatccaaagacattaaagctttttgcgagaggcgatacgaatggtatt
ttccagtttgaatcggaagggatcaagcaagtacttaagcgtatgcgcccgtcctcattt
gaagatattgtggcgactaacgcgctctaccgccccggaccgatgaagcaaatacagcac
tttattgatcggaaacaggggaaagaagccatccaatatccacatgaagatttgaaatct
attcttgaagtgacgtatggcgtcatggtgtatcaagaacaggttatgcaagtagcgacc
accttggccgggtattcactttctgaagcggaccaattaagacgtacgatgtctaaaaaa
attcagtcagaaatggatcaaggacgtgactcattcattcaaggggcattacagcaaggt
tatagtcaaacaatagcgaatcaagtgtatgattacattgaacactttgctaattatgga
tttaatcgagcgcatgcggtggcctattcaatggtagcttatcaattagcttatatgaag
gtgcactatccgaagtcattttttgctgcaatattaaaatctgaatttggtcatgataaa
aaacaagcgctctataatttagagatgaaagatcgtgggattacagcgatgggaccagat
attaatcgaagttttggcttgttttcggttgttaatgaaggtattttatttggtttaagt
acggttaaggggattacaagtgaattctcgaagcacattatcgaaaagcgacaagtcgtt
ggacaatttaaggatctaattcattttattgagcagctagatgagcggtggttgaagggt
gaatacattcgtccattaatcgaagtgggcgcatttgacaacttaccacacaaccgtcag
accttactaaattcattagcggatattattcaatcagttaagattagtggacaaaatatg
gaattattccatgtgatgaaacctcgaatgcaacaagcgtctgacttttcgctcaaagaa
aagttggatatggagatggatttaacagggttttatttttccggacacccgacaaagcaa
tatcaatctttacgcaaagtattgccactgagttatattgccaaagcagaagaaggctcg
ccgaagtacatcttagctagtgtgaccgatattcatattatccaaacgaaaaaagggtta
ccgatgtcatttgtgacgttggcggatgaaacaggtgtaatgaaaatgattctatttcct
gaccagcatcgccaatttattaaaacatttaaacaagatgatatcctcattataacaggg
aaagttaccccagatattaaacaaaaagaagacttgaatataattgcttctgatataaaa
caagctgctccattgttggaacaagcatcacataaattatttttgcgattcaattcattg
caagaacaagctcaagcattcaaacacattcagtcattacttaaaaaagatttaggaatg
tgtccagttatcatatttgatgcgtctaccgggcgaaaaaaccggttaaaaaaagaatat
tattataatttagatgaaaaaacgcttacggcaatggaagacattttaggtaatggcaac
gttgtgttacaatag
DBGET
integrated database retrieval system
