Drosophila pseudoobscura: 4803501
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Entry
4803501 CDS
T01032
Name
(RefSeq) transcription elongation factor SPT5
KO
K15172
transcription elongation factor SPT5
Organism
dpo
Drosophila pseudoobscura
Pathway
dpo03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
dpo00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
4803501
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dpo03021
]
4803501
03019 Messenger RNA biogenesis [BR:
dpo03019
]
4803501
Transcription machinery [BR:
dpo03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
4803501
RNA polymerase I system
4803501
Messenger RNA biogenesis [BR:
dpo03019
]
Eukaryotic type
mRNA processing factors
3' end processing
DRB sensitivity inducing factor (DSIF) complex
4803501
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KOW4_SPT5
KOW
Spt5-NGN
KOW6_SPT5
KOW5_SPT5
KOWx_SPT5
KOW2_Spt5
Spt5_N
KOW7_SPT5
KOW1_SPT5
CTD
GPKOW_C
DUF3912
Motif
Other DBs
NCBI-GeneID:
4803501
NCBI-ProteinID:
XP_001360216
UniProt:
A0A6I8USU2
LinkDB
All DBs
Position
3:complement(5297044..5301450)
Genome browser
AA seq
1080 aa
AA seq
DB search
MSDSEVSNMSDSGSEDGSISNKSQRSVRSKSGQRSRSRSRSMSRSSRSRSRSRSAHSGSG
SDSPQGRGNRPKSDESGEEEEEPPGEDIDSEEYEEEENDDHPRKKKKKERFGGFIIDEAE
VDDEVDEDDEWEEGANEIGIVGNEIDELGPTARDIEIRRRGTNLWDTQKEDEIEEYLRKK
YADESIAKRHFGDGGEEMSDEITQQTLLPGIKDPNLWMVKCRIGEEKATALLLMRKFLTY
LNTDDPIQIKSIIAPEGVKGYIYLEAYKQTHVKTAIDNVGNLRMGKWKQEMVPIKEMTDV
LKVVKEQVGLKVKQWVRLKRGLYKDDIAQVDYVDLAQNQVHLKLLPRIDYTRMRGALRTT
ATETDDGKRKKKRRPVAKPFDPEAVRAIGGEVHSDGDFLLFEGNRYSRKGFLYKNFTMSA
ILSDGVKPTLAELERFEESPEEVNLELLGNVKDDPTSTHSFSMGDNVEVCVGDLENLQAK
IVAIDGTMITVMPKHQDLKDPLIFKASELRKYFKTGDHARVLAGRYEGETGLIIRVEPLR
VVLVSDLTNHELEVLPRDLQLCSDVATGVDCLGQFQWGDLVQLDSQNVGVIVRLERENFH
VLGMNGKCIECKPTALHKRRENRNTVALDADQNQIRRRDIVKVMEGPHAGRSGEIKHLYR
SLAFLHCRMYTENGGIFVCKTRHLQLAGGSKTNVNPAGSMGGLGFMSPRIQSPMHPSGGR
GGARGGARGGRGGFRVTRDREILGKTIKISGGPYKGAVGIVKDATEATARVELHTSCQTI
SVDRNHIAIVGVPGKEGSVSTYGRTPARTPGYGAQTPSYTAAGSKTPLVGSQTPNWDTDT
RTPYGTMTPSHDGSMTPRHGAWDPTANTTPARNNDFDYSLEEPSPSPGYNPSTPGYQMTS
QFAPQTPGTLYGSDRSYSPFNPSPSPAPSPYPVGYLNTPSPSTYSPNTPGGIPQSPYNPQ
TPGASLDSSMGDWCTTDIEVRIHTHDDTDLVGQTGIIRTVSNGVCSVFLRQEDRSVSIVS
EHLAPVPPNSGDEFKVIYGEERESVGRVLSKQEGDVLVCKINDEVKMIPVNHLCKMKSID
NT seq
3243 nt
NT seq
+upstream
nt +downstream
nt
atgtcagactccgaagtcagcaatatgtcggacagtggttcagaagatggatcgatttca
aataagtcgcagcgcagcgtcagatccaagtctggccagcgttcgaggtccaggtcaagg
tctatgtccagatcctcccgctcaagatcccgatctcggtcggctcattcgggctctggg
tccgactcccctcagggtcgtggaaaccggccgaaaagcgacgaatcgggggaggaagag
gaggagccgcctggagaagatattgactccgaggaatacgaagaagaagagaatgacgat
catccacgaaagaaaaagaaaaaggaacgttttggtggcttcatcatagacgaggcggag
gtggacgacgaggtcgacgaggatgacgaatgggaggaaggtgccaatgagataggaatt
gttggaaacgagattgatgaactcggtccaacggccagggacatcgaaataaggaggcga
ggtacaaatctatgggacactcaaaaggaagatgagatcgaagagtacctgagaaaaaaa
tatgctgacgaatccattgcaaaacgacactttggcgatggcggggaagagatgtcggat
gagatcacccagcagaccctactgcctggcattaaggatcccaatttatggatggttaag
tgccgcattggagaggagaaggccaccgccttactgttgatgcgaaagttcttaacatac
ctaaatacggatgacccaatccagatcaaatcgattattgctcccgagggcgttaaggga
tacatttatctagaagcctataagcagacccacgtcaaaaccgcaatcgataatgtggga
aatcttcggatgggcaaatggaaacaagagatggtgcccatcaaggaaatgacggatgtt
ttaaaggtggtcaaggaacaggtcggcctcaaggtcaagcagtgggtgcgcctaaagcga
ggactctacaaggacgatattgcgcaggtggactacgtcgatctggcccaaaatcaagtt
catctaaaactcctaccccgcatcgactatacaagaatgcgtggtgccttgaggacaaca
gcaacagaaactgacgatggcaagcgcaagaagaaacgccggcctgtagcaaaaccgttt
gatccagaagccgtgagggcaattggtggtgaggtacactcagatggcgattttctacta
tttgagggtaatcggtattcgcgaaagggctttctctacaagaacttcaccatgtcagcc
attctatcagacggcgtaaagcccaccttagccgagctagagcgcttcgaagaatctcca
gaagaggtgaatctggaacttttgggcaatgtcaaggatgaccccacttcgactcactcg
ttctccatgggggacaatgttgaggtctgcgtgggagacttggagaacttgcaggcgaag
attgtggccattgacggcaccatgatcacggttatgcccaagcatcaggatctaaaggat
cctttaatttttaaagcgagtgagctgcgcaagtattttaaaactggagaccatgccagg
gtgttggcaggtcgatatgagggcgaaactggacttattatccgtgtagagcccttgcga
gtggtgctcgtctctgatttgaccaatcacgaattggaggttttgccacgggatctgcag
ctctgctctgatgtggctacaggcgttgactgtctgggccagttccaatggggcgatttg
gtgcaacttgactctcagaatgtgggtgttattgtgcgtttggagcgtgagaactttcat
gtactgggcatgaatggaaagtgcattgaatgcaagccaaccgctttgcataagcgacga
gagaaccgcaatactgtggccctggatgctgaccaaaatcagattcgccgtcgcgacatt
gttaaggttatggagggtcctcatgctggacgttccggagaaatcaagcacttgtatcgc
agcttggcgttccttcattgccgcatgtatacagaaaacggaggcatatttgtgtgcaag
acacggcacttgcagttggctggaggcagcaagaccaacgtaaatcctgctggttcgatg
ggcggacttggattcatgtcaccgcgtattcaatcgcccatgcatccgtctggcggacga
ggaggagcccgcggaggggcgcgcggcggtagaggtggtttccgcgtgactcgtgatcgc
gaaattctgggtaaaaccatcaagattagtggcggaccctataaaggtgctgtgggaatt
gttaaggacgcaactgaggccacagctcgtgtggagctccatacttcatgtcaaacgata
tcggtcgatcgcaatcatattgccatcgttggggttcccggcaaagagggaagcgtctcc
acatatgggcgcacgccagctcgtacgcccggctacggggcacaaacgccaagctacact
gcggcaggatctaagacccccttggtcggaagtcaaacgccgaactgggacacagatact
cgtactccttatggcactatgacaccgtcgcacgatggcagcatgacgccacgccatggt
gcttgggatccgacagcaaacacaacaccggcgcgaaacaacgatttcgattattcgctg
gaggagcccagcccaagccccggctacaatccaagtactcccggctatcagatgacatct
cagttcgccccccaaactcctggtactttatacggatcggatagaagctacagcccattc
aatccaagtcccagtcctgcgccttcgccttatccagttggctacttgaataccccatcg
ccatcgacctattcaccaaacactcccggtggtataccacaatctccgtacaatccccag
acaccgggggccagcctggactcgtcgatgggcgactggtgcacaaccgatattgaagtt
cggattcatacgcacgacgacaccgatcttgttggacaaacaggtattatccgcactgtt
tccaatggtgtgtgctctgtattcttacgccaggaagaccgcagcgtctccattgtcagc
gagcacttggcacctgtgccgcccaacagtggcgatgagttcaaggtgatctatggcgag
gaacgggagtcggttggccgggtactgtccaagcaggaaggcgacgtgctcgtctgcaag
ataaacgacgaggtcaagatgataccagttaatcatctctgcaagatgaaatccattgat
taa
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integrated database retrieval system
