Drosophila pseudoobscura: 4803493
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Entry
4803493 CDS
T01032
Name
(RefSeq) putative pre-mRNA-splicing factor ATP-dependent RNA helicase PRP1 isoform X2
KO
K12820
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:
5.6.2.6
]
Organism
dpo
Drosophila pseudoobscura
Pathway
dpo03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
dpo00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
4803493
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
dpo03041
]
4803493
03009 Ribosome biogenesis [BR:
dpo03009
]
4803493
Enzymes [BR:
dpo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
4803493
Spliceosome [BR:
dpo03041
]
Complex A
U2 snRNP components
U2 related factors
4803493
Complex B
4803493
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
4803493
Ribosome biogenesis [BR:
dpo03009
]
Eukaryotic type
90S particles
Helicases
4803493
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
HA2_N
Helicase_C
DEAD
AAA_22
AAA_19
nSTAND3
Flavi_DEAD
SRP54
ResIII
ABC_tran
AAA_30
T2SSE
AAA_25
AAA_7
ATPase
TsaE
PhoH
Motif
Other DBs
NCBI-GeneID:
4803493
NCBI-ProteinID:
XP_001360210
UniProt:
A0A6I8UST7
LinkDB
All DBs
Position
3:5185599..5189068
Genome browser
AA seq
736 aa
AA seq
DB search
MSKRRIEVGETYVSKSKKVADASSTSASASASSVAAAAGTVAQILGGFVPSKQPPTTNAL
TGKTYSQRFQNLYKKRIALPVFEYQADFMRLLSQHQCIVLVGETGSGKTTQIPQWCVDFA
VSKGRKGVSCTQPRRVAAMSVAQRVSEEMDVNLGEEVGYSIRFEDCSSAKTLLKYMTDGM
LLREAMSDPMLEQYQVILLDEAHERTLATDILMGVLKEVIRQRNDLKLIVMSATLDAGKF
QQYFDNAPLMNVPGRTHPVEIFYTPEPERDYLEAAIRTVIQIHMCEEIEGDILMFLTGQE
EIEEACKRIKREIDNLGSEIGELKCIPLYSTLPPNLQQRIFEAAPPPNANGAIGRKVVVS
TNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKASAQQRAGRAGRTRPGK
CFRLYTEKAFKNEMQDNTYPEILRSNLGTVVLQLKKLGIDDLVHFDFMDPPAPETLMRAL
ELLNYLAALDDDGNLTDLGAVMSEFPLDPQLAKMLIASCQHNCSNEILSITAMLSVPQCF
VRPNEAKKAADEAKMRFAHIDGDHLTLLNVYHAFKQSSEDPNWCYENFINFRSLKSADNV
RQQLARIMDRFNLRRTSTEFTSKDYYVNIRKALVQGFFMQVAHLERTGHYLTIKDNQNVQ
LHPSTCLDHKPDWVIYNEFVLTTKNYIRTVTDVKPEWLISLAPQYYDLNNFPQCEAKRQL
ELLQQRMETKQYQKGF
NT seq
2211 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaagcgccgcattgaagtcggtgagacatacgttagcaagtccaagaaggttgcg
gatgcgtcgtccacttcggcatcggcatcggcatcgtcggtggcagcggctgccggcact
gttgcacagatcctgggcggatttgtgcccagcaagcagccacctacgacgaatgccctg
actgggaagacttactcgcagcgtttccagaacctgtacaagaagcgaatcgcgttgccg
gtatttgagtaccaggcggacttcatgcgcctgctgagccagcaccagtgcattgtgctg
gtgggcgagacaggctcgggcaagaccacccagataccacaatggtgtgtggactttgcc
gtgtccaaaggaagaaagggtgtctcgtgtacgcagccccgtcgtgtggccgctatgtct
gtggcccagcgcgtgtccgaggaaatggatgtgaatctgggcgaggaggttggctactcc
attcgttttgaggactgctcttcggccaagaccctgctgaagtacatgacggacggtatg
ctgctccgcgaggctatgtccgaccccatgctggagcagtaccaggtgatcctgctcgac
gaggctcacgagcgcaccctcgcaactgacatcctgatgggcgtgctcaaggaggtcatc
cgacagcgcaatgatcttaagctgattgtcatgtcggccactctcgatgctggcaagttc
cagcagtacttcgacaacgctcctctaatgaacgtgcccggtcgcacgcatcccgtggag
atattctatacgccggagccggagagggactacttggaggcagccattcgcacagtcatc
cagatacatatgtgcgaggagattgagggtgacattctcatgttcctcacgggtcaggag
gagattgaggaggcctgcaagcgcatcaaacgggaaatcgacaacctgggctcagagatt
ggcgagctgaagtgcattcccctgtactctacgctgccgcccaatctgcagcagcgcatc
ttcgaggcggcgcccccgccgaatgccaacggagccattggccgcaaagttgtggtgtcc
accaacattgcggaaacctcgctgacaatcgatggtgtggtatttgtgattgacccgggc
tttgcgaaacagaaggtctacaatcctcgcatccgcgttgagagcttactggtctcgccc
atttccaaggcttcggcccagcagcgggctggtcgagccggtcgtactcgtcccggcaag
tgcttccgactttacacggagaaggccttcaagaacgagatgcaagacaacacctatccc
gagattctcaggtccaatttgggcactgtggttctccagcttaaaaagctaggcatcgac
gacttggtgcactttgactttatggatccccctgcaccggagacccttatgcgagcgctg
gagctgctcaactatctggccgccctggacgacgatggcaacctgacagacttgggggca
gtcatgtccgagttccccctggatccgcagctcgccaagatgctgatagccagctgccag
cacaactgctccaacgagatactttccataacggccatgctgtcggtgccacaatgtttc
gtgcgtcccaatgaggccaagaaggcggccgacgaggccaagatgcggttcgcacacatc
gatggggatcatttaacgttgctgaatgtctaccatgccttcaaacagagcagtgaggac
cccaactggtgctatgaaaacttcataaacttccggtcgctgaagagcgctgacaacgtg
cgccagcagctggcccggattatggatcgcttcaacttgaggcgcaccagcacggagttc
acctcaaaggactactatgtgaacatacgcaaggccctcgtccagggcttcttcatgcag
gtggcccacctggagcgcaccggtcactatctgactatcaaggataaccagaatgtgcag
ctgcacccctcgacctgtctggaccacaagcccgattgggtcatctacaatgagtttgtg
ctaaccaccaagaactacatacgcacggtcacagatgtaaagcctgaatggctgatcagc
ctggccccgcaatactacgacctgaacaacttccctcaatgcgaggcgaagcgtcagttg
gagttgctgcagcagcgaatggaaaccaagcagtaccagaagggattttaa
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integrated database retrieval system
