KEGG   Drosophila pseudoobscura: 4801021
Entry
4801021           CDS       T01032                                 
Name
(RefSeq) exosome complex component RRP46
  KO
K12590  exosome complex component RRP46
Organism
dpo  Drosophila pseudoobscura
Pathway
dpo03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:dpo00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    4801021
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:dpo03019]
    4801021
Messenger RNA biogenesis [BR:dpo03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     4801021
SSDB
Motif
Pfam: RNase_PH RNase_PH_C
Other DBs
NCBI-GeneID: 4801021
NCBI-ProteinID: XP_001358191
UniProt: A0A6I8UN81
LinkDB
Position
2:complement(7622337..7623276)
AA seq 234 aa
MNLPDKSEQVAKDKLREMQCKFNPLSRCDGSVMYCQGATVVISAVLGPVEVKTQNLSIDG
SYLECNYRPKAGLPQVKERIREAAVRDVLELALLSEAYPRSKMSLQIQELEDRGSIDACA
LNSACLAMLIGGLPLKCSFAAVHCIINEQGEYILDPDQRETEHERASFTFAFDSLEGNLL
LVQTKGSFKIAEFNDVESLCRSASAEILQFYRTSISNYHCRRSDTKTSEEQMET
NT seq 705 nt   +upstreamnt  +downstreamnt
atgaatttacccgacaagtctgagcaggtggccaaggataagctgcgcgaaatgcagtgc
aagttcaatcccctctcgcgctgcgacggttccgtcatgtattgccagggagcaactgtt
gttatatccgctgttctgggtcccgtcgaggtgaagacacagaatctgagcatagacgga
agctatctggagtgcaactataggccgaaggcaggtctgccgcaggtcaaggagcgcatt
cgagaagctgccgttcgggacgtgctggagctggccctgctgtccgaggcctatccgcgc
tcaaagatgtctctgcagatacaggagctggaggatagaggaagtatcgatgcctgtgcc
ctgaactccgcttgcctggcgatgctcattggtggcctgcccctgaaatgcagttttgcg
gcagtccactgcattatcaatgaacagggagagtatattctagacccggaccaaagagaa
acggagcatgagcgagccagtttcaccttcgccttcgactcgctggagggaaatctcctg
ctggtgcagacaaaggggtcctttaaaatagccgaattcaatgacgtggagagtctgtgc
cgatcggccagtgcggaaatcttgcagttctatcgcaccagcatttcaaattatcattgc
agaaggtccgatacaaagaccagcgaagagcaaatggaaacgtaa

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