Dolosigranulum pigrum: FNV33_07235
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Entry
FNV33_07235 CDS
T06088
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
dpm
Dolosigranulum pigrum
Pathway
dpm03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dpm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
FNV33_07235 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dpm03019
]
FNV33_07235 (pnp)
03016 Transfer RNA biogenesis [BR:
dpm03016
]
FNV33_07235 (pnp)
Enzymes [BR:
dpm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
FNV33_07235 (pnp)
Messenger RNA biogenesis [BR:
dpm03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
FNV33_07235 (pnp)
Transfer RNA biogenesis [BR:
dpm03016
]
Prokaryotic type
tRNA degradation factors
FNV33_07235 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
S1_2
Peptidase_M20
KH_2
Motif
Other DBs
NCBI-ProteinID:
QDO91833
UniProt:
A0A516GJY6
LinkDB
All DBs
Position
complement(1537635..1539749)
Genome browser
AA seq
704 aa
AA seq
DB search
MFNKQEFTKEFAGRQLTVEVGQVARQANAAATIRYDDTVILSAVVNGDEPSTLPFFPLMV
NYEEKMYSVGKIPGGFIKREGRPSEHATLTARLIDRPIRPMFPEGFKYETQIYNTVLSVN
KDATPEMTAMFGSSLTLGLSTLPFNGPIAGVQVGRVDGEFVINPTEAQLAASDIDLIVAG
TKDAINMVESGAQEVSEADMLEALLFGHEAVKELCAFQDEIIAEIGQEKMEVELILPDAD
LKAAIEADYSEQMIAAVQNPDKMTRAEQVETLTDEIVAAYEEKFADDDELDSIMKDVKQI
IKDMEKAEVRRLITEDKVRPDGRDLHEIRDLDSEVAYLPRAHGSGLFTRGQTQALSVLTL
GPLAEHQVIDGLSSEEEKRFIHHYNFPSYSVGETGRPKSPGRREIGHGALGARALEAVIP
DEEDFPYTIRLVAEVLESNGSSSQASICAGSLALMDGGVPIKAPVAGIAMGLVMDSEDQY
TVLTDIQGLEDHLGDMDFKVAGTAKGITALQMDIKIEGITRDILVEALESAKNARLEILN
NMMNTIGQPREQLSEYAPKVQMIQIKPDQIKIVIGKGGDQINQIIDETGVKIDIEEDGKV
SVYGEDQAMIDRAIEIIEELTEEVEVGKIYKGKVVRIENFGAFVEVIKGTDGLVHISELA
DGYVKNVTDVVKMGEEVDVLVTEIDNMGRVNLSRKQAIEKKNEQ
NT seq
2115 nt
NT seq
+upstream
nt +downstream
nt
atgtttaataaacaagaatttacgaaagagtttgctggacgtcagttaactgttgaggtt
ggacaagtagctcgacaagcgaatgcggcagcgacgattcgctatgacgatacggttatt
ttaagtgcagttgttaatggtgatgagccatcaacgttgcctttcttccctttaatggtg
aattatgaagagaaaatgtactcagtcgggaagattcctggaggcttcattaagagggaa
ggtcgtccatcagagcatgcgactttgaccgctcgattaattgaccgtccgattcgtccc
atgttccccgaaggattcaaatatgagacccaaatttataatactgtcttaagtgtcaat
aaggatgcaacaccagaaatgacagccatgttcggttcctcactaacattaggcttatca
acattaccattcaatggtccgattgctggtgttcaggttggtcgtgtggatggtgagttt
gtgatcaatccaactgaagcacaattagctgcttctgatattgatctaattgtcgcagga
acgaaagatgcgattaatatggtagaatctggagcgcaagaagtaagcgaagcagatatg
ttagaagctttgttattcgggcatgaagcagtaaaagagttgtgtgctttccaagatgaa
atcattgcagagattggtcaagagaagatggaagttgaactcatcttacctgatgcagac
ttaaaagcagcgattgaagcagactatagtgaacaaatgatcgcggctgtacaaaatcca
gacaagatgacccgagcagaacaagttgaaactttaactgatgaaattgttgcagcttac
gaagaaaaatttgctgatgatgatgaactagacagtattatgaaagatgttaagcaaatc
atcaaagacatggaaaaagctgaagttcgccgattgattaccgaggataaagtacgtcct
gatggtagagacttgcatgaaattcgtgaccttgattctgaggtggcttacttaccacgt
gcgcatggttcaggactcttcacacgtggccaaacgcaagcactgtccgtcttaacgttg
ggaccactagcagaacaccaagtgattgatggtctaagttcagaagaagaaaaacgattt
attcaccactataacttcccaagttattcagtcggtgaaacaggacgtccgaaatcacct
ggccgtcgtgaaattggacacggtgctttaggtgcgcgtgccttagaagctgttattcct
gacgaagaggacttcccatacacgattcgtcttgttgctgaagtacttgaatcgaacggc
tcctcttcacaagcaagtatttgtgccgggtcgcttgcgctaatggatggtggtgtgccg
attaaagcccctgttgctggaatcgctatgggactggtaatggatagtgaagatcaatat
acggtcttaaccgatattcaaggattagaagaccacttaggtgatatggacttcaaagtt
gccggaactgctaaaggtattaccgcactgcaaatggatattaaaattgaagggattacg
cgtgatatcttagttgaagcactcgagtcagctaaaaatgcccgccttgaaattttaaat
aatatgatgaatacaattggtcaaccaagagagcaacttagtgaatacgcgccaaaagtt
caaatgatccaaattaaaccagaccaaattaaaattgtcatcggtaaaggcggcgaccaa
attaatcaaattatcgatgaaactggcgtgaagattgatattgaagaagacggaaaagta
tctgtctacggtgaagatcaagcgatgattgatcgcgccattgaaattattgaagaacta
accgaagaagtcgaagtaggcaaaatctataaaggaaaagttgtccgcattgaaaacttt
ggtgctttcgttgaagtgattaaagggacagatggcttagtccatatttctgaattagct
gatggttacgtgaaaaatgtgacggatgtagtgaaaatgggcgaagaagttgacgtccta
gtgactgagattgataacatgggtcgtgtgaatttatcacggaagcaagcgattgagaag
aaaaacgagcaataa
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