Drosophila pseudoobscura: 4803376
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Entry
4803376 CDS
T01032
Name
(RefSeq) pre-mRNA-processing-splicing factor 8
KO
K12856
pre-mRNA-processing factor 8
Organism
dpo
Drosophila pseudoobscura
Pathway
dpo03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
dpo00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
4803376
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
dpo03041
]
4803376
Spliceosome [BR:
dpo03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
4803376
Complex C
U5 SnRNP specific factors
4803376
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PROCN
PRP8_domainIV
U6-snRNA_bdg
PRO8NT
U5_2-snRNA_bdg
PROCT
RRM_4
JAB
Motif
Other DBs
NCBI-GeneID:
4803376
NCBI-ProteinID:
XP_001360095
UniProt:
A0A6I8UST9
LinkDB
All DBs
Position
3:complement(4038628..4047725)
Genome browser
AA seq
2397 aa
AA seq
DB search
MSIPPYMIPQNAWAAQLMAQQAYAAAHAQQAQLHAQQQMANQIQQIPPPGAPLPPASGHS
NGIPIPAAGQGQSGLGQIPTPKPDILTEDKLQEKALKWQNLQSKRFAEKRKFGFVDTQKE
DMPPEHIRKIIRDHGDMTSRKYRHDKRVYLGALKYMPHAVLKLLENMPMPWEQIRDVQVL
YHITGAITFVNEIPWVIEPVYIAQWGTMWIMMRREKRDRRHFKRMRFPPFDDEEPPLDYA
DNVLDVEPLEAIQIELDNDEDNAVYKWFYDHRPLVDTPYVNGSTYRKWNLSLPQLATLYR
LANQLLTDLVDNNFFYLFDPKSFFTAKALNMAIPGGPKFEPLIKDNNVGDEDWNEFNDIN
KVIIRQPIRTEYRIAFPYLYNNMPHFVHLSWYHTPNVVYIKTEDPDLPAFYFDPLINPIS
HRNVNSKLQEPLPDDDEDFTLPDEVQPFLQDTPLYTDNTANGIALLWAPRPFNMRSGRSR
RAIDVPLVKCWYKEHCPPGHPVKVRVSYQKLLKYYVLNALKHRKPKPQKKRYLFRSFKAT
KFFQTTTLDWVEAGLQVCRQGYNMLNLLIHRKNLNYLHLDYNFNLKPVKTLTTKERKKSR
FGNAFHLCREILRLTKLIIDSHVQYRLNNVDAFQLSDGLQYIFAHVGQLTGMYRYKYKLM
RQIRMCKDLKHLIYYRFNTGPVGKGPGCGFWAPGWRVWLFFMRGITPLLERWLGNLLSRQ
FEGRHSKGVAKTVTKQRVESHFDLELRASVMHDIVDMMPEGIKQNKARTILQHLSEAWRC
WKANIPWKVPGLPIPIENMILRYVKMKADWWTNTAHYNRERIRRGATVDKTVCKKNLGRL
TRLYLKAEQERQHNYLKDGPYISPEEAVAIYTTTVHWLESRRFAPIPFPPLSYKHDTKLL
ILALERLKEAYSVKSRLNQSQREELGLIEQAYDNPHEALSRIKRHLLTQRAFKEVGIEFM
DLYSHLIPVYEVEPLEKITDAYLDQYLWYEADKRRLFPPWIKPSDTEPPPLLAYKWCQGI
NNLQEVWDVGEGECNVLLESRFEKLYEKIDLTLLNRLLRLIVDHNIADYMTAKNNVVINY
KDMNHTNSYGIIRGLQFSSFITQYYGLVLDLLVLGLHRSSEMAGPPQMPNDFLTFQDAVT
ETAHPIRLYCRYVDRIHLFFRFSAEEARDLIQRYLTEHPDPNNENIVGYNNKKCWPRDAR
MRLMKHDVNLGRAVFWDIKNRLPRSVTTIGWESTFVSVYSKDNPNLLFNMSGFECRILPK
CRTQNEEFTHRDGVWNLQNEITKERTAQCFLRVDDESLGRFHNRVRQILMASGSTTFTKI
VNKWNTALIGLMTYFREAVVNTQELLDLLVKCENKIQTRIKIGLNSKMPSRFPPVVFYTP
KELGGLGMLSMGHVLIPQSDLRWSKQTDVGITHFRSGMSHDEDQLIPNLYRYIQPWESEF
IDSQRVWAEYALKRQEANAQNRRLTLEDLEDSWDRGIPRINTLFQKDRHTLAYDKGWRIR
TEFKQYQVLKQNPFWWTHQRHDGKLWNLNNYRTDMIQALGGVEGILEHTLFKGTYFPTWE
GLFWEKASGFEESMKYKKLTNAQRSGLNQIPNRRFTLWWSPTINRANVYVGFQVQLDLTG
IFMHGKIPTLKISLIQIFRAHLWQKIHESIVMDLCQVFDQELDALEIETVQKETIHPRKS
YKMNSSCADILLFPAYKWNVSRPSLLADTKDTMDNTTTQKYWLDIQLRWGDYDSHDVERY
ARAKFLDYTTDNMSIYPSPTGILIAIDLAYNLHSAYGNWFPGCKTLIQQAMAKIMKANPA
LYVLRERIRKALQLYSSEPTEPYLSSQNYGELFSNQIIWFVDDTNVYRVTIHKTFEGNLT
TKPINGAIFIFNPRTGQLFLKIIHTSVWAGQKRLGQLAKWKTAEEVAALIRSLPVEEQPK
QIIVTRKGMLDPLEVHLLDFPNIVIKGSELQLPFQACLKVEKFGDLILKATEPQMVLFNL
YDDWLKTISSYTAFSRLILILRALHVNTERTKIILKPDKTTITEAHHIWPTLTDEEWIKV
EVQLKDLILADYGKKNNVNVASLTQSEIRDIILGMEISAPSAQRQQIAEIEKQTKEQNQL
TATTTRTTNKHGDEIITSTTSNYETQTFSSKTEWRVRAISATNLHLRTNHIYVSSDDIKE
TGYTYILPKNILKKFVTISDLRAQIAGYLYGVSPPDNPQVKEIRCIVMPPQWGTHQTINL
PNTLPTHQYLKDMEPLGWIHTQPNELPQLSPQDITTHAKIMQENSNWDGEKTIVITCSFT
PGSCSLTAYKLTPSGFEWGSKNTDKGNNPKGYLPSHYERVQMLLSNKFLGFFMVPAQSSW
NYNFMGVRHDPNMKYELQLANPKEFYHELHRTSHFLLFSNLEDGGDGAGADREDVYA
NT seq
7194 nt
NT seq
+upstream
nt +downstream
nt
atgtccattccgccgtacatgataccacaaaatgcatgggccgctcaattgatggcccag
caggcatacgcggctgcacacgcacagcaggcacaattgcatgcgcagcagcagatggcc
aaccagatacaacaaataccaccaccaggagcacccttaccgccagccagcggccattct
aatggcataccaattccggccgcaggccaggggcagtctgggctggggcaaattcccacg
ccaaagccggacatacttacggaggataaactgcaggagaaggcgctaaagtggcaaaat
ctgcagtccaagcgtttcgctgagaagcgaaagttcggcttcgtcgacacacagaaggaa
gacatgccgccggagcatataagaaaaattatacgcgatcatggtgacatgacctcgcgc
aagtatcgccatgacaagcgggtttatttgggcgctctgaagtacatgccacatgcagtg
ctgaagctgctggaaaatatgcccatgccatgggagcagatccgggacgtacaggtgctg
taccatatcactggtgccataacctttgttaacgaaataccatgggttattgagccggtt
tacattgctcagtggggaacaatgtggataatgatgcgtcgcgagaagcgtgatcgtcgc
cacttcaagcgtatgcgatttccgccgtttgacgatgaagaaccaccgctggactatgcg
gacaacgtactggatgtggagccattggaagccattcaaattgagctcgataatgatgaa
gacaatgccgtgtacaaatggttctacgaccatcgtcccctcgtagacacgccctatgtg
aatgggtctacctaccgcaagtggaatctgtccctgcctcaattggctactctttatcgc
ctggcgaaccagttgctcacggacctggtcgataacaacttcttttacctatttgacccg
aagagtttctttaccgcgaaggctctgaacatggctataccgggcgggcccaaattcgag
ccactcatcaaggataataatgttggcgatgaggactggaacgagttcaacgacataaat
aaggtgatcatccgccaaccaattcgcacggagtatcgtattgcttttccctacctgtac
aacaatatgccgcactttgtgcatctaagctggtatcacacacccaacgtggtctacatc
aagactgaagatcccgatttgcctgcgttttactttgatccgctcatcaatcccatttcg
catcgcaatgtaaattccaagctgcaggaacccctgcctgatgacgatgaggactttacg
ctcccggatgaagtgcagccgttcctgcaggacacgccgctttacaccgacaacaccgcc
aatggaattgctttgctatgggctccgcgccctttcaacatgcgttccggtcgctcccgt
cgagccattgatgtgccgttggtcaagtgctggtacaaggagcactgtccacctggccat
ccggtaaaagtgcgcgtcagctatcagaaattgctgaaatattatgtactaaatgctctg
aagcaccgaaagcccaagccgcaaaagaaacgatacctgttccggtccttcaaggccaca
aagttcttccagaccaccacgttggattgggttgaggctggattgcaggtgtgccgtcag
ggatacaacatgctaaatctcttgattcatcgcaaaaatcttaactatttgcatctggac
tataatttcaacttgaagccggtcaagacattgactaccaaagagcgcaaaaagtcacgt
ttcggcaacgcgtttcatttgtgccgagagatcctgcgtctgaccaagctcatcatcgac
tcccacgtgcagtatcgcttgaataatgtggatgctttccagctatccgatggcctgcag
tacatattcgcgcatgtcggtcagctcactggcatgtatcgttataagtacaagctgatg
aggcagataagaatgtgcaaggatctgaagcatttgatctactaccgctttaatacggga
cccgtgggcaagggacccggttgtggtttctgggcacccggatggcgggtgtggctgttc
tttatgcgcggcatcactcccctgctggaacgttggctgggaaatctgctgtctcgtcag
ttcgaaggacgccactccaagggcgtagccaaaaccgtgaccaagcagcgcgtcgagtcg
cacttcgatctggagctgcgagcctctgttatgcacgacatcgtggacatgatgcctgag
ggcattaagcaaaacaaggctcgcaccattctgcagcatctgtcggaggcttggcgctgc
tggaaagccaacattccgtggaaggtacccggcctccccatacccatcgagaatatgatc
ctccgctatgtgaaaatgaaggcggactggtggacaaacacggcccactacaaccgagag
cgcatccgacgaggtgctaccgtggataagaccgtatgtaagaagaatctgggccgcctc
actcgtctctacctgaaggcggagcaggaaagacaacacaactacctcaaggatggtcca
tacatatcgccagaggaggcggtggccatctacaccaccacagtgcactggctggagtca
cgtcgctttgcgcccatcccattccctccgctgtcctacaagcacgacacaaaattgctg
atccttgcactcgagcgactaaaggaggcctacagcgtgaagtcgcgcttgaatcaaagc
cagcgtgaggagcttggtctcatcgaacaagcctacgataatcctcacgaggcattgtct
cgtatcaagcgccatctgctgacgcagcgggctttcaaagaggtggggattgagttcatg
gacctgtacagccatctgatacccgtgtatgaggtggaaccgctggagaagatcacggac
gcatatctcgaccagtacctctggtacgaggcagacaagcggaggctgtttcccccctgg
atcaagcccagcgacacagagcctccgccgctcctggcctataagtggtgtcaaggcatc
aacaatcttcaggaggtctgggatgtgggcgagggcgaatgcaatgtgctgctggagtcg
cgctttgagaagctatacgagaagattgacttgaccctgcttaaccgtcttctgcgcctg
atcgtggaccataatatcgccgattatatgacggcgaagaacaatgttgtgatcaactac
aaggacatgaaccacaccaacagttatggcatcatccgtggcctgcagttctcctcgttc
ataacgcaatactatggcttggttctggacctcctggtgctgggcctgcatcgatccagc
gagatggccggccctccgcaaatgcccaatgattttcttacctttcaggacgcagtcacg
gagacggcacatcctattcggctgtattgtcgctacgtcgatcgcatacacttgtttttc
agattctcggcggaggaggcgcgagacctcatccagcggtatctcaccgagcatcccgat
cccaacaatgaaaacattgtcggctacaacaacaagaaatgctggccccgcgatgctcgt
atgcgtttaatgaaacacgacgtcaatctaggccgcgccgtcttctgggacattaagaac
cgcttgccgcgctctgttaccaccattggctgggaaagcacctttgtttcggtctattcc
aaggacaatccgaacttgctgttcaacatgagcggctttgagtgtcgaatcttgccaaag
tgtcgcacccaaaacgaagagttcacacatcgcgatggcgtgtggaatctgcagaacgaa
ataaccaaggagcgcacagctcaatgcttcctgcgtgtggacgatgaatcgctgggacgc
ttccacaatcgggtgcgtcagatcttgatggcttccggttccaccacgtttacaaagatt
gttaacaaatggaacacggccctcattggcctgatgacgtacttccgcgaggctgttgtc
aatacccaggagttgctggatctactggtcaagtgtgaaaacaagattcagacgcgcatc
aagattggccttaactcgaaaatgccctcgcgctttccacccgtcgtgttctacactcca
aaggagctgggaggtctcggcatgttgagcatgggccacgttctcattccgcaatccgat
ctgcgctggtccaagcagacggatgtgggaataacccacttccgatcgggcatgtcccat
gacgaggatcagcttattccgaatctgtatcggtacattcagccgtgggagagtgagttt
atcgattcgcagcgcgtctgggcggagtatgcgctgaagcgccaggaggcaaatgctcag
aaccgtcgcctcacgctggaggacctcgaggacagctgggatcggggtattcctcggatc
aacacgcttttccagaaggaccgccacactctggcctatgacaagggctggcgcatacgc
accgagttcaagcagtaccaggtgctgaagcaaaaccccttctggtggacccatcaacgc
cacgacggcaagttgtggaacctgaacaactatcgcacggatatgatccaagcgctgggc
ggcgtggagggaattctcgagcacactctgttcaagggcacctatttccccacctgggag
ggtctgttctgggagaaggcctctggcttcgaggagtccatgaagtacaagaaactgacc
aatgcacagcgctctggtctgaatcagatcccgaatcgtcgcttcacactctggtggtcc
ccgacgatcaaccgcgccaatgtctatgtgggcttccaggtgcagttggatctgactggc
atattcatgcatggcaaaattccgacgctcaagatttcgctgattcaaattttccgtgcc
catttgtggcagaagatacacgagtccattgtaatggacttgtgccaggtgtttgatcag
gagctggacgctcttgaaatcgaaacggtgcagaaggagacgatccatccgcgtaagtcc
tacaagatgaactcctcctgtgccgacattttactcttccccgcctacaagtggaacgtg
tcgcgaccctctctgctggccgacaccaaggacaccatggacaacacgaccactcagaag
tattggctagacattcagctgcgctggggagactatgattcccacgatgtggagcgttac
gcgagggccaagttccttgattacaccacagacaacatgtccatttatccctcgcccacg
ggtatcctgattgccatcgatctggcctacaatctgcactcagcatatggaaattggttc
cctggctgcaagactctcatccagcaggccatggccaaaatcatgaaggccaatccggcc
ctctatgtcctgcgcgagcgcatccgcaaggctctgcagctgtactcctcagagccaacg
gaaccctacttgagctcacagaactatggcgaacttttctcaaatcagatcatctggttt
gtcgacgacaccaacgtgtaccgcgtcaccatccataagacattcgagggcaatctgaca
acgaagccgataaacggcgcaatctttatattcaatccccggacgggccagcttttccta
aagattatccacacttcggtatgggcggggcagaaacgtttgggtcagttggccaagtgg
aagacggctgaagaggtggctgccctgattcgctcgctgcccgtggaggagcagccgaaa
cagatcattgtgacgcgcaagggtatgcttgatcctctcgaggttcatttgctcgacttt
cccaacatcgttatcaaaggctctgagctgcagttgcccttccaggcctgcttgaaagtg
gagaagtttggtgatctgattctgaaggccaccgagccccaaatggtgctctttaatctt
tacgacgactggctgaagacaatttcctcgtacacggcgttcagccgtctcattttgatc
ctacgagccctgcatgtgaatacggagcgcaccaagatcatcctaaagccagacaagacc
actattaccgaggcccatcatatctggccaacattgacggatgaggagtggatcaaggtg
gaggtgcagctcaaggatctcattttagccgactacggaaagaagaacaacgtgaacgtg
gcctcactcacacagtcggagatccgcgacattattctcggcatggagatcagtgcgcca
tcggcgcaacgtcagcagatagcagagatcgagaagcagacaaaggagcagaatcaactg
acggcgaccaccacgcgcaccacaaacaaacacggcgacgagatcatcacttccaccaca
tccaattacgagacgcagactttcagctcgaagactgagtggcgcgtgcgagccatctct
gccacgaatctgcatttgcgaacgaatcacatatatgtcagctccgatgacatcaaggaa
actggctatacttacattctgcccaagaacatactgaagaagttcgtcaccatctccgat
ttgagagcacagattgcgggatatctttacggcgtaagtccgccggacaacccgcaggtg
aaggagattcgctgcattgtgatgcctccacaatggggaacgcaccagacaattaacctt
cccaacaccctgcccacccatcagtaccttaaggacatggaaccgttgggctggatccac
acgcagcccaacgagttgccgcagctatcgccgcaggatatcacgacccatgccaagata
atgcaggagaactccaactgggacggcgaaaagacgattgtaattacctgctccttcact
cccggctcttgctcgctgaccgcttacaaactgaccccgtcgggcttcgagtggggctct
aagaacacggacaagggaaacaaccccaagggctacctgccttctcactacgaaagagtt
cagatgctgctgtcgaacaagttccttggcttcttcatggtgcccgcgcagagcagctgg
aactacaatttcatgggagtgcggcacgatcccaacatgaagtacgaactgcagctggcc
aacccaaaggagttctaccacgaactgcaccgcacgtcgcacttcctgcttttctcgaac
ctcgaggatggtggcgatggcgccggcgcggatcgtgaggatgtctatgcgtag
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integrated database retrieval system
