Drosophila pseudoobscura: 4804459 Help Entry 4804459           CDS       T01032                                  Name (RefSeq) DNA repair protein RAD50   KO K10866   DNA repair protein RAD50 [EC:3.6.-.-] Organism dpo  Drosophila pseudoobscura Pathway dpo03440   Homologous recombination dpo03450   Non-homologous end-joining Brite KEGG Orthology (KO) [BR:dpo00001]  09120 Genetic Information Processing   09124 Replication and repair    03440 Homologous recombination     4804459    03450 Non-homologous end-joining     4804459  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03032 DNA replication proteins [BR:dpo03032]     4804459    03400 DNA repair and recombination proteins [BR:dpo03400]     4804459 DNA replication proteins [BR:dpo03032]  Eukaryotic type   DNA Replication Termination Factors    MRN complex     4804459 DNA repair and recombination proteins [BR:dpo03400]  Eukaryotic type   DSBR (double strand breaks repair)    HR (homologous recombination)     MRN(MRX) complex      4804459     BRCA1-C complex      4804459    NHEJ (non-homologous end-joining)     MRX complex      4804459 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  AAA_23 Rad50_zn_hook SMC_N AAA_15 SbcC_Walker_B AAA_21 AAA_29 ABC_tran AAA_22 AAA_16 Motif Other DBs NCBI-GeneID:  4804459 NCBI-ProteinID:  XP_033233234 UniProt:  A0A6I8VR81 LinkDB All DBs Position 3:12638993..12643613 Genome browser AA seq 1309 aa AA seqDB search MSSIDKLSIQGVRSFGSNAEDLQSLTFSSPVTLILGENGCGKTTVIECIKYALTGESPPG SDRGKSFVHDPKIFGLNESLAQIKMQVRDKRGARVSICRTMKVCSKRGKVSFETMDSTIN FLTDAGHSKRENQDSLSGRTVDIDLAISDFMGVSKAIINNVLFCHQEDSSWPLDEAKKLK EKFDAIFGITEYNKALDKIIKMRKEAMDELKVMEAGMKHVAYLKQEMEVKTLGLQKAQKK CDSIKAQCSECEEEMKPIESRLQEIRDIEYEIGKHQAQKVEMDTKHKNCKEQISALSRKI KTHFEGSLVDLDLEIDNFHQRMSEMRLKRSETEEQLSKLKKSHGETHQTQTAQDKKCCLA KQRHQSEQACKTQLVKRVKDLCHELQIPIPGDLMAEPEKLVDLLQDIEGVILSKHCEITE VSGLNDNADKARQVKIDELRIDLTKSEQGVTAQEKQKEASQRESETLKVKVQQIETSMQE LKLLEKQIADADAIYERTSKNFNQENFREIIAGKKANIAQKQALFKKLDEKLTFLGSMAK LVAEMNLKEKEVEKKNQEIHRVRSRHSDNFGKFFKEPISSNYRRSLQGAYDKVRREIQDL NEQANAQKLKEQSYEIKRKNLIAETARMEKELKEAEELIFQKCRSTPYDELLDRSKLAIS KLQLEHGAHKSAEALYKKYIQKINEEPCCPLCHHNMSGDEACDLTTELSDEIQKLPDNIS RSEKALKAEQLKYENLLHIKPSILKVKELKEILPKKKEELTEVEMLLGETVSEYETLIAL IGEPTQNMDLANSMLGDMTLLDEALKDSVRVKKDLDQLKSKLPASYDSSVSMDALQAEKS QVSKDLETERKELDSTQHTFEQHVDALNRLREVKNGLKDKQLKLQEGLQSLPQLKERLNE LIQLLVTITTEISELKAKIQPLKQKLRAAIDEKERLKEAERKKLSQLNSKYNSYKSTDQD IQRLHKEAQDYAKLDLKNEISTLEDSIRATKEQLKQLEAEIKSKTVQLESVNTECLNQQT VERDLKDNRELKQLQDNETELRKTCENLAKKLGNLDLRNVSREKMDLTKRREAGTVRKGE LLGQLGEIRSQVERLQREIDEPRFREAVKNFRKGNYEMVVTRHSIDDLAQLRFALEWALI QFHAEKMEKINRLIREYWRMIYRGNDIDYIQVKTDEVNTDASADRRKTYNYRVVQSKNNT EIEMRGRCSAGQRVLASLIIRMALAETFSSNCGVLALDEPTTNLDRINITSLCDALNCIV EERQTQSNFMLIIITHDENFISSLGKITSYHRVFRNDECKSVIRKVQIS NT seq 3930 nt NT seq  +upstreamnt  +downstreamnt atgtcgtcaattgataaactgtccattcagggtgtgcgtagctttggatccaatgcagaa gatcttcagagccttacattttcgtcgcctgttaccctgattctgggtgagaatggctgt ggaaagacaacagtaattgagtgcatcaagtatgctctgacgggagagtccccgcctggt agtgacagggggaagagctttgtccacgacccaaagatttttgggctgaatgaatccttg gcgcaaatcaagatgcaggttcgggacaaacgcggtgcccgtgtgtccatctgtcgcacc atgaaagtctgcagcaagcgtggcaaggtctcgtttgagactatggactccactatcaac tttctaactgatgcgggacattcaaaacgtgagaaccaggactcattgagcggccgcaca gtggacattgatttggccatctctgacttcatgggcgtgtcgaaggctatcataaacaac gtcctattctgtcaccaagaggactccagttggccgctggacgaggccaagaaattaaag gagaagttcgatgctatatttggcattaccgagtacaacaaagccctggataagattatt aagatgcgaaaggaagcaatggatgagctcaaggtaatggaggccggaatgaagcatgtg gcgtatcttaagcaagagatggaagtaaaaacgctgggcctgcagaaggctcagaaaaaa tgtgattccatcaaagcgcagtgcagtgaatgcgaggaggagatgaaacccattgagtct aggctgcaggaaatccgagacattgaatatgagattggaaaacatcaggcgcagaaagtg gaaatggataccaagcataagaactgcaaggagcaaatttcagccctttccaggaaaatc aagacccattttgagggttctttggttgacttggatctagagatcgacaactttcatcag cgaatgtccgaaatgagactcaaacgttccgaaacggaagaacaattgtccaagctaaaa aagtcccacggagaaacgcatcagacacagaccgcgcaagacaagaaatgttgcctggcc aagcagcggcaccagagcgagcaggcgtgcaagacacagttggtaaagcgggtcaaggat ctctgccatgagttgcaaattcccataccgggtgatctgatggcagagcccgagaaactg gttgacttattgcaggacatcgaaggggtcatcttgagcaagcactgtgagatcacagaa gtctccgggctcaacgacaacgcggataaggccaggcaggtgaagatcgacgaactgcgc attgatttaaccaagtcggaacaaggcgtaacggcgcaggaaaagcaaaaggaggccagc caacgggagagtgagacactgaaggtaaaggttcagcaaattgaaacctccatgcaggaa ctgaagctgctggagaagcagatagccgacgccgatgccatctatgagcgcacatcgaaa aacttcaatcaggagaatttccgggaaatcatagccggcaaaaaggctaacatagcccaa aaacaggctctcttcaagaaactggatgagaaactgacgttcctggggtccatggccaag ctggtggccgaaatgaatctcaaggaaaaggaggtggagaagaagaaccaggagatccat cgcgtgcgcagtcggcactcggataattttggaaagttcttcaaggagcccatctccagc aattatcgccgctccctgcaaggtgcctacgacaaggtgcgtcgcgagatccaagatcta aacgagcaagccaatgcccaaaagctcaaggaacaatcgtatgagataaagcgcaagaat ctcattgctgagactgctcgcatggaaaaggagctgaaggaggccgaggagctcatattt caaaagtgccgctccacaccatacgatgagcttctggatcgtagcaagttggccatttcc aagctgcagcttgagcatggtgcccataaatctgcagaggctctgtacaagaagtacata cagaagatcaatgaagagccgtgctgtcccctatgtcatcacaatatgtcgggcgatgag gcctgtgatctaaccacggagctatccgatgaaatccaaaagttgccagacaacatcagt agatcggaaaaggctctgaaagcagagcaattgaagtacgagaacttgttgcacatcaaa cccagcattcttaaggtgaaggagctaaaagagatcttgcccaagaagaaggaagagctg accgaagttgagatgctactgggagagactgtcagcgaatatgagacgctgattgccctg attggagagcccacccaaaacatggacctagccaattcaatgctgggcgatatgactctg ctcgatgaagccctcaaggattctgtgcgtgttaaaaaggatctggatcagcttaagagt aaactaccagcttcgtatgattcgagtgtatcgatggatgctctgcaagcggagaagagt caggtctcgaaggacttggagacagaacgcaaggagttggacagcacgcagcataccttt gagcagcacgttgacgctctcaatcgtttgcgtgaagttaaaaatggattaaaagataag caactaaagctgcaagaggggctgcagagcttgccacagttgaaggagaggctcaatgaa ctgattcaacttctcgtcaccataaccacagaaataagcgagctgaaggccaagattcaa ccgctcaaacagaagctaagggctgctatagacgagaaggagcgtctgaaagaagccgaa cgtaaaaagttgagtcagcttaattctaaatataattcctacaaaagtacagatcaggat atacaaaggttgcacaaagaagctcaggactatgctaaattggatctgaagaatgagatc agcacactcgaagactccataagggccaccaaagaacagctgaaacaattggaagccgaa ataaaatcgaaaaccgtgcaactggaaagcgtaaacaccgagtgtcttaatcagcagacc gttgagcgcgacctgaaagacaatcgcgagctcaagcagctgcaggataacgaaacagag ctgagaaaaacctgtgagaatctggccaaaaagttgggcaatttggacttgcgcaacgtc agcagggagaaaatggatttaaccaagagacgggaagctggcacagtgcgcaagggagag ctgctgggccagctgggcgagattcgcagtcaggtggagagactgcagcgggagatcgat gaaccccgattcagggaggcggttaagaatttcagaaaaggcaattacgagatggttgtc acgcgacacagtattgatgacttggcccagcttcgatttgccttggaatgggccctcata cagttccatgcggagaagatggagaaaatcaaccgactaattcgggaatactggcgtatg atctatcgcggaaacgacatcgactacatacaagtgaagaccgacgaggtcaacacagat gcatctgctgatcgccgcaaaacctacaactatcgcgtggtccagtccaagaacaacacg gagatcgagatgcgtgggcgctgcagcgccggccaacgggtgctggcctctctcatcatc cggatggctctagccgagacgttcagcagtaattgtggagtcttggctctggacgagcca accacgaacctggatcgcatcaacatcacatcgctgtgcgatgccctcaactgcattgtg gaggagcgtcagacgcagtccaacttcatgctaatcatcatcacccacgatgagaacttt atctcctcgctgggcaagatcaccagctatcatcgtgtgttccggaacgatgagtgtaaa tcggttatacgcaaagtgcaaatcagttga

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