Drosophila pseudoobscura: 4804548
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Entry
4804548 CDS
T01032
Name
(RefSeq) exosome complex component RRP4
KO
K03679
exosome complex component RRP4
Organism
dpo
Drosophila pseudoobscura
Pathway
dpo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dpo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
4804548
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dpo03019
]
4804548
Messenger RNA biogenesis [BR:
dpo03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
4804548
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
4804548
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RRP4_S1
KH_6
ECR1_N
ECR1_N_2
Motif
Other DBs
NCBI-GeneID:
4804548
NCBI-ProteinID:
XP_001361091
UniProt:
A0A6I8UUQ5
LinkDB
All DBs
Position
3:13294028..13295112
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AA seq
298 aa
AA seq
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MATNATIELALDRVDWCALAERQDVLPRVYTPGEVVMPEAGFMRGHGTFVEDENIKASVA
GVIEKVNKLISVRPLKSRYVGEIGDVVVARVIEVQQKRWRVDTNSRLDSILLLSSVNLPG
GELRRRSAEDEQMMRRYLDEGDLISAEVQNIFEEGTLSLYTRSLKYGKLSQGVLVKVFPA
LVKRRKMHFHNLPCGASVILGNNGYIWISPPKSQDQEGGEGGFAQNLGEAVPRNEREVIA
RLRNCILALAKCKLMLYDTSIQYAYDESLKYEAHELLQQNVIYDIGEQTQARLRDGDE
NT seq
897 nt
NT seq
+upstream
nt +downstream
nt
atggccacaaacgccacaatagagctggcgctggaccgcgtggactggtgtgccctggcc
gagcggcaggacgtattgccgcgcgtctacacacccggagaagttgtcatgccggaggca
ggcttcatgcgcggacacggcacgttcgtagaggatgagaacatcaaggcctctgtggcc
ggcgtgattgagaaggtgaacaaactgatctccgtgcgtccactcaagagtcgatatgtg
ggcgagatcggtgacgtggtggtggcgcgcgtgatcgaggtgcagcagaagcgctggcgc
gtggacacaaattcccgcctggactccatacttctgctgtcatcggttaatctgcccggc
ggagagctgagacggcgctccgcagaggatgagcagatgatgcgacgctatctggacgaa
ggcgatctcatttccgccgaagttcaaaatatcttcgaggagggcacgctttcgctgtac
acccgaagtttgaagtacggaaaactgtcgcagggcgtactcgtcaaggtcttccccgcg
ctggtcaagcgtcgcaagatgcacttccataatctgccctgtggagcgtccgtgatcttg
ggcaacaacggctacatctggatatcgccccccaagagtcaggatcaggaaggcggcgag
ggtggctttgcccagaatctgggggaagcggtgccacgaaacgagcgcgaagtgatagcc
cgcctgcgcaactgcatcctggccctagcaaaatgcaaactgatgctctacgacaccagc
atacagtatgcctacgacgagtcgctcaagtacgaggcccacgaactgctccaacagaac
gtcatatacgatatcggcgagcagacgcaggctcgtctgcgggatggagatgaatag
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