Drosophila pseudoobscura: 4801630
Help
Entry
4801630 CDS
T01032
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB2
KO
K03010
DNA-directed RNA polymerase II subunit RPB2 [EC:
2.7.7.6
]
Organism
dpo
Drosophila pseudoobscura
Pathway
dpo03020
RNA polymerase
dpo03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
dpo00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
4801630
09124 Replication and repair
03420 Nucleotide excision repair
4801630
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dpo03021
]
4801630
03400 DNA repair and recombination proteins [BR:
dpo03400
]
4801630
Enzymes [BR:
dpo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
4801630
Transcription machinery [BR:
dpo03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
4801630
DNA repair and recombination proteins [BR:
dpo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
4801630
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_4
RNA_pol_Rpb2_3
RNA_pol_Rpb2_5
DUF5817
Motif
Other DBs
NCBI-GeneID:
4801630
NCBI-ProteinID:
XP_001358686
UniProt:
A0A6I8UPE4
LinkDB
All DBs
Position
2:complement(13793218..13797281)
Genome browser
AA seq
1176 aa
AA seq
DB search
MMYDNEEELFEEENAEEISHELWQEACWIVINAYFDEKGLVRQQLDSFDEFIQMSVQRIV
EDSPAIELQAEAQHTSGEVETPPRFSLKFEQIYLSKPTHWEKDGSPSPMMPNEARLRNLT
YSAPLYVDITKTKNVEGLDPVETQHQKTFIGKIPIMLRSTYCLLSQLTDRDLTELNECPL
DPGGYFIINGSEKVLIAQEKMATNTVYVFSMKDGKYAFKTEIRSCLEHSSRPTSTLWVNM
MARGSQNIKKSAIGQRIIAILPYIKQEIPIMIVFRALGFVADRDILEHIIYDFDDPEMME
MVKPSLDEAFVVQEQNVALNFIGARGARPGVTKDKRIKYAKEILQKEMLPHVGVSDFCET
KKAYFLGYMVHRLLLASLGRRELDDRDHYGNKRLDLAGPLLAFLFRGLFKNLMKEVRMYT
QKFIDRGKDFNLELAIKTNIITDGLRYSLATGNWGDQKKAHQARAGVSQVLNRLTFASTL
SHLRRVNSPIGRDGKLAKPRQLHNTLWGMLCPAETPEGAAVGLVKNLALMAYISVGSQPS
PILEFLEEWSMENLEEIAPSAIADATKIFVNGCWVGIHRDPEQLMATLRKLRRQMDIIVS
EVSMIRDIRDREIRIYTDAGRICRPLLIVENGSLLLKKTHVEMLKERDYNNYSWQVLVAS
GVVEYIDTLEEETVMIAMSPYDLKQDKDYAYCTTYTHCEIHPAMILGVCASIIPFPDHNQ
SPRNTYQSAMGKQAMGVYITNFHVRMDTLAHVLYYPMKPLVTTRSMEYLRFRELPAGINS
IVAILCYTGYNQEDSVILNASAVERGFFRSVFYRSYKDSENKRVGDQEENFEKPHRGTCQ
GMRNAHYDKLDDDGIIAPGIRVSGDDVVIGKTITLPENDDELDSNTKRFAKRDASTFLRN
SETGIVDQVMLTLNSEGYKFCKIRVRSVRIPQIGDKFASRHGQKGTCGIQYRQEDMPFTC
EGLAPDIIINPHAIPSRMTIGHLIECLQGKLGSNKGEIGDATPFNDAVNVQKISTFLQEY
GYHLRGNEVMYNGHTGRKINAQVFLGPTYYQRLKHMVDDKIHSRARGPVQILVRQPMEGR
ARDGGLRFGEMERDCQISHGAAQFLRERLFEVSDPYRVHICNFCGLIAIANLRNNTFECK
GCKNKTQISQVRLPYAAKLLFQELMSMNIAPRLMVN
NT seq
3531 nt
NT seq
+upstream
nt +downstream
nt
atgatgtacgacaacgaggaagagctgttcgaggaggagaatgcagaggagatctcccac
gagttgtggcaggaggcctgctggatcgtaatcaacgcgtacttcgatgagaagggtctg
gtgcggcagcagctggacagcttcgatgagttcattcagatgtctgtgcagcgcattgtg
gaggactcgccggccatcgagctgcaggcagaggcacagcacacatccggggaggtggag
acgccgccgagattctcgcttaagttcgaacagatctatctgtcgaagccgacgcattgg
gagaaggatggttcacccagtcccatgatgccgaacgaggcgcgtctgcggaacctcacc
tactcggcccccctgtacgtggacatcacaaagacaaagaatgtggagggcctggatccc
gtggagacgcagcaccagaagaccttcatcggcaagattcccattatgctgagatccacg
tactgcctgctctcccagctgacggatcgtgatttgaccgagttgaacgaatgcccgctg
gatcccggcggctacttcatcatcaacggctccgagaaggtgctgattgcccaggagaag
atggccacgaacaccgtgtatgttttcagcatgaaggatggcaagtacgccttcaagaca
gagatacgctcctgcctggagcatagctcgcgacccacgtccacgctctgggtgaacatg
atggcccgaggctcgcagaacatcaagaaatccgccattggccagaggatcatcgccatc
ctgccgtacattaagcaggagatacccattatgattgtgttccgtgccctgggattcgtg
gccgatcgcgacatcctcgagcacatcatctacgattttgacgatccggagatgatggaa
atggtgaagccatctctggacgaggccttcgtggtgcaggagcaaaacgtggccctcaac
ttcatcggagcgcgaggcgcccggcccggcgtgacgaaggacaagcgtataaagtacgcc
aaggagatcctgcagaaggaaatgctgccccatgtgggtgtctccgatttctgcgaaaca
aagaaagcgtatttcctcggctacatggtgcaccggctgctgctggcttcgctgggtcgc
cgagagctggacgatcgcgatcattacggcaacaagcgcctggatctggccggaccactg
ctggccttcctcttccgcggcctcttcaagaacctgatgaaggaggtgcgaatgtacaca
cagaagttcatcgatcgtggaaaggacttcaatctggagctggccatcaagacgaacatc
atcaccgacggcctgcgctactccctggccaccggcaactggggcgaccagaagaaggcc
catcaagcgcgtgccggtgtctcccaggtgctgaaccggctcaccttcgcctccaccttg
tcccatctgcgtcgcgttaactcgcccatcggccgcgacggaaagctggccaaaccccgc
cagctccacaacacgctctggggcatgctgtgtcccgccgagactccggagggagccgct
gtcggtttggtcaagaatctggctctgatggcctacatatccgtgggctcacagccgtca
cccattctggagttcttggaggagtggtccatggagaatctggaggagattgcaccctcg
gcgattgcggatgcgaccaaaatctttgttaacggctgctgggtgggcatccatagggat
cccgagcagctgatggccacgctccgaaaactacgtcgccagatggacattatcgtgtcg
gaggtgtcgatgatccgtgatattcgcgatcgtgagattaggatctacacggatgcgggt
cgcatttgtcggccgctgctgatcgtggagaatggatcgctgctgctgaagaagacccat
gtggagatgttgaaggagcgcgactacaacaactacagctggcaggtgctggtggcctcc
ggcgtggtggagtacatcgatacccttgaggaggaaacggtcatgatcgccatgtcgccg
tatgatctgaaacaggacaaggactatgcctactgtacgacctacacccactgcgagatt
catccggccatgatcctgggcgtctgcgcctccattatacccttccccgatcacaaccag
agtccgcgtaacacctatcaaagtgctatgggcaaacaagctatgggtgtgtacatcacc
aacttccatgtgcggatggacacgctggcccatgttctatactatcccatgaagccgctg
gtcaccacccgatccatggagtatctgcgcttcagagagctgcccgccggtatcaattcg
attgtggccattctctgctacacgggctacaaccaggaggattctgtcatcctgaatgcc
tcggcggtggagcgaggattcttccggtcggtgttctaccggtcgtataaggattcggag
aacaagcgtgtgggcgatcaggaggagaactttgagaaaccccatcgcggcacctgccag
ggcatgaggaatgcccactacgacaagctggacgacgacggcatcattgcccctggcatt
cgtgtctctggcgacgatgtggtgattggaaagaccatcaccctgccggagaacgacgac
gagctggatagcaacaccaagaggtttgccaagcgagatgcctccaccttcctgcgtaac
tccgagacgggcatcgtggaccaggtgatgctgaccctaaacagcgagggctacaagttc
tgcaagattcgagtgcgctccgtgcgcatcccacagatcggcgacaagtttgcctcccgt
cacggacagaagggaacgtgtgggatccagtatcggcaggaggacatgcccttcacctgc
gagggactggcccccgatatcattatcaatccccatgccatcccctctcgtatgacaatc
gggcatttaatcgagtgtctgcagggcaagctgggctccaacaagggggaaatcggtgat
gccacgcccttcaacgatgccgtcaacgtgcagaagatctccactttccttcaggagtat
ggctaccatctgcgtggcaacgaagtcatgtacaatggccacacaggacgcaagatcaat
gctcaggtgtttttgggacccacatactatcagcgcctgaagcatatggtggacgacaag
atccattcacgtgcccgcggccctgtccagattctagtgcgacagcctatggagggcaga
gcccgtgacggcggcctgcgtttcggtgagatggagcgcgattgccagatatctcacggt
gccgcccagttcctcagggagcgtctcttcgaggtctccgatccgtatcgcgtccacata
tgcaacttctgcggcctgatcgccatcgccaatctgcgcaacaacacgttcgagtgcaag
ggctgcaagaacaagacgcaaatctcccaggtgcgccttccgtacgcggccaagctgctt
ttccaggagctgatgtccatgaacattgcgccccgtctcatggtcaactga
DBGET
integrated database retrieval system
