Drosophila pseudoobscura: 4804120
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Entry
4804120 CDS
T01032
Name
(RefSeq) maternal effect protein staufen
KO
K17597
double-stranded RNA-binding protein Staufen
Organism
dpo
Drosophila pseudoobscura
Brite
KEGG Orthology (KO) [BR:
dpo00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
dpo01009
]
4804120
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dpo03019
]
4804120
Protein phosphatases and associated proteins [BR:
dpo01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
4804120
Messenger RNA biogenesis [BR:
dpo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
4804120
mRNA cycle factors
Stress granule specific factors
4804120
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
dsrm
Staufen_C
Dicer_dsRBD
Motif
Other DBs
NCBI-GeneID:
4804120
NCBI-ProteinID:
XP_001360731
UniProt:
A0A6I8UTY9
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All DBs
Position
3:complement(10211013..10218689)
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AA seq
1008 aa
AA seq
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MQHNVHTARPAPHIRAHHHTHGHTHMQMHPSLEQHLAAAASMAGAPQMQQQQQPAPHRDH
HHPRLNHHHLHAQQQQTSSNPAAVAVAAGPAYHHSSNISSSSNNNQMQKIRQQHQHLSTS
NGHVGKCNQPLPQAYNPLAGNPAALSYNPLPPPPPPPHHMATHIGSYAAHPPHYYQMSQP
KPPSKYNNNSGGHYIPNSGTSNGYAPKAILQTTYRNAKVAPVMAPAMVPEAVVVAAVPAP
TAELPEGVNSSVLPGATESTCLEELPQLEQPNVEQSTTETGAPTVNNFSSTEHIDATGTL
PNEDSSSGRSGKDKTPMCLVNELARYNKITHQYRLTGERGPAHCKTFTVTLKLGDEEYSA
DGFKIKKAQHMAASRAIEETKYKHPPPKIRRSEEASTTRTHITPTVELNALAMKLGQRTY
YLLDPTQMQPTDPLMPSEFGGGSLLPTPPPGMQQPMPQPLPPPFALRPARHGHSFVPIPS
PPMHPHGFYNPQRAYGPKYASRYTMVPPLGPHMIHGPNMSYAPIPPTPSKITLYVGKQKF
VGIGRTLQQAKHDAAARALQVLKTQASSASEEALDDSMDEGDKKSPISQVHEIGIKRNMT
VHFKVLREDGPAHMKNFITACVVGSIVTEGEGNGKKLSKKRSAEKMLTELQKLPPLTPTK
QTPVRRIKVKTPGKNGSANGNGGGTTISLSDVVSMAKPERRKRLNVAIRPVELDDAENPI
TKLIQLQQTRKEKEPIFELIAKNGNEASRRREFVMEVSASGTTARGTGNSKKLAKRSAAQ
ALLELLESDEHRNAVQVSQDSTIDSNPTEIATATATSAPVIEAIAETDIPMVSTPVGPMP
GILILRQHKRPPKRKVDPMIIVKDSEDTKEEEEEANKETTTTRTDDNSSSSEPQPNEAAA
ENTLNTSTGSNTSGVSSNSSNTAASSSASAAVHMKEQLLYLSKLFEFEVNFSDYPKGNHN
EFLTIVTLSTNPPQICHGVGKSSDESQNDAARNALKILSELGLNNAKK
NT seq
3027 nt
NT seq
+upstream
nt +downstream
nt
atgcagcacaatgtgcacaccgccagaccggcgccccacatacgcgcccatcaccacact
cacggccacactcacatgcagatgcatccaagcttggagcagcatctggcagccgcggca
tcaatggccggcgctccccagatgcagcaacaacagcagccggctccacatcgcgatcat
catcatccacgactgaaccatcaccatctacacgcacagcagcagcagacgtcgtcgaat
cctgccgccgttgccgtggcggctggacctgcctatcaccacagcagcaacatcagcagc
agcagcaacaacaaccaaatgcaaaagatccgacagcagcatcagcatctcagcaccagt
aacgggcacgtgggtaaatgcaaccagcctctgccgcaggcctacaaccctctggctggc
aatccggccgctctctcgtacaatccgctgccgcctcctccgccgccgccgcaccacatg
gccacccacatcggcagctatgcagcccatccgccccactactaccaaatgagccagccc
aagccgccctcaaagtacaacaacaacagtggcggccactacatccccaacagcggcacc
agcaacggctatgcccccaaggccatcctacagacaacatatcgcaatgccaaagtcgca
ccagtcatggccccagcaatggtccccgaggcagtggtagtggcagcagtaccagcacca
acagcagagcttccagaaggtgtgaatagcagcgtcctaccgggagctacggaatccaca
tgtttggaggagttgccgcaactggagcagccgaatgtggagcaaagcacaacggagacg
ggagcgccaacagtaaataacttcagcagcacagagcacatcgatgcgacgggcacgctg
cccaacgaggacagcagctcgggacgcagtggcaaggacaagacgcccatgtgcctggtc
aacgaactggccagatacaacaagatcacccaccagtaccggctgacgggcgaacgggga
ccggcccactgcaaaaccttcacggtcaccttgaagttgggcgatgaggagtattcggcg
gacgggttcaagataaagaaggcccagcacatggccgcctccagggccatcgaggagacc
aagtacaagcatccgcctccgaagatacgccgcagcgaagaagccagcaccacacgcacc
cacatcacacccaccgttgagctgaatgcgctggccatgaagctggggcagcgcacctac
tacctgctggaccccacacagatgcagcccaccgatccgctaatgccgtcggagtttgga
gggggctcccttttgcccacaccaccgccagggatgcagcagcccatgcctcagccactg
ccacctcccttcgccctgcgccctgcacgacatggccacagtttcgtgcccattccttcc
ccgcccatgcatccacatggcttttataatccccagcgggcttatgggcccaaatatgcg
tcacgatatacgatggtgccgccgctagggcctcacatgatccacgggccaaatatgtcc
tacgccccgattccacccacgcccagcaagatcaccttgtacgtgggaaagcagaaattc
gtgggaatcgggcgcacgctgcagcaggccaagcacgatgcggcggcacgggctctgcag
gtgctcaagacgcaggccagctcagcgtcagaggaggcgctcgacgactctatggacgag
ggcgacaaaaagtcgcccatctctcaggtgcacgagatcggtatcaagcgcaacatgact
gttcacttcaaggtgctgcgcgaggatggaccggcccacatgaagaacttcatcacggcc
tgcgtcgtgggtagcatcgtcaccgagggagagggcaacggcaagaagctgtcgaagaag
cggtcggccgaaaagatgctcacagaattgcagaagctgccgccactcacgcccaccaag
cagacgccagtaaggcgcatcaaggtgaagacgcctggcaaaaatgggtcggcgaacggc
aatggaggtggcacaaccatttcgctatcggacgtggtctccatggcaaagccggaacgg
cggaagcgactcaatgtcgccatcagacctgtggagctggacgatgccgagaaccccata
acgaagctcattcagctgcagcagacgcgcaaggaaaaggagcccattttcgaactgata
gcgaagaacggcaacgaagcctccaggcggcgcgagttcgtcatggaggtgtcggccagc
ggaaccacagcccgaggaacgggcaacagcaagaagctggccaagcgcagtgcagcgcag
gctttgttagaattactggaatcggatgagcataggaacgcagtccaggtgtcacaggat
tccacaatcgatagcaatccaacagaaatagcaactgccacagcgacatcagcgccagta
attgaagccattgcagaaacggatattccgatggtctcaacgccagtgggccccatgccc
ggtatcctgattctgcgccagcacaagagaccacccaaaaggaaagtggatccaatgatt
attgtcaaggacagcgaagataccaaggaggaggaagaggaagccaacaaggagacaacg
accacaaggacagacgacaacagcagcagcagcgagccacaacccaatgaggcagccgcc
gaaaatacgctgaatacatcgacggggagcaacacgagtggcgtgagcagcaatagcagc
aataccgctgccagcagtagtgcatccgcagccgtacacatgaaggagcagcttctgtac
ctaagcaaattgtttgaatttgaggttaatttctcggactatcccaagggaaaccacaac
gagttcctcacgattgtgacgctctcgacgaacccgccgcagatctgccatggcgttggc
aagagctccgacgagtcgcagaacgacgctgcgcgcaatgccttaaaaatcctcagcgaa
ctgggcctcaacaatgccaaaaagtaa
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