Drosophila pseudoobscura: 4803536
Help
Entry
4803536 CDS
T01032
Name
(RefSeq) probable nucleoporin Nup54
KO
K14308
nuclear pore complex protein Nup54
Organism
dpo
Drosophila pseudoobscura
Pathway
dpo03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
dpo00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
4803536
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dpo03019
]
4803536
Messenger RNA biogenesis [BR:
dpo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
4803536
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup54
Nup54_C
Motif
Other DBs
NCBI-GeneID:
4803536
NCBI-ProteinID:
XP_001360246
UniProt:
A0A6I8USJ1
LinkDB
All DBs
Position
3:complement(5494069..5496678)
Genome browser
AA seq
593 aa
AA seq
DB search
MSFFGSSTPLGASTPAKTGGMFGSPFGSTPGAGQAVSAFGSPASAAPAFGTATATPAFGG
GTAFGTPTAGQGFGAPTAAQGFGGAQTTPATTGLGGGFGGFGAAPAAGQGGLFAAPATNT
AFSGFGQQAATSTAPASGFAGFGATTTTAPAFGGFGTGQTTGFGGSVFGSNFGKPSNTTV
TPGFGGFGGTSFMLGQPQQQPAPISADEAFAQSILNVSIFGDERDSIVAKWNYLQSMWGT
GKLFYSQSAPPVDITPENYLCRFKAIGYSRMPGKDNKLGLVALNFDRDLSAIKPHQQQVI
QTLHSLFGGKPNMMVHVETIKELENKKCQMVIYVDEKLQHAPNEGKRILATELSNYLNQA
SLKPQLTNLGIVESLALVLPDEDQLKEYLENPPRGVDPRMWRQANLDNPDAGKFLPVPMI
GFNDLKWRVKCQEQETDTHALYMKKVEGELTELRHRHCMASAKILEHKRKLAELSHRILR
IIVKQECTRKVGSSLTPEEEALRTKLQSMQAVVSAPTQFKGRLSELLSQMRMQRNQFAGN
GGCEYTMDPEAEDEMKNFLTMQQRAMEVLSETVNKDLKALDVIVKGLPELKQA
NT seq
1782 nt
NT seq
+upstream
nt +downstream
nt
atgtccttttttggatcgagtacaccgctgggagcgagcacgccggccaaaactggcggc
atgttcggttcaccatttggatcgacgcccggagctggtcaagcagtgtctgcgttcggc
tccccggcgtcagctgctccagcatttggaaccgcaacagcgacgcctgcttttggaggc
ggaactgctttcggcactcccacggctgggcaaggctttggagctcctactgcagcgcaa
ggttttggcggtgcccagacaacaccagccacaacaggacttggtggtggttttggtgga
ttcggtgctgccccggcagcaggtcagggaggtttgtttgccgctccagcgacaaataca
gcttttagtggatttggtcagcaggccgctaccagcacagcgccagcgagtggatttgca
ggctttggggcaacaacgaccacggctccagctttcggtggctttgggactggtcagacg
acgggatttggcggcagcgtgtttggctccaacttcggaaagccgtcgaataccacagtt
actcctggctttggtggattcggtggtaccagttttatgctgggccagcctcaacagcag
ccagcacccatatcagccgatgaggcgtttgctcaatccattctgaatgtctcaatattt
ggcgatgagcgtgacagcattgtggccaaatggaactaccttcagtccatgtggggtact
ggaaagcttttctattcgcagagtgcgccgccagttgatattacgccggagaattaccta
tgtcgcttcaaagccatcgggtacagtcgcatgcccggcaaggataacaaactgggacta
gtggctcttaactttgatagggatctttcggccatcaagccgcaccagcaacaagtgatt
caaacccttcacagtttgtttggcggcaagcccaacatgatggtgcacgttgaaaccata
aaagagttggagaataaaaagtgtcagatggttatctacgtggatgagaaactgcagcat
gcaccgaacgagggaaagcgaatattggccactgagctctcaaactatttaaaccaggca
tcgctaaaacctcagctaacgaatctggggattgtggaatcattggccctagtactgccc
gacgaagatcaactgaaggaatatttggagaatcctcccagaggcgtagatccgcgaatg
tggcgtcaagccaatttggataatccagacgctggtaaattcctaccagtgccaatgatt
ggcttcaacgacttgaaatggcgcgtcaaatgccaggagcaggaaacagacacgcatgcc
ctgtatatgaagaaagtggaaggagaactgacggagctgagacaccggcattgcatggct
tcggccaaaatattggagcataagcgcaagctggctgagctcagtcatcgcatacttagg
ataattgtgaagcaagagtgcacacggaaggtgggctcctcgctgacacctgaagaggag
gccttgcgcaccaagctgcagagcatgcaggccgttgtatcggcacccacacagtttaag
gggcggctcagcgagctgctatcccagatgcgaatgcagcggaatcagtttgctggcaat
ggtgggtgcgagtatacgatggacccggaggccgaggatgagatgaagaattttttgacc
atgcaacagcgcgccatggaagtcctgagtgagactgtcaataaggacctcaaagccctt
gatgttattgttaaaggattgcccgaacttaagcaggcatga
DBGET
integrated database retrieval system