Drosophila pseudoobscura: 26532891
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Entry
26532891 CDS
T01032
Name
(RefSeq) DEAD-box helicase Dbp80
KO
K18655
ATP-dependent RNA helicase DDX19/DBP5 [EC:
5.6.2.7
]
Organism
dpo
Drosophila pseudoobscura
Pathway
dpo03013
Nucleocytoplasmic transport
dpo03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
dpo00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
26532891
03015 mRNA surveillance pathway
26532891
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dpo03019
]
26532891
Enzymes [BR:
dpo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
26532891
Messenger RNA biogenesis [BR:
dpo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
26532891
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
AAA_30
Motif
Other DBs
NCBI-GeneID:
26532891
NCBI-ProteinID:
XP_033238369
UniProt:
A0A6I8W6U6
LinkDB
All DBs
Position
2:19056426..19064832
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AA seq
479 aa
AA seq
DB search
MTDWVKKAEDQEVTKLVDQLQIQSDENAFAIRNNSSVYDLPATKNDEESEPDVADPAETS
LLIKILGKGLVNTKLSLDVQQKNPNSPLHSVKTFEALNLKTELLKGIYAMGFNTPSKIQE
TALPTLLADPPQNMIAQSQSGTGKTAAFVLAMLSRVNVNLNHPQVLCLSPTYELAIQTGE
VAARMGQYCPDIKLRFAVRGEEVDRNKKITEHILIGTPGKMLDWGYKFRLFDMKKISVFV
LDEADVMIATQGHHDQCIRIHKMLNPHCQMLFFSATYDREVMDFAQLIVTEPTIIRLNRE
QESLDNIKQYYVKCKNEDGKYNAIQNIYGCISIGQAIIFCHTRRTAAWLASKMTMDGHSV
AVLSGDLTVDQRLSVLDRFRSGLEKVLITTNVLSRGIDIEQVTIVVNFDLPVDIRGNADC
ETYLHRIGRTGRFGKSGIAINLVSGEKCMAVCRAIEKHFKKDIQVLNTDSADDIEKIGN
NT seq
1440 nt
NT seq
+upstream
nt +downstream
nt
atgacggattgggttaaaaaagcagaagaccaggaagtaaccaagctggttgaccaacta
caaattcaatctgatgagaatgcgtttgctatcaggaacaacagttctgtgtatgatttg
ccggcaacgaaaaatgatgaagaatccgaacccgacgtcgctgaccctgctgaaaccagc
ctcctaattaaaatattgggaaaaggattggtaaacacaaaactatctcttgatgtacag
caaaaaaatccgaattcacccctacattctgtgaaaactttcgaagcattaaatctgaag
acggaacttttaaaaggaatttacgcaatgggctttaacacgccgtcgaaaatacaagag
actgctttgccaacgctccttgcagatccaccacaaaatatgatagctcaaagccagtct
ggaacaggaaaaacggctgcctttgtcttggcaatgcttagccgtgtgaacgttaattta
aatcacccacaggtcctgtgcttgtcccccacatatgaattggcaatccaaacaggggaa
gttgctgcacgtatgggacagtactgtcccgacatcaaactaagatttgcagttcgcggt
gaagaagttgatcgtaataaaaaaattactgagcacatcctaattggaacaccaggcaaa
atgttagactggggatacaagtttcgtctttttgacatgaaaaaaatttcagtttttgta
ttagacgaagcagatgttatgatagccactcaaggtcaccatgatcagtgtattcgaata
cataaaatgctcaatcctcattgccaaatgttgtttttctctgctacctatgatagggaa
gtaatggactttgctcaactaattgttactgagccaacaattataagattgaatcgagag
caggaatctctggataatattaaacagtattacgttaaatgtaaaaatgaagacggaaaa
tataatgcaatacaaaatatttatggatgcatcagcattggccaagccatcatattttgt
catacgcgtcgtactgctgcttggcttgcatcgaagatgactatggatggtcattctgtt
gctgttctttctggtgacttgactgttgatcaacgactttctgttttggatcgatttcgt
tcaggactagaaaaagttctcataaccacaaatgtcttatcaaggggtattgacattgaa
caagttacaattgtcgttaattttgacctgccggtagatattcgaggcaacgcagactgc
gagacatatttgcatcgcatcggacgtaccggacgatttggaaagtctggaatcgctata
aaccttgtaagcggagaaaaatgtatggcagtgtgtagggccattgaaaaacattttaaa
aaagacattcaagttttaaatactgatagcgctgatgacattgaaaagattggaaactaa
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