Drosophila pseudoobscura: 4801960
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Entry
4801960 CDS
T01032
Name
(RefSeq) pre-mRNA-processing factor 17
KO
K12816
pre-mRNA-processing factor 17
Organism
dpo
Drosophila pseudoobscura
Pathway
dpo03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
dpo00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
4801960
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
dpo03041
]
4801960
Spliceosome [BR:
dpo03041
]
Complex C
Other components
Step II factors
4801960
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_EML_2
WDR55
WD40_WDHD1_1st
EIF3I
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_RIG_2nd
Beta-prop_WDR90_POC16_2nd
ANAPC4_WD40
Beta-prop_EML
Beta-prop_SPT8
WD40_RFWD3
Beta-prop_TEP1_C
Beta-prop_EIPR1
Beta-prop_IFT122_1st
Beta-prop_DCAF4
WD40_MABP1-WDR62_1st
Beta-prop_WDR75_1st
WDR90_beta-prop_4th
Beta-prop_IFT140_1st
Beta-prop_SCAP
Beta-prop_Vps41
NBCH_WD40
eIF2A
PQQ_2
Beta-prop_WDR19_1st
WD_LRWD1
Beta-prop_DCAF12
Beta-prop_WDR75_2nd
Motif
Other DBs
NCBI-GeneID:
4801960
NCBI-ProteinID:
XP_001358973
UniProt:
A0A6I8UPW0
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All DBs
Position
2:16822723..16824774
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AA seq
575 aa
AA seq
DB search
MLGLQSYASSSEGDSDHEDATATAADGAAASVPAHLMPIDKTHSVSSAIAICAAPVVVPI
GASAVPRTLDPTLKEVTYNPRYDEMYAPVKGPDHPDLTMQQRAPRNTLAGYVEKAHINAF
EFENQRRTFHTYGYALDPSVDETADGQTFVGDLQSAYDDNGKTVFEAPKAKKMRKQEKND
KPDDIEGFLGPWGKYENEVSVAKPNEQERAELDELLSKRHKRGRIPEDKPLEEKATLHIK
DAYDYQGRSYLHAPHDLGVNLRSNAPPPKCFLPKAHIHTWTGHNKGISSIRWFPKTAHLL
LSGSMDCRVKLWEVYGERRCIRTFSGHRQAIKDIAWNNKGSHFLSASYDRYIKLWDAETG
DVVSRFTTRKMPFCVKFHPDNSKQHLFVAGTSDKKIICWDTRSGDIVQEYDRHLGSVSTI
TFVDDNRRFVTTSDDKSMRIWEWDIPVDMKYIADPTMHSMPAVTLAPNGKWMACQSLDNK
IVIFSALNRFKMNRKKTFTGHMVSGYACQLDFSPDMSYLVSGDGDGKCYIWDWKTTKMYK
KWQAHDGVCISALWHPHEASKVATAGWDGQIKYWD
NT seq
1728 nt
NT seq
+upstream
nt +downstream
nt
atgttgggcctgcaatcctacgccagctcctccgaaggggactccgaccatgaggacgct
accgccaccgctgccgatggggcagcagcatcagttcctgctcatttgatgcccatagac
aagacacattcggtgtcctctgccatagcgatatgtgcagcacccgttgtcgtgcccatt
ggagcgtctgcagttccgcgcaccttggatccaacactcaaggaggtaacatacaatccc
cgctacgacgaaatgtacgcgcctgtaaagggtcccgaccatccggacctgaccatgcaa
cagcgagcgccaagaaacactctggctggatacgtggaaaaggcgcacatcaatgctttt
gagtttgagaaccagcgacgcacctttcacacgtacggctatgccctggatccgagcgtg
gacgagacggccgatgggcagacgtttgtgggcgacctgcagtcggcatatgatgacaat
ggcaagacggttttcgaggcgcccaaggcaaagaaaatgcgcaaacaggagaagaacgac
aagcccgatgatatcgagggttttctgggaccctggggcaagtacgagaacgaggtaagt
gtggccaaaccgaatgaacaggaacgggctgagctggacgagctgctgtccaagcggcac
aaacgcggccgcattcccgaagacaagccgctcgaggagaaggcgacactgcacatcaag
gatgcctacgactaccagggacgctcgtatctgcatgcaccccacgatctgggtgtgaat
ctgcgttccaatgccccgccacccaagtgtttcctacccaaggcacacatacacacctgg
acggggcacaacaagggcatctcctcgatacgctggttccccaagacggcccatctcctg
ctgtccggctctatggactgtcgcgtcaagttgtgggaggtatatggcgagcgacgctgc
atacgcaccttctctggtcatcggcaggctatcaaggacattgcgtggaacaacaagggc
tcacactttctgtccgcctcatacgatcgctacataaagttgtgggatgcggaaactggc
gatgttgtttcccgcttcaccacccgcaagatgccattctgtgtcaagttccatccggat
aacagcaagcagcatctgtttgtggccggcacctccgacaagaagatcatttgctgggac
acacgcagcggggatattgtccaagaatatgaccggcatttgggctctgtcagcaccatt
acctttgtggatgacaatcgtcgatttgtgaccacctcggacgacaaatcgatgcgcatt
tgggagtgggatatacccgtggacatgaagtacattgcagacccaactatgcattccatg
ccggcggttaccttggcaccaaacggcaaatggatggcctgccaatcgctggacaacaaa
atcgtcatcttttccgctctgaatcgctttaaaatgaaccgcaagaagaccttcaccggg
cacatggtgtcgggctatgcctgccaactggacttttcgccggacatgagttacctggtg
tcgggcgatggcgatggcaagtgctacatctgggactggaagacaacgaaaatgtacaag
aaatggcaggcgcacgatggcgtctgcatcagtgctttgtggcatccgcacgaggccagc
aaagtggcgactgccggctgggatggacagatcaaatattgggactaa
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