Drosophila pseudoobscura: 4801431
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Entry
4801431 CDS
T01032
Name
(RefSeq) cleavage and polyadenylation specificity factor 73
KO
K14403
cleavage and polyadenylation specificity factor subunit 3 [EC:3.1.27.-]
Organism
dpo
Drosophila pseudoobscura
Pathway
dpo03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
dpo00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
4801431
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dpo03021
]
4801431
03019 Messenger RNA biogenesis [BR:
dpo03019
]
4801431
Transcription machinery [BR:
dpo03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
4801431
Messenger RNA biogenesis [BR:
dpo03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
4801431
U7-dependent histone pre-mRNA processing factors
4801431
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CPSF73-100_C
Beta-Casp
Lactamase_B_6
Lactamase_B
RMMBL
Anti-Pycsar_Apyc1
Lactamase_B_2
Lactamase_B_3
Motif
Other DBs
NCBI-GeneID:
4801431
NCBI-ProteinID:
XP_001358526
UniProt:
A0A6I8UP18
LinkDB
All DBs
Position
2:11971148..11973592
Genome browser
AA seq
684 aa
AA seq
DB search
MSQATNDVRVPDEESDLLQIKPLGAGQEVGRSCIMLEFKGKKIMLDCGIHPGLSGMDALP
YVDLIEADEIDLLFISHFHLDHCGALPWFLMKTSFKGRCFMTHATKAIYRWMLSDYIKIS
NISTEQMLYTEADLEASMEKIETINFHEERDVMGVRFCAYNAGHVLGAAMFMIEIAGIKI
LYTGDFSRQEDRHLMAAEVPPMKPDVLITESTYGTHIHEKREDRENRFTSLVQKTVLQGG
RCLIPVFALGRAQELLLILDEFWSQNPELHEIPIYYASSLAKKCMAVYQTYINAMNDRIR
RQIAVNNPFVFRHISNLKGIDHFEDIGPCVIMASPGMMQSGLSRELFESWCTDPKNGVII
AGYCVEGTLAKTILSEPEEITTLSGQKLPLNMSVDYISFSAHTDYQQTSEFIRLLRPTHV
VLVHGEQNEMSRLKLALQREYEADASTDIKFYNPRNTHAVDLYFRGEKTAKVMGNLAAKN
PEVGSKLSGVLVKRDFKYHLLAPSDLGKYTDMSMSVVTQRQSIPWTSSLGTLELLLDRIG
AGCVEVVEPERKLRVFNCIELTVEQKIIVMEWQATHVNDVYADAVLACIMQSELGGTSLK
GATKQTKSESSRFRECLIETLQDTFGDSCVPKMFKGDLLPVTVSGKRAEINLETLAVHCA
EDDILRQMLNTTVHKLHQTLVSAH
NT seq
2055 nt
NT seq
+upstream
nt +downstream
nt
atgtctcaggccacgaacgatgtccgcgtgccggacgaggagagcgatctgctgcaaatc
aaaccgcttggcgccggtcaagaagtgggacgttcctgcatcatgttggagtttaaggga
aagaagatcatgctcgactgcggtatccaccccgggctatccggcatggatgcgctgccc
tacgtggacttaatagaggcggacgagatcgacctactcttcatttcacacttccatttg
gatcactgtggggccctgccctggttcctgatgaagaccagtttcaaaggacgttgcttc
atgacgcacgccaccaaggccatttaccgatggatgctctcggattacattaaaatcagc
aacatatccacggagcagatgctctacacagaagccgacctggaggcttcgatggagaaa
atcgagacaattaattttcacgaggagcgcgatgtcatgggcgtccgtttttgcgcctac
aatgctggccatgtgctgggggccgcgatgtttatgattgaaattgcgggcatcaaaatc
ctatacactggcgacttctcacggcaggaggatcgccacttgatggccgcagaggtgccg
ccgatgaagcccgatgtcctcatcaccgagtccacctacggcacgcacatccacgagaag
cgcgaggaccgcgagaatcgtttcacatcgctggtgcagaagaccgttctgcaaggaggt
cgctgcctgattcccgtgttcgccctgggccgagcccaggagttgttattgattttggac
gagttctggtcgcagaatcccgaactacacgagatacccatctactatgcctcgtcgctg
gccaaaaagtgcatggccgtctaccaaacgtatataaacgccatgaatgaccgaatcagg
cggcagatagccgtcaacaatccctttgtctttcgacacatctccaacctgaagggcatc
gatcacttcgaggacattgggccctgtgtaatcatggcatcgcccggcatgatgcagtcg
gggctgtcgcgcgagctattcgagagctggtgcacagaccccaagaatggcgtcatcatt
gccggctactgtgtggagggcactctggcgaagaccattctctcggagccggaggagatt
accacgctctcgggccagaagctgcccctcaacatgtccgtcgactacatctccttctcg
gcgcacacggactaccagcagaccagcgaattcatacgccttctgcggcccacccatgtg
gtcctcgtccacggggaacagaacgaaatgtcgcgcctgaagctggccctgcagcgcgag
tacgaggccgatgccagcaccgacatcaagttctacaatccccgcaacacacatgccgtc
gatctgtatttccggggcgagaagacagccaaggtgatgggcaatctggcggccaagaac
cccgaagttggcagcaagctctccggcgtgctggttaagcgcgacttcaagtatcatctt
ctggccccctccgatctcggcaagtacacggacatgagcatgtcggtggtgacgcagcgg
cagtcgataccctggaccagctctctgggcaccctggagcttctgctggatcgcattgga
gcgggctgtgtggaggtggttgagccagaacgcaagctgcgcgtcttcaactgcattgag
ttgaccgtcgagcagaagatcattgtcatggagtggcaggcaacgcatgtcaacgatgtc
tacgccgatgcggtcctcgcctgcatcatgcagtccgagctgggcggcaccagcctcaaa
ggcgccaccaagcaaaccaagtcggagagctctcgcttccgggaatgcctcattgagaca
ctgcaagatacattcggcgacagctgtgtaccaaagatgttcaagggggatctgctccca
gtgactgtgagtgggaagcgggcggagattaatctggagaccctggctgttcattgtgcg
gaagacgatattctgcgccaaatgctcaacacaacagtgcataagctccaccagaccctg
gtctcagctcactga
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