Drosophila pseudoobscura: 4801021
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Entry
4801021 CDS
T01032
Name
(RefSeq) exosome complex component RRP46
KO
K12590
exosome complex component RRP46
Organism
dpo
Drosophila pseudoobscura
Pathway
dpo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dpo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
4801021
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dpo03019
]
4801021
Messenger RNA biogenesis [BR:
dpo03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
4801021
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
4801021
NCBI-ProteinID:
XP_001358191
UniProt:
A0A6I8UN81
LinkDB
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Position
2:complement(7622337..7623276)
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AA seq
234 aa
AA seq
DB search
MNLPDKSEQVAKDKLREMQCKFNPLSRCDGSVMYCQGATVVISAVLGPVEVKTQNLSIDG
SYLECNYRPKAGLPQVKERIREAAVRDVLELALLSEAYPRSKMSLQIQELEDRGSIDACA
LNSACLAMLIGGLPLKCSFAAVHCIINEQGEYILDPDQRETEHERASFTFAFDSLEGNLL
LVQTKGSFKIAEFNDVESLCRSASAEILQFYRTSISNYHCRRSDTKTSEEQMET
NT seq
705 nt
NT seq
+upstream
nt +downstream
nt
atgaatttacccgacaagtctgagcaggtggccaaggataagctgcgcgaaatgcagtgc
aagttcaatcccctctcgcgctgcgacggttccgtcatgtattgccagggagcaactgtt
gttatatccgctgttctgggtcccgtcgaggtgaagacacagaatctgagcatagacgga
agctatctggagtgcaactataggccgaaggcaggtctgccgcaggtcaaggagcgcatt
cgagaagctgccgttcgggacgtgctggagctggccctgctgtccgaggcctatccgcgc
tcaaagatgtctctgcagatacaggagctggaggatagaggaagtatcgatgcctgtgcc
ctgaactccgcttgcctggcgatgctcattggtggcctgcccctgaaatgcagttttgcg
gcagtccactgcattatcaatgaacagggagagtatattctagacccggaccaaagagaa
acggagcatgagcgagccagtttcaccttcgccttcgactcgctggagggaaatctcctg
ctggtgcagacaaaggggtcctttaaaatagccgaattcaatgacgtggagagtctgtgc
cgatcggccagtgcggaaatcttgcagttctatcgcaccagcatttcaaattatcattgc
agaaggtccgatacaaagaccagcgaagagcaaatggaaacgtaa
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