Drosophila pseudoobscura: 4803088
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Entry
4803088 CDS
T01032
Name
(RefSeq) probable histone-binding protein Caf1
KO
K10752
histone-binding protein RBBP4
Organism
dpo
Drosophila pseudoobscura
Pathway
dpo03082
ATP-dependent chromatin remodeling
dpo03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
dpo00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
4803088
03083 Polycomb repressive complex
4803088
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
dpo03036
]
4803088
Chromosome and associated proteins [BR:
dpo03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
4803088
Histone modification proteins
HAT complexes
HATB complex
4803088
HDAC complexes
Sin3A-HDAC complex
4803088
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
4803088
PRC2.2
4803088
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
4803088
Heterochromatin formation proteins
Other heterochromatin formation proteins
4803088
Chromatin remodeling factors
NuRD complex
4803088
NuRF complex
4803088
NuRF complex (fruit fly)
4803088
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
CAF1C_H4-bd
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_CAF1B_HIR1
Beta-prop_RIG_2nd
Beta-prop_EIPR1
Beta-prop_TEP1_2nd
Beta-prop_EML_2
WDR55
EIF3I
WD40_WDHD1_1st
WD40_MABP1-WDR62_2nd
Beta-prop_WDR75_1st
Beta-prop_EML
WD_LRWD1
WD40_RFWD3
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR19_1st
ANAPC4_WD40
Beta-prop_DCAF12
Beta-prop_RIG_1st
WD40_MABP1-WDR62_1st
Beta-prop_SPT8
NBCH_WD40
MIOS_WD40
Beta-prop_IFT122_1st
Beta-prop_WDR35_TULP_N
Beta-prop_DCAF4
Motif
Other DBs
NCBI-GeneID:
4803088
NCBI-ProteinID:
XP_001359887
UniProt:
A0A6I8URR7
LinkDB
All DBs
Position
2:28765497..28767391
Genome browser
AA seq
430 aa
AA seq
DB search
MVDRSDNAAESFDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTKQ
DGKDYSVHRLILGTHTSDEQNHLLIASVQLPSEDAQFDGSHYDNEKGEFGGFGSVCGKIE
IEIKINHEGEVNRARYMPQNACVIATKTPSSDVLVFDYTKHPSKPEPSGECQPDLRLRGH
QKEGYGLSWNPNLNGYLLSASDDHTICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWH
LLHESLFGSVADDQKLMIWDTRNNNTSKPSHTVDAHTAEVNCLSFNPYSEFILATGSADK
TVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSS
EDAEDGPPELLFIHGGHTAKISDFSWNPNEPWIICSVSEDNIMQVWQMAENVYNDEEPEI
PASELETNTA
NT seq
1293 nt
NT seq
+upstream
nt +downstream
nt
atggtggatcgcagtgataatgcggcggaatctttcgacgatgccgtcgaggagcgtgtg
atcaacgaagagtacaagatatggaagaagaataccccttttctgtacgatttggtcatg
acacacgctctggaatggccatccctgactgcccagtggctgcccgatgtgaccaagcag
gacggcaaggattactcggtgcatcgcctcattttggggacacacacatcagacgaacag
aatcacttgctgatcgccagcgtccagctgcccagcgaagatgcccagtttgatggctcg
cactacgacaatgaaaaaggcgagtttggtggctttggttctgtgtgtggcaaaatagag
attgagatcaaaatcaatcacgaaggcgaggtgaaccgtgctcgttatatgccacagaac
gcttgcgttattgctaccaaaaccccgtcgagcgatgtcctggtgtttgactacacaaaa
catcccagcaaaccggagccatccggtgaatgccagccagatctgaggctgcgcggtcat
cagaaagagggctatggcctctcttggaatcctaacctgaatggttacttgctctcggcc
tctgatgatcataccatctgcttgtgggacattaacgccacgcccaaggagcatcgcgtg
atcgatgccaagaatattttcactggtcacaccgctgttgttgaggatgtggcctggcat
ctgctgcacgagtcgcttttcggttctgtggccgacgatcagaagctcatgatctgggac
acgcgcaacaacaacacctcaaagccgtcgcataccgtcgatgcccatacggccgaagtc
aattgtctgagcttcaatccctattcggagttcatcttggccacgggctccgctgacaag
actgtggcactgtgggatttgcgtaatctgaagcttaaactacattccttcgagtcgcac
aaggacgagatcttccaggtgcagtggtcgccccataacgagaccattcttgcctcttcc
ggcaccgatcgtcgcttgcacgtttgggatttgtcgaaaataggcgaggagcagagctca
gaggatgctgaagatggaccaccagagctgctcttcattcacggcggccacacggccaag
atcagcgacttctcatggaaccccaacgagccctggatcatttgctccgtgtccgaggac
aacataatgcaggtgtggcaaatggcagagaacgtatacaacgacgaggagcccgagata
ccggcttccgagttggaaacaaacaccgcttaa
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