Drosophila pseudoobscura: 4801068
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Entry
4801068 CDS
T01032
Name
(RefSeq) exosome component 10
KO
K12591
exosome complex exonuclease RRP6 [EC:3.1.13.-]
Organism
dpo
Drosophila pseudoobscura
Pathway
dpo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dpo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
4801068
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dpo03019
]
4801068
Messenger RNA biogenesis [BR:
dpo03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Exosome cofactors
4801068
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol_A_exo1
PMC2NT
HRDC
Motif
Other DBs
NCBI-GeneID:
4801068
NCBI-ProteinID:
XP_001358230
UniProt:
A0A6I8UN99
LinkDB
All DBs
Position
2:complement(8166117..8169731)
Genome browser
AA seq
905 aa
AA seq
DB search
MQRSLKRKQDDQAEDDQPEQPPKIESAPAPDSGIGDIKDFTKQAFKNVVAATRACNSFPQ
GTARSLYLGYPGYSRVIDDLSQRLMGLIGSVMQAEEIKGDIKKRHTEEQFEMVQECNDII
FERITTNLDIKAGQRRKPHMVLETQVDVMSPSTPAATAPAEFAKSETPKAGSWNRWPPTP
QRNVLSARLFAAKNIMRPQMNFKTPVDNSDQNPFVPRLKEKPNSLKPLALLPEYDEAGNV
HAYLHPYEFELMKLEPSAEQLQRQTPLLPAPPAATELMLVDSVEKLNQALEELRRAPHIA
IDVEHHSYRTFMGITCLVQMSTRTKDYIFDSLALREEMHVLNLVLTDPKKVKILHGADQD
IEWLQRDLSLYVVNMFDTHRAAKALNMARLSLAFLLKHYVDLDVDKSLQLADWRMRPLPQ
QLIDYARQDTHYLIYVYERMTNDLLQAEQGQSQALRTVYQLSTEVCKKRYTKPHVGPESH
LDLVRKTKRSFDNRQLHALRGIFQWRDATARQEDESYGYVLPNHMMLQIAESLPREMQGI
LACCNPIPPLVRQQLHALHQIVLKAREQPLVKPILEARSQPQVLPPTSKDYGSKLYCPHD
FTHLEETRDDLPTLLNRNASGKLQLPAVEEQPRDDVPLAVPAMTLFAKPTVSTPDEEMRL
VHLRKESQVLRMPYKRYLAILPLMEQVKADQRARDSKELLKRRLCPPATPTEDIKLESSS
GKVEAADDAVYSLPLKEQLKRKHKPDSDQHPSTSKRLKEGNIKPKPESAPVPVRGAVKNE
SITCISDEDDDVVEVPIQKKPIAQAAEAPSKRQQKRKQFQRFRGGKARGNHPQSSSQPVV
QQPKPQGNNFDYKNVDFRQFQGGAQRARGTEIKQTIRGKNRPNNRNNKQFNKLFTFSNVK
KDGKK
NT seq
2718 nt
NT seq
+upstream
nt +downstream
nt
atgcagcgttcattgaaaagaaaacaggatgatcaggcggaggatgatcagcctgagcag
ccgccgaaaatagaatcagcgccagcaccagacagtggcattggcgatattaaagatttc
acaaagcaagcctttaagaatgtggtggccgccacacgtgcctgcaactcctttccacag
ggaaccgcccgctccctatatctgggctatccggggtattcgcgtgtcatagacgatctg
tcccagcggctaatgggcctcataggaagcgtgatgcaggccgaagagatcaagggggac
attaaaaaacgccacacggaggaacagttcgaaatggtccaggagtgcaacgatataatc
ttcgagcgtattacgacgaatctggacatcaaagctggccagcggaggaaaccacacatg
gtgctggagacgcaggtggatgttatgagcccctccacgccagcggcgacggcaccagca
gagttcgccaagtcggaaaccccaaaggcgggaagctggaacaggtggccgcccacgccg
cagcgtaacgtgctctccgctcgcctgttcgcagccaagaacataatgcggccccagatg
aatttcaagacgccagtggacaacagtgatcaaaatccgtttgtgccacgcctcaaggag
aagccaaactccttgaagccgctggcactgctgccagagtacgacgaggcgggaaatgta
catgcctatctgcatccgtacgagtttgagctgatgaagctggagccgtcggcggagcag
ctccagaggcagacgcctctgctgcctgctccgcccgcggctactgagctgatgctcgtc
gacagtgtggaaaagttgaaccaggccctggaagagctgcgacgggcgccccacatagcc
atcgatgtagagcaccactcgtatcgcacattcatgggcatcacctgcttggtgcagatg
tccacccgcaccaaggactacatattcgacagtctcgcgctgcgcgaggagatgcacgtc
ctgaacctggtactaacggatccaaagaaggtgaagatcctccacggcgctgaccaggac
atcgagtggctgcagcgcgatctttcgctgtacgtcgtcaacatgttcgacacccatcgg
gcggctaaggccctaaatatggctcgcctgtcgctggcctttctcctcaaacactacgtg
gacctggacgtagacaagagcctccagctggccgactggcgcatgcggccgctgccccag
cagcttatcgactacgcccgccaggacacgcattatttgatttacgtgtacgagcgtatg
accaacgacctgctgcaggccgagcaaggacagtcgcaggccctgcgaaccgtctaccag
ctgagtacggaagtgtgcaagaagcgctacacgaaaccccacgtcggacccgaatcgcat
cttgatctggtgcgaaaaacgaagcggtccttcgacaaccgacagctgcacgccttgcgt
ggcattttccagtggcgggatgcgactgcgcgccaagaggacgaaagctacggctatgtg
ctgcccaatcacatgatgctccagattgccgagagcctgccccgggagatgcaggggatt
ctcgcctgctgcaatcccataccgccgctggtgcgccagcagctgcacgcgctccaccag
atcgtgctgaaggcgcgcgaacagccgctggttaaacccattctggaagcccgcagccaa
ccgcaggtcctgccacccaccagcaaggactacggcagcaaactctactgtccgcacgac
ttcacgcacttggaggagacgcgcgatgacctgcccacgctgctcaaccgcaacgcgtcg
ggaaagctgcagctgccagcggtggaggagcaacccagagacgatgtccccctggcggtg
ccggccatgaccctgttcgccaagccaaccgtttccactccggacgaagagatgcgtctg
gtgcacttgcgcaaggagagccaggtgctgcgcatgccctataaacgctacctggccatc
cttccgctcatggagcaggtgaaggccgaccagcgggcacgggacagcaaagaactgctc
aagcgtcgtctctgcccgccagcgaccccgacagaggacatcaaattggagtcctcatca
ggtaaggtcgaggcggcagatgatgccgtctacagcctgccgctaaaggaacagctgaag
cgtaagcacaaacccgactctgaccagcatcccagcaccagcaagcgattgaaggagggg
aacatcaaacccaagccagagtcagcgccagtgccagtgcggggagcagtgaagaacgag
tcaataacctgcatcagtgacgaggacgacgatgtcgtagaagttcctatacagaaaaag
cccatagcacaggcagcggaagcaccgagcaagcgccagcagaagcgtaaacagttccag
cgattcagggggggcaaggctcgcggcaatcatccccagagctccagtcaaccggtggtc
cagcagcccaagccacagggcaacaactttgactacaagaacgtggacttccggcagttc
cagggcggagcacaacgagcccgtggcacagagatcaagcagacaatacgcggaaagaat
cgtcccaacaatcggaataacaagcagtttaacaagctttttacatttagtaatgtaaag
aaagatggcaagaaatag
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