Drosophila pseudoobscura: 4800293 Help Entry 4800293           CDS       T01032                                  Name (RefSeq) protein similar isoform X2   KO K08268   hypoxia-inducible factor 1 alpha Organism dpo  Drosophila pseudoobscura Pathway dpo04137   Mitophagy - animal dpo04140   Autophagy - animal dpo04148   Efferocytosis Brite KEGG Orthology (KO) [BR:dpo00001]  09140 Cellular Processes   09141 Transport and catabolism    04140 Autophagy - animal     4800293    04137 Mitophagy - animal     4800293    04148 Efferocytosis     4800293  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03000 Transcription factors [BR:dpo03000]     4800293 Transcription factors [BR:dpo03000]  Eukaryotic type   Basic helix-loop-helix (bHLH)    Factors with PAS domain     4800293 SSDB OrthologParalogGFIT Motif Pfam:  bHLH_HIF1A PAS_3 PAS PAS_11 PAS_9 PAS_4 HLH DUF4107 HIF-1 Motif Other DBs NCBI-GeneID:  4800293 NCBI-ProteinID:  XP_001357647 UniProt:  A0A6I8ULY4 LinkDB All DBs Position 2 Genome browser AA seq 1570 aa AA seqDB search MVSLIATIDAAAEAQKQRNAADPAAASSSISATGSALAKASPGSGSNLTASGKPKEKRRN NEKRKEKSRDAARCRRSKETEIFMELSQVLPLKNDDVNQLDKASVMRITIAFLKIREMLQ FVPSLRDCKETPSGIKQDIDEPEVKPKLELSSEEWLDGTAEASHLLKETMDGFLLVLSHE GDITYVSENVVEHLGITKIDTLGQPIWEYSHQCDHAEIKEALSLKRHGTAVKDEQQLESG LSTHHRDLFVRLKCTLTSRGRSINIKSATYKVIHITGHLVVNGKGERVLIAIGRPIPHPS NIEIPLGTSTFLTKHSLDMRFTYVDDKMLGLLGYAPNDLLDTSLFVCQHGADSERLMATF KSVLSKGQGETCRYRFLGKCGGYCWIVSQATIVYDKQKPQSVVCVNYVISNLENKHEIYS LAQQTAASEQKEQQQQQQQQQQHQQASSDIDKNNKNNTTETATTTASEEETSNCETAKKI EAPIELEEKPQSIPIPISIVSEESATEINNNPEPDPEPELLAAKKTPIPAEISAAAAATN PPTATTTTTTTETATPLTNQQQQQLQAEELHIKRENHSPGPRTITSQLISNNNNSNCGGS LRIEEKRPKSVTASVFRPSPAPPLTPPAISISPAAGGGAGFKKTAEPTLPPTTTATAAIL SSSNQQQPQQQNLQATQDMSKGFLSFADDGRGLTMLKEEPDDLSHHLASTACIQLDEMTP FSDMLVGLMSSCLLPDEINSLDSTTCSTTASVAPHYQRSSGHSHSGSQSSSYASSPLSPL TPTEVVTTAAGASNGSTPSHQSNSQHQHQHHDNSNSSSSNIDPLFNYREESNDTSCSQHL HSPSITSKSPEDSSLPSLCSPSSLTQEDDFSFVDFGMRAPYIPMGDDMPLLTETDLMWCP PEDLHGSMPKEIDAIQQLQLLQQQQHHHQQQQAYSQYNQQQQQQQQQQQQQQHFSNSLCS SPASTVSSLSPSPVQQHQHQQQHHQQQQQAGGVFTTDSSELAALLCGTGNGTLSILGGSG GPAAEECAERLQQQQQHQQQEATSDFRSFQQLQQELQLQEEQQQQEQQQQEEEQRQQQLL SLSNSECKKEKYEVPMAPSLSHSIEDAFENDYSKDSSNLDCWDLLQINMAEAAVSPAASS SPCKATTIQLLQHQQQQQNVILNAVPLITIQNNKSMLQQQQQQQQQEQLQELMLTTKQQA PTATMKLLNGASIAPVTTKATIRLVESKPQQTTTQQQQRLGKPAIQQILVPQQQQQHGSK RHLNSQTSQGNPVESKRLKSGTICLDVQSPQLLQQLIGKDSAQQQTLAGKRAAGDRWQQT AEGKQQQKLQQQQQSNSVLKNLLVSGRDVTEPEDVSEPMIIDDNCLDQDQTGPKSPPLGG YGKYGFPLHCHTSTSAVLRNYHHNPLISGTNFQLSPVFSGSDAGGGDGDAGSVVSLDDSV PPGLTACDTDASSDSGIDENSLVDGSSVSPRKRVLITNSDRATGLEESAPPPLDVIPQQQ LVGEEEAEGCHNGSSAPSRKASISFLDNSNPLLHTPAMMDLCNDDYIMSEGGFEFSESQL EQVLGWSEIV NT seq 4713 nt NT seq  +upstreamnt  +downstreamnt atggtttcgttaattgctacaatcgatgcggcagcggaggcgcaaaaacagcgtaacgcc gccgaccccgctgctgcttcttcgagcatctctgccactggcagcgcgctagccaaggct tctccaggatcaggatcgaacctgactgccagcggcaagcccaaggagaaacgcaggaac aacgagaagcgcaaggagaagtcccgcgatgcggcccgttgtcgccgctccaaggagacg gagatctttatggagctctcgcaggtgctgcccctgaagaacgacgatgtgaatcagctg gacaaggcctccgtgatgcgcatcacaatcgccttcctcaagatacgcgagatgctgcag tttgtgccgtctttgcgcgactgcaaagagacaccgtcgggaatcaagcaggacatcgac gagcccgaggtgaagcccaagctggagctgagcagcgaggagtggctcgatgggaccgca gaggccagccatttgctgaaggagaccatggacgggttcctgctggtgctctcccacgag ggcgacatcacctacgtctccgagaacgtggtcgagcacttgggcatcacaaagatcgac actctgggccagccgatctgggagtactcgcatcagtgcgaccacgcggaaatcaaggag gccctcagtctgaagcgccacggcacggccgtgaaggacgagcagcagctcgagtccggg ctgagcacccaccatcgggacctgttcgtgcgcctgaagtgcaccttgaccagccgcgga cgcagcatcaacatcaagagtgccacctacaaggtcattcacatcacgggacacttggtg gtcaatggcaagggtgagcgtgtgctcattgccatcgggcgacccataccgcacccctcg aacatcgagatacccctgggcaccagcaccttcctcaccaagcactcgctggacatgcgc ttcacctacgtggacgacaagatgctgggcttgctggggtatgcgcccaacgatctgctg gacacttcgctgtttgtctgccagcacggagccgactccgaacgcctcatggccaccttc aagagcgtgctgagcaagggacagggggagacctgtcggtaccgcttcctgggaaaatgc ggcggctactgctggatcgtcagccaggccacaatcgtctacgacaagcagaagccccag agcgtcgtctgcgtgaactacgtcatcagtaatcttgagaacaaacatgagatttactca ctcgctcagcaaacggcggcaagtgagcaaaaggaacaacaacaacaacaacaacaacaa caacaacaccaacaagcatcatctgacatcgataaaaacaacaaaaacaacaccacagaa acagcaacaacaacagcatcagaggaagaaacatcaaactgcgaaacagctaagaaaatc gaagctccaatagagcttgaggagaagccccaatcgattccgataccgatttcgattgtg agcgaggaatcggcgacggaaatcaacaacaatccagagccagatccagagccagagctg ttggcagcaaagaaaactccaattccagccgaaatttctgctgctgctgctgcaaccaac ccaccaacagcaacaacaacaacaacaacaactgaaacagcaacaccactcaccaaccaa caacaacaacaactgcaggcagaagaactccacatcaagcgagagaaccactcgccgggt ccccgcaccatcacatcacagctgatcagcaacaacaacaacagcaactgcggcggcagc ctgcggatcgaggagaagcgccccaagtcggtgactgcttcggtgttccggcccagtccg gcgccacctctcaccccaccagccatatccatatccccagcagcaggtggaggggcaggg ttcaagaaaacagcagagcccactctgccgccgacaacaactgcaacggcagcgattctc tcgtcgagcaatcagcagcagccacagcagcagaacctgcaagcgactcaagatatgagt aagggattcctatcattcgctgacgatggacgaggcctaacaatgctcaaggaggaaccc gacgatctgtcccaccatttggcctcgacggcctgcatccagctggacgagatgacgccc ttcagcgacatgctggtgggcctcatgagctcctgcctgctgccggacgaaatcaactcc ttggactcgaccacctgctcgacgacggccagcgtggcgccccactaccagaggagcagc ggccacagccacagcggcagccaaagcagcagctacgccagcagtcccctcagcccgctc acgcccacagaagtggtgaccacagcagcaggggcctccaacgggagcactcccagccac cagagcaacagccagcatcagcaccagcatcacgacaacagcaacagcagcagcagcaac atcgatccgctgttcaactaccgcgaggagtcgaacgacacgagctgctcccagcatctc cactcgcccagcatcacatcgaagagtcccgaggacagcagcctgccatcgctgtgcagc cccagttcgctgacccaggaggatgacttctcgttcgtggacttcgggatgcgcgccccc tacatcccgatgggcgatgacatgcccctgctcacggagacggacctcatgtggtgtccg cccgaggacctgcacggatccatgcccaaggagatcgatgccattcagcagttgcagctg ctccaacagcagcagcaccaccaccagcagcagcaggcatacagccagtacaaccagcaa cagcagcagcaacagcaacaacagcagcagcagcagcatttctccaactcattgtgctcg tcgcccgcatcgacagtgtcctccctgtcgccatcgccagtgcagcagcaccagcaccag cagcagcaccaccagcagcagcagcaggccggcggagtcttcaccaccgactcgagcgag ctggcagccctgctttgtggcacgggcaacggaacgctctccatcctgggagggagtggc ggacctgccgcagaggagtgcgccgagcgtctccagcagcagcagcagcatcagcagcag gaggccaccagcgactttcgcagcttccagcaattgcagcaggagttgcagttgcaggag gaacagcagcaacaggagcagcagcagcaggaggaggagcaacgccagcagcagctgctc agcctcagcaactcagagtgcaagaaggagaagtacgaggtgccgatggcccccagcctg agtcattccattgaggatgcatttgagaatgactacagcaaggattcctccaatctggac tgctgggacctgctgcagatcaacatggcagaggctgccgtcagtccggctgcctcgtcc tccccctgcaaggcgacgaccatccagctgctgcagcaccaacagcagcagcagaacgtc atcctgaatgccgttccattgataaccattcagaacaacaagagcatgctgcaacagcaa cagcaacagcagcagcaggagcagctgcaggagctgatgctgaccaccaagcagcaggcg cccaccgccaccatgaagctgctgaacggagcgagcattgcgccagtgaccacgaaggcc accattcgactggtggagagcaagccgcagcagacaacgacgcagcagcagcagcgcctt ggaaagccagccatacagcagattcttgtgccccagcagcagcagcagcacggaagcaag cgtcacctgaacagccagacgagccaggggaacccggtggaatcgaagcgcctgaagagc ggcaccatctgcctggatgtgcagtcgccgcagctgctacagcagctgatcggcaaggac tcggcccagcagcagacgctggctggcaagcgggcggccggcgaccgctggcagcagacc gcggagggcaagcagcagcagaagctccagcagcagcagcagtcgaactcggtgctgaag aacctcctcgtcagcggacgtgacgttaccgagcccgaagacgtctccgaaccgatgatt atagacgacaattgcctggatcaggatcagaccggaccgaaatcgcctccgcttggcggc tacggcaagtacggatttcccctgcactgtcacacctccacgtcggccgtgctccgtaac tatcaccacaatccgctgatcagcggcaccaacttccagctgtcgccggtcttcagcggc tctgacgcgggcggaggcgatggcgatgccgggtcagtggtctctttggacgactccgtg ccgccgggcctgacggcctgcgacacagatgcctccagcgacagcggcatcgacgagaac agcctcgtcgacggatcatcggtgtcgccacgcaaacgggtgctcatcacgaacagcgac agggccactggactggaggagtctgcgcctccgcctctcgatgtaatcccacagcagcaa ctggtgggcgaggaggaggccgaaggatgccacaacggtagcagcgctcccagcaggaag gcctcgatatcgtttttggacaacagcaatcccctgctgcacaccccggccatgatggac ctctgcaacgacgactacatcatgagcgagggtggcttcgagttcagcgagagtcaattg gagcaggtgctcggctggtcggagatcgtttag

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