KEGG   Drosophila pseudoobscura: 4801837
Entry
4801837           CDS       T01032                                 
Name
(RefSeq) WD40 repeat-containing protein SMU1
  KO
K13111  WD40 repeat-containing protein SMU1
Organism
dpo  Drosophila pseudoobscura
Brite
KEGG Orthology (KO) [BR:dpo00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:dpo03041]
    4801837
Spliceosome [BR:dpo03041]
 Complex B
  Other components
   Complex B specific factors
    4801837
SSDB
Motif
Pfam: WD40 WD40_WDHD1_1st WD40_Prp19 Beta-prop_EML_2 WD40_CDC20-Fz Beta-prop_TEP1_2nd WDR55 WD40_MABP1-WDR62_2nd EIF3I Beta-prop_CAF1B_HIR1 ANAPC4_WD40 Beta-prop_EML Beta-prop_WDR90_POC16_2nd Beta-prop_WDR75_1st NBCH_WD40 LisH_TPL WDR90_beta-prop_4th Beta-prop_Nup120_160 Ge1_WD40 Beta-prop_RIG_2nd Beta-prop_TEP1_C Beta-prop_DCAF4 Beta-prop_NWD2_C Beta-prop_Vps41 WD40_MABP1-WDR62_1st Beta-prop_SPT8 WD40_RFWD3 Beta-prop_IFT140_1st Beta-prop_EIPR1 Beta-prop_IFT122_1st Beta-prop_NUP159_NUP214 Beta-prop_HPS5 Beta-prop_SCAP Beta-prop_WDR19_1st Beta-prop_WDR35_TULP_N Beta-prop_VPS8 Mala_s_1-like LisH_WDR26 WDR54 VPS8_N zf_topless TolB_like Beta-prop_WDR11_2nd
Other DBs
NCBI-GeneID: 4801837
NCBI-ProteinID: XP_001358870
UniProt: A0A6I8UPV2
LinkDB
Position
2:complement(15295114..15297672)
AA seq 509 aa
MSIEIESADVIRLIQQYLKESNLMKTLQTLQEETGVSLNTVDSVDGFVQDISNGHWDTVL
KVTQSLKLPDKKLLNLYEQIVLELIELRELGAARSLLRQTDPMSMLKQQEPERYIHLENM
LQRAYFDPREAYAEGSSKEKRRTAISQELSGEVHVVPSSRLLALLGQALKWQQHQGLLPP
GTTIDLFRGKAAMKDQEEEMYPTQLFRQIKFGQKSHVECAQFSPDGQYLITGSVDGFLEV
WNFTTGKVRKDLKYQAQDQFMMMEQAVLALNFSRDSEMVASGAQDGQIKVWRIITGQCLR
KFEKAHTKGITCLQFSRDNSQVLSASFDYTVRLHGLKSGKMLKEFKGHSSFVNEATFTPD
GHSVLSASSDGTVKVWSLKTTECVATYKPLGNELAVNTVLILPKNPEHFIVCNRSNTVVI
MNMQGQIVRSFSSGKREGGAFISATLSPRGEFIYCAGEDQVLYCFSVSSGKLERTLNVHE
KDVIGLSHHPHQNLLASYSEDGLLKLWKP
NT seq 1530 nt   +upstreamnt  +downstreamnt
atgtctatagaaatcgaatcagccgacgtgattcggcttatccagcagtacctgaaggag
tccaatcttatgaagacgctgcagaccctgcaagaggaaacgggtgtctccctaaacaca
gtggacagcgtcgatggtttcgtccaggacatctccaatggccactgggacacggtgctg
aaggtgacgcaatccctgaagctgcccgacaagaaactgctcaatctctatgagcaaatc
gtgctggagctgatagaactgcgggagctgggcgcagcccgttccctgttgcggcaaacg
gatcccatgagcatgttgaagcagcaagagcccgagcggtatattcatttagaaaacatg
ttgcagcgtgcatacttcgatccccgtgaagcgtatgcggaaggcagcagcaaggagaag
cgccgcacagccatctcacaagagctgagcggtgaggtgcatgtggtgccctcgtccagg
ctcttggccttgctgggtcaagcccttaaatggcaacagcatcagggactccttcctcct
ggtaccacgatcgatttgttccgcggcaaggcggccatgaaagatcaggaggaggaaatg
tatcccacacagctgttccggcagatcaagttcggacaaaagtcgcacgtggagtgcgct
cagttctcgccagatgggcagtacttgataaccggaagtgtcgacggattcctggaggtg
tggaacttcacgactggcaaagtgcgaaaggatttgaagtaccaggcgcaggaccagttc
atgatgatggagcaggcggttctagccctaaatttctcgcgcgattctgaaatggtggcc
tctggtgcccaggatggccagatcaaagtgtggcgcatcatcaccggccaatgcctgcga
aaatttgagaaggcccacaccaagggcattacctgcctgcagttctcccgcgataacagc
caagtgctgagtgcctcctttgactacacggtgcgactgcacggcctgaagtcaggcaag
atgctcaaagagttcaaaggccactcatcctttgtcaacgaggccacattcacgcccgac
ggccacagcgtactcagcgcttcctccgatggcacggtcaaggtgtggtccctcaaaacc
acagagtgcgtcgccacctacaaaccgctgggcaatgagctggcggtcaacactgtcctc
atcctgcccaagaatcccgagcacttcattgtctgcaacagatcgaacacggtggtaatc
atgaacatgcagggccagattgtgcgatcattctcgtcgggtaagcgcgagggtggagcc
tttatctcggctactctttcgccgcgcggcgagttcatctactgtgctggcgaggatcag
gtgctctactgtttctccgtctcctcgggtaaactggaacgtactttgaacgttcatgaa
aaagatgtcattggcctgtcccatcatccgcaccagaatcttctggccagctacagcgag
gatggactgctgaagctttggaagccatag

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