Dialister pneumosintes: BCB69_04880
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Entry
BCB69_04880 CDS
T04459
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
dpn
Dialister pneumosintes
Pathway
dpn03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dpn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BCB69_04880
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dpn03019
]
BCB69_04880
03400 DNA repair and recombination proteins [BR:
dpn03400
]
BCB69_04880
Enzymes [BR:
dpn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BCB69_04880
Messenger RNA biogenesis [BR:
dpn03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
BCB69_04880
DNA repair and recombination proteins [BR:
dpn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
BCB69_04880
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HRDC
DEAD
Helicase_C
RQC
RecQ_Zn_bind
ResIII
AAA_30
Motif
Other DBs
NCBI-ProteinID:
AOH39342
UniProt:
A0A1B3WEF0
LinkDB
All DBs
Position
complement(975950..978058)
Genome browser
AA seq
702 aa
AA seq
DB search
MDVQSPESLLKKYFGYDNFRKGQREVVQALLEKKDILAIMPTGAGKSICFQIPSLLMPYG
VVVISPLISLMKDQVEALKEQGIEAAYVNSTISFDESIECLRDVYRGKIKILYMAPEKLE
PSYFTDCLSQVPLSMVVIDEAHCVSQWGHDFRPSYRKIREFIDSLTVKPIVSAFTATATP
LVEADIKKSLGLEQAMLLRIGLDRPNLSFRVFRGLPKEKQNQLLLKYVKMHSRESGIIYC
ATRKAVDSIYELLKQQGVSVGKYHAGLADEERYNSQDDFSYERKMVMVATNAFGMGIDKS
NVRYVIHYQMPKSLEAYYQEAGRAGRDGAKAECILFYNAKDVGIHKYLLSQSDLSEEQKQ
IEYRRLHKMIAYCGTTSCLRNTILTYFGEKPTQVCNHCSSCETMHSERDITDLATLIFRT
IRNVGERFGSSVIADILKGSRSQYILSHQLNKQLTYGKLSFEKTNSIRSILHTLIADGYL
QQVGEPYPIVQLTNKAEHVLLGKAKVKGLAPGVDAMIAKQTVTDFYKPLSHDRLYEKLLQ
LRSTIAQREHVPPFVIFSDATLEEMATEVPTSFQQLGKINGVGDFKLQKYGRPFLKVLKE
DFALKKLEKLNQKQENKKQEVQKEWIYKYLSSIRLSCSRQQGIEPFRVFSNRTLEEMAEY
IPKNKTEMMNIYGVGPVKWEKYGNIFLSAIQDVLHKIKIPRT
NT seq
2109 nt
NT seq
+upstream
nt +downstream
nt
atggatgtgcaatcaccggaatcattattaaaaaagtattttggatatgataatttccgc
aaaggacaacgagaagttgtacaagctcttttagagaagaaagatatattagctattatg
cctaccggagcgggaaaatctatttgttttcaaataccttctttactaatgccttatgga
gttgttgtcatttctcctttaatttcacttatgaaagatcaagtggaagcattaaaagaa
caagggattgaggctgcatatgtgaatagcaccatatcttttgatgagtctattgagtgc
ttacgagatgtgtatagaggtaaaattaaaatattatatatggctcctgaaaaattggaa
ccttcttactttactgattgcttaagtcaagttcctttatctatggttgttattgatgaa
gctcattgtgtatctcaatggggacatgattttcgtcccagctatagaaaaattagagag
tttatagattctcttactgttaaacctatagtgtcagcctttactgctacggcaacaccc
ttagtagaagctgatataaaaaaaagtttaggtcttgagcaggctatgcttttacgtatt
ggcttagatcgtccgaatttatcttttcgtgtttttcgtggattacctaaagagaagcag
aatcaattgcttttgaagtatgtgaaaatgcatagtagagagagcggtattatttattgc
gctacacgaaaagctgtagattctatatatgaattattaaaacaacaaggtgtatctgtc
gggaaatatcatgcagggcttgctgatgaagaacgatataattcacaagatgatttctct
tatgagagaaaaatggttatggttgctactaatgcttttggtatgggcatagataaaagt
aatgttcgttatgtaattcattatcaaatgcctaaaagtttagaagcctattatcaagaa
gcaggacgtgcagggcgagacggggctaaggcagaatgtattttattttataatgctaaa
gatgtaggcatacacaagtatttattatcacaatctgacttgtcggaagagcagaaacaa
atagagtatcgtcggttacataaaatgattgcttattgtggtacaacttcttgtttacgt
aatacaattttaacttattttggagagaaacctactcaagtatgtaatcattgttcttct
tgtgaaactatgcatagcgagcgagatattactgatttggcaacattaatatttcgtacc
atacgaaatgttggggaaaggtttggcagttctgtgattgctgatatattaaaaggaagt
cggtctcaatatattctttctcaccaactaaataaacaattgacttatggaaaactttct
tttgaaaaaacaaattccattcgaagtatattacatacgttaattgcagatggatatcta
cagcaagtcggtgagccttaccctatagtacaactgacaaataaagctgaacatgtattg
ttggggaaagcgaaagttaaggggttagcacctggagtggatgctatgattgctaagcaa
actgttaccgatttttataaaccattatcacatgatagattgtatgagaaattattacaa
ttgcgtagtactatagcacaacgagagcatgtacctccttttgttatattttcggatgcg
actttagaagaaatggcaacagaagtgcctactagttttcagcagttaggaaaaattaat
ggtgtaggagattttaaactacaaaaatatggacgtccctttttgaaggtacttaaagaa
gattttgctttaaagaaattagagaaactaaatcagaagcaagaaaataaaaagcaagaa
gttcaaaaagagtggatttataaatatttgtcttctattcggctttcttgttcaagacaa
caagggattgaaccatttagagtgttttcgaatagaacactggaagaaatggcagaatat
atacctaagaataaaaccgagatgatgaatatatatggagtgggaccggtcaaatgggaa
aagtatggaaatatatttttatcagctattcaagatgttttgcataagataaaaataccg
agaacatga
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