Drosophila pseudoobscura: 4800671
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Entry
4800671 CDS
T01032
Name
(RefSeq) protein CASC3
KO
K14323
protein CASC3
Organism
dpo
Drosophila pseudoobscura
Pathway
dpo03013
Nucleocytoplasmic transport
dpo03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
dpo00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
4800671
03015 mRNA surveillance pathway
4800671
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dpo03019
]
4800671
Messenger RNA biogenesis [BR:
dpo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
4800671
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Btz
Motif
Other DBs
NCBI-GeneID:
4800671
NCBI-ProteinID:
XP_001357903
UniProt:
A0A6I8UMS7
LinkDB
All DBs
Position
2:4171609..4174648
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AA seq
830 aa
AA seq
DB search
MAEVEKMTAAPPTDIPVSSPNASEAGGGSSSTAELGTSPNQEPSSNSHPHDSEYDTASDL
EGGEDYDDDDDESGSEEDSETDEDDVGSETTEDDRHSGTVSGNDNCQDRSVADSEAQKKV
DEDRSNPQYIPKRGTFYEHDDRTAETEGCLVPETENSSQVAPESNGDVNGVSASGTTPSG
QPPAISQASKTMKQWQPASGGDRWSHDRFEASEQAPKSRSELMQSYGYDIRNEDCAPRAR
RRRRYTRGPSKYSRNWEDEQAYLKASNKERKPPRPQDFPALNERKPRGPRTSSFREEKEN
RRSERGADKPQGGGGGSAGGASGSNPAPRAQEVERERERGDRDREREPKNRNYGRVNGGP
GRQNPMEFKPKSNRGPPPDRRERNERGERERERDREQEHVDQRNERAHQKPSTPRSNGQG
RQSTDGPILQQSQQQPPQQQQPRQSPQQVQPPPLAAPQTQLSTTNLSQRLQQVQQRNDPS
HVGSVQMHSLANQNQQQQQLQLTQQPQPAVPEPRTAPKRYSSLRRSQQEASQHLAEQQQQ
QQLQQQLHLQQQQQQQQQQQPSQIMIQDPHVLMQFAYQQQEIQAQLQTLQLGPAAATVPA
PPKQHAPPAAAYPQAQAAPYYVTGTDPVPVPVPVQVPVSVTVPPASPYVNPASAAYLPTT
PAAVAFAQAQTSVVTQPQPQPPAQAQPPAAVAGQAPPSMNFHQNYNTVGGTTYFVPPVQT
TSRPAALPQRRPTNAIPILPPSEKHKARPGGLAGSNANQTTNAKEEGGHTDNIDHIIDNM
FVQRPAFQPPATGEAAAAGAKEDVANSNPILPALAAAEQNLQPVPAVGQE
NT seq
2493 nt
NT seq
+upstream
nt +downstream
nt
atggccgaagtagagaaaatgactgcggctccgccgaccgatatacccgtctcctcgcca
aatgccagtgaagcggggggtggtagcagcagcactgccgaactggggacatcccccaac
caagagccgtcgagcaactcccatccccacgactccgagtacgacactgccagcgatctg
gagggcggcgaggactacgatgacgacgacgatgagagcggcagcgaggaggattcggag
acggatgaggacgatgtgggcagcgagaccaccgaggatgataggcacagcggcacggtc
agcggcaacgacaattgccaggacagatctgtggccgacagcgaggcgcagaagaaagtc
gacgaagatcgcagcaatccgcagtacataccgaaacgcggcaccttctatgagcacgat
gaccgcacggccgaaaccgagggctgcctggtccccgagacggagaacagctctcaggta
gcaccagagtcaaacggtgacgtcaacggggtctctgcctcgggcaccacacccagtgga
cagccaccagccatatcgcaggcttccaagaccatgaagcagtggcagccggcctctggt
ggcgaccgctggtcccatgataggttcgaagccagcgaacaggcccccaagtcgcgctcg
gagctcatgcagtcctatggctatgacatacggaatgaggattgtgcaccacgtgcccga
cgtcgcagaaggtacacgcgtggccccagcaagtactctcgcaactgggaggacgagcag
gcgtatctgaaggccagcaacaaagaacgcaagccaccccgacctcaggacttcccggca
ctaaatgagcgaaagccgcgtggcccacgcacttcctccttccgggaggagaaggaaaat
cgccgctcagaacgcggtgccgacaaaccacaaggaggcggaggtggaagtgcaggcggt
gcgagcggctcgaatcccgccccacgagctcaggaagtagagcgcgagcgtgaacgtgga
gatcgggatagggagcgtgagccaaagaaccgcaactatgggcgcgtgaatggcggtccg
ggtcgacagaatcccatggagttcaagccaaagtcaaatcgtggtcccccgcccgaccgt
cgtgagcgtaatgagcggggagaacgtgagcgcgagcgcgaccgtgagcaggagcatgtg
gatcagcgcaacgagcgtgctcatcagaagccatctactcccagatcaaacggacagggc
aggcagtcgacggatggcccaattcttcagcagagccagcaacagccgccgcagcagcag
cagccgagacagtccccacagcaggtgcagccgcctccactggcggcgccccagactcag
ctttcgaccactaatctgtcgcagcgactgcagcaggtgcagcagcgcaacgaccccagt
catgtaggaagcgttcagatgcattctctggccaaccagaaccaacagcagcagcagctg
cagctaacgcagcagccacagccggcagtcccagagccaaggactgcacccaaacgatac
tccagtctccgtcgctcccagcaggaggcatcccagcacttggcagagcagcagcagcaa
caacaactgcagcagcagctgcatcttcaacagcagcagcaacagcaacaacaacagcag
ccctcacagattatgatacaggatccccatgtcctgatgcagtttgcctatcagcagcaa
gagattcaagcccaactccagacactgcaactgggaccggcagcagcgaccgtgccagcg
ccaccaaagcaacatgccccgccagcggcagcctatccccaggcacaggcggcaccctat
tacgtgactggaacggatccggtaccggtgccggtgcctgttcaggtcccagtttcggtg
actgtacccccagcttccccctatgttaatccggcgagtgccgcctacttgcccaccaca
ccggcagctgtggcctttgcccaggcccagacgtccgtggtgacgcagccacagccacag
ccgccggcccaggcgcagccgccagctgcggtggctggccaggcgccaccgtccatgaac
ttccatcagaactacaatacggtcgggggcacaacatactttgtgccgcctgtccagacc
accagccgacctgctgccttgccccagcgtcgacccaccaatgcgattcccattctaccg
ccatccgagaagcataaggcgcgacccggaggattagcagggtcaaatgccaaccagacg
accaatgccaaggaggagggcggccacacagacaacattgaccacatcattgacaacatg
tttgtgcagcggcctgcattccagccgccggccactggagaggctgcggctgcgggtgcc
aaggaggatgtggccaatagcaatcccatccttccggcactggcggcagccgaacagaac
ctccagcctgtgccggctgttgggcaggaatga
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