Dolosigranulum pigrum: FNV33_08315
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Entry
FNV33_08315 CDS
T06088
Symbol
selB
Name
(GenBank) selenocysteine-specific translation elongation factor
KO
K03833
selenocysteine-specific elongation factor
Organism
dpm
Dolosigranulum pigrum
Brite
KEGG Orthology (KO) [BR:
dpm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
dpm03012
]
FNV33_08315 (selB)
Translation factors [BR:
dpm03012
]
Eukaryotic type
Elongation factors
FNV33_08315 (selB)
Prokaryotic type
FNV33_08315 (selB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
WHD_3rd_SelB
Beta-barrel_SelB
GTP_EFTU_D2
WHD_2nd_SelB
MMR_HSR1
SRPRB
Spectrin_SYNE1_2
FeoB_N
HemN_C
SurA_N_2
aSelB_III
Ssr3402
Motif
Other DBs
NCBI-ProteinID:
QDO92023
LinkDB
All DBs
Position
complement(1772621..1774519)
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AA seq
632 aa
AA seq
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MTVVEKRNIVIGTAGHVDHGKTTLIKALSGIDTDTTEEEHRRGLSINLGFAYMTLDDGTE
AGIVDVPGHEKFLKNMLAGAPGLDLALLVIDANEGIMPQTSEHANILRLLGIENFIIVLT
KVDGVDEILLEIVQEDIREQFNGTALAEAPIIATDALAEIGIDQLRAEITKRCSQMTREA
SKLPPRLNVDRSFSVKGFGTVVTGTLVDGMLHVGDDMTIYPSGLQTRIRNIQIHEEDVEV
AYPGNRTALNLTKVDVDEVPRGSVLTTAHLPASYMLDVNVQCLPDSPYALELWDRVHVHI
GTQEVRARIVPIGAETIYQGETGYLQLRLEEKVSAKVGDHFILRSFSPLHTIAGGTVLDE
DPQKHKRFNEEVIESLQVKESGDFGEIMIDFLRKETTGLTDERTISEELNIELPHVKELT
GELIDQGKLYAFGHQVMAAEDVQQFTDRVQQLLGDYHDTYPIRSGMPLEEFRTKFKELAP
KDLDALLKYITQEELVASENNRIRLTAFNPELEGEAREISDEIDATFREAGMNPPTPEAV
IQDDQTRQEVFNQMVGRQLFRLDKYEYIHMSVYEDARAQVIQHLQRHGEIVLATFRDMMD
TSRKYAMLLLEHLDDAGVTKRVGDVRILREKE
NT seq
1899 nt
NT seq
+upstream
nt +downstream
nt
atgacagtggtggagaagagaaatattgtaatcggaacggcgggtcatgttgaccacggg
aagacaaccttaattaaggcgctgagcggaatcgatacagatacaacggaagaagaacat
cgtcgggggctatccattaatttggggtttgcttatatgaccttagatgatgggacggaa
gctggaattgttgatgtgcccggacatgagaagttcttgaagaatatgttagcgggcgca
ccaggtttggatttggcgttattggtgatcgatgcgaatgaaggtattatgccacagacg
tctgagcatgcgaatattttgcgtctcttaggaattgagaatttcatcattgtcttaacg
aaggtcgatggtgtggatgagatcttactggaaattgtacaagaagatattcgggagcaa
ttcaacggaacggctttagcggaggctccaattatcgccaccgatgccttagcagagatt
gggattgaccagttgcgggccgagattacgaagcgctgtagccaaatgacacgtgaagca
tctaaattaccaccacgtctgaatgttgatcgtagcttttcggtaaaagggttcggaaca
gttgtcacaggaacgttagtggacgggatgcttcatgttggtgatgatatgacgatttat
ccgagtggtcttcagacacggattcgtaatatccaaattcacgaagaagatgtagaggta
gcgtatccgggcaatcgaaccgccttgaatttaacgaaggtggatgtcgatgaagtacct
cggggaagtgtgctaacaacggcgcatttgccagctagttatatgttagatgtgaatgtg
cagtgcttgccggattctccatatgctttggaactctgggatcgcgtgcatgttcatata
ggaacgcaagaagtccgcgcacggattgttccaatcggggcagagaccatttatcaaggc
gagaccgggtacttgcagttgcgcttggaagagaaggtgtcggcaaaagtaggggatcat
ttcatcctacgttcattctctccgctgcacacgattgcgggcgggactgtcctagacgag
gatccgcagaagcataagcggttcaacgaagaggtaattgagagcttacaagtgaaagag
tctggagactttggtgagattatgattgacttcttgcgaaaagaaacaactggcttaacg
gatgagcgaactattagtgaagaacttaatatcgaactgccgcatgtaaaagagttgacc
ggcgaattaattgaccaagggaagctctatgcattcgggcatcaagtcatggcggcggaa
gatgtccagcagttcactgatcgcgtccagcaacttttgggtgattatcatgacacttat
ccgattcgatccgggatgccactagaagaatttcggaccaaattcaaggagttagcacca
aaagatttggatgcattgttgaagtatataacgcaagaagagttggtagccagtgagaat
aatcgcattcgtctgacggcatttaatccagagctggaaggagaagcacgtgagatcagt
gatgaaatcgatgcgactttccgtgaagcggggatgaatccaccgacaccagaagcagtg
attcaagatgaccagacgagacaagaagtgttcaatcagatggttggtcgacaactgttc
cgtctagataagtatgaatacattcatatgtctgtctatgaggatgcccgtgcgcaagtg
attcaacacttgcagcgtcatggtgagatcgtattagccacgttccgtgacatgatggat
acgtctcggaaatatgcgatgttactgttggagcacttggatgatgcgggtgtgaccaag
cgagtgggcgatgtgcgcatactgagagagaaggagtga
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