Drosophila pseudoobscura: 117184409
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Entry
117184409 CDS
T01032
Name
(RefSeq) ATP-dependent RNA helicase me31b
KO
K12614
ATP-dependent RNA helicase DDX6/DHH1 [EC:
5.6.2.7
]
Organism
dpo
Drosophila pseudoobscura
Pathway
dpo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dpo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
117184409
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dpo03019
]
117184409
03036 Chromosome and associated proteins [BR:
dpo03036
]
117184409
Enzymes [BR:
dpo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
117184409
Messenger RNA biogenesis [BR:
dpo03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
117184409
mRNA degradation factors
5'-3' decay
Decapping complex
117184409
Chromosome and associated proteins [BR:
dpo03036
]
Eukaryotic type
Gene silencing
piRNA pathway
117184409
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
AAA
Motif
Other DBs
NCBI-GeneID:
117184409
NCBI-ProteinID:
XP_033237489
UniProt:
A0A6I8W470
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All DBs
Position
X:29311754..29313298
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AA seq
459 aa
AA seq
DB search
MMTEKISSGHTNLSNKGIINDQKILANISDDMGWKSKLKLPPKDNRFKTTDVTDTRGNEF
EEFCLKRELLMGIFEKGWERPSPIQEAAIPIALSGKDVLARAKNGTGKTGAYCIPVLEQI
DPTKDYIQALVMVPTRELALQTSQICIELAKHLDIRVMVTTGGTILKDDILRIYQKVQLI
IATPGRILDLMDKKVADMSHCRILVLDEADKLLSLDFQGMLDHVILKLPKDPQILLFSAT
FPLTVKNFMEKHLREPYEINLMEELTLKGVTQYYAFVQERQKVHCLNTLFSKLQINQSII
FCNSTQRVELLAKKITELGYCCYYIHAKMAQAHRNRVFHDFRQGLCRNLVCSDLFTRGID
VQAVNVVINFDFPRMAETYLHRIGRSGRFGHLGIAINLITYEDRFDLHRIEKELGTEIKP
IPKVIDPALYVANVSGSSGEICNNSDLNTSANEEGNVSK
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atgatgacggaaaaaatatcttctggccacactaatttatcaaacaagggcataataaat
gaccagaaaatccttgccaacatcagtgacgatatgggctggaaatcgaagctaaaacta
cccccaaaggataaccgatttaaaacaacagatgtgaccgatacacgtggaaatgaattt
gaagaattttgccttaaaagagaattacttatgggtattttcgaaaaaggatgggagcgt
ccctctcccattcaagaggctgctatacctattgctctgagtggaaaagatgtactagct
cgagccaaaaatggaactggtaaaactggagcttattgtattccggttttagagcaaata
gacccaacgaaagactatatccaagcattagtgatggttcctacacgagaactggcctta
caaacttcacagatatgcattgaactagcaaagcatcttgatatacgagtaatggtcacc
actggaggtaccattctaaaagacgatattcttcgtatatatcaaaaagtacaattaatt
attgcgacccctggacgaatattggatttgatggataagaaagttgctgatatgtcgcat
tgcaggatattagttttggatgaagccgataaactactgtcgcttgattttcaaggcatg
ctggatcatgttatattaaaattgccaaaggatccacagatactgctattttctgcaaca
tttccactgactgtgaaaaattttatggagaagcatttacgcgagccatacgaaataaac
cttatggaggaactgacgttaaaaggtgtcactcagtactatgcatttgtacaagaacgt
cagaaagtacactgcttaaacacgttattttcaaagttgcaaattaaccaatctataata
ttttgcaattctacgcaacgtgtcgagttattagctaaaaaaattacagagcttggctat
tgttgctattatatacatgcaaaaatggcgcaagcacatagaaacagagtgtttcatgac
tttcgtcaaggtctctgtaggaatttagtttgctctgatttatttactcgaggaattgat
gtacaggccgttaatgttgtaattaattttgattttcctcgaatggctgagacatacttg
catcgtattgggcgttctggtcgattcggtcatttgggaattgctataaatctaataact
tacgaggatcgctttgatcttcatcggattgaaaaggaacttggtaccgaaataaaaccc
ataccgaaggtaatcgaccctgcattatatgtcgcaaatgttagcggatcgtctggagaa
atttgcaacaacagtgatcttaatacttctgcaaacgaggaaggcaatgttagcaaatag
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