KEGG   Drosophila pseudoobscura: 4801807
Entry
4801807           CDS       T01032                                 
Name
(RefSeq) THO complex subunit 3
  KO
K12880  THO complex subunit 3
Organism
dpo  Drosophila pseudoobscura
Pathway
dpo03013  Nucleocytoplasmic transport
dpo03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:dpo00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    4801807
  09122 Translation
   03013 Nucleocytoplasmic transport
    4801807
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:dpo03019]
    4801807
   03041 Spliceosome [BR:dpo03041]
    4801807
Messenger RNA biogenesis [BR:dpo03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     4801807
Spliceosome [BR:dpo03041]
 Complex C
  Other components
   EJC/TREX
    4801807
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    4801807
SSDB
Motif
Pfam: Beta-prop_THOC3 Beta-prop_IFT122_1st Beta-prop_WDR5 WD40_CDC20-Fz WD40 Beta-prop_WDR3_1st WD40_Prp19 WD40_WDHD1_1st Beta-prop_EML_2 WDR55 EIF3I ANAPC4_WD40 Beta-prop_RIG_2nd Beta-prop_WDR36-Utp21_2nd Beta-prop_CAF1B_HIR1 WD40_Gbeta Beta-prop_WDR19_1st Beta-prop_WDR3_2nd Beta-prop_TEP1_2nd Beta-prop_Aladin Beta-prop_IFT140_1st Beta-prop_NOL10_N Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_2nd Beta-prop_WDR35_TULP_N Beta-prop_WDR36-Utp21_1st Beta-prop_EML Beta-prop_Vps41 WDR90_beta-prop_4th eIF2A Beta-prop_HPS5 RMC1_N Tricorn_2nd WD40_MABP1-WDR62_1st DSE1_N Beta-prop_WDR75_1st NBCH_WD40 TRM82_WD Beta-prop_EIPR1 WD40_RFWD3 Beta-prop_ELP1_1st B-prop_COPA_B_2nd Beta-prop_NUP159_NUP214 PD40 Beta-prop_TEP1_C Beta-prop_DCAF12 PAC11 ASA1 Beta-prop_WDR41 DPPIV_N Beta-prop_Nup120_160 WD_LRWD1 Beta-prop_DCAF4 Tricorn_N
Other DBs
NCBI-GeneID: 4801807
NCBI-ProteinID: XP_001358841
UniProt: A0A6I8UPT3
LinkDB
Position
2
AA seq 320 aa
MNRTEQTFEDLRSFFRSHSKIREQRAHTSKVHSVCWNADGRHLASGSFDKTVAVYSLERD
RLIKGIIYRGHTASVDQLCWHKTDPNQFATASGDKTVRIWDIRAGKCASVTNTKGENINI
AWSPDGKTIAVGNKEDLITFIDTRTNKIRVEEQFSCEVNEISWNNTNDLFFLTNGMGCIN
VLSYPSLEHQLTLKGHPANCICIEFGPTGKYFATGSADAQVSLWDATELACLRMISRLEW
PVRTISFSHDERLIASASEDLLIDVAFTETGERITDIHVDASTFTVAWHPKQYLLAYACD
EKDVERRRDIGNVKIYGFPE
NT seq 963 nt   +upstreamnt  +downstreamnt
atgaaccgtacagagcagacatttgaggacttgaggtcgttctttcgaagtcacagcaaa
atacgcgagcagcgagcccacacgtccaaggtacactccgtctgctggaatgctgatggt
cgccacttggcatcgggttcgtttgacaagaccgtggcggtgtactccttggaacgcgat
cgcctcatcaagggcatcatctaccgggggcacaccgcgtccgtggaccagttgtgctgg
cacaaaaccgatccaaatcagtttgccactgcaagtggcgacaagaccgttcgcatctgg
gacatacgcgctgggaaatgtgcttcagtgaccaacaccaagggagagaacataaacata
gcctggtctccggatggcaagacgattgcggtgggcaacaaggaagacctaatcacattc
attgacacgcgcacgaacaaaatacgcgtcgaggagcagttcagctgtgaagtaaatgag
atatcatggaacaatacaaacgatttgttcttcctcaccaacggcatgggctgcattaat
gtgttaagctatcccagcctggagcaccaactgacactcaaagggcatcctgccaactgc
atttgcattgagttcggacccacaggtaaatattttgccactggttcagctgatgcccag
gtctcgctttgggacgccaccgaactggcctgcctgcgcatgattagccgcctggagtgg
cctgttcgtaccatatcctttagtcacgatgaacgactgatagcctctgccagcgaggat
ctcctcattgatgttgccttcacggagacgggggaacgtatcaccgacattcatgtcgat
gcctctactttcacggtggcctggcatccaaaacagtacctcttagcatatgcctgcgac
gagaaggacgtcgaacggcgccgcgatattggcaatgttaaaatatacggctttcctgag
tag

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