Drosophila pseudoobscura: 4812120
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Entry
4812120 CDS
T01032
Name
(RefSeq) DNA polymerase delta catalytic subunit
KO
K02327
DNA polymerase delta subunit 1 [EC:
2.7.7.7
]
Organism
dpo
Drosophila pseudoobscura
Pathway
dpo03030
DNA replication
dpo03410
Base excision repair
dpo03420
Nucleotide excision repair
dpo03430
Mismatch repair
dpo03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
dpo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
4812120
03410 Base excision repair
4812120
03420 Nucleotide excision repair
4812120
03430 Mismatch repair
4812120
03440 Homologous recombination
4812120
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dpo03032
]
4812120
03400 DNA repair and recombination proteins [BR:
dpo03400
]
4812120
Enzymes [BR:
dpo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
4812120
DNA replication proteins [BR:
dpo03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase delta complex
4812120
DNA repair and recombination proteins [BR:
dpo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase delta complex
4812120
MMR (mismatch excision repair)
DNA polymerase delta complex
4812120
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_B
DNA_pol_B_exo1
zf-C4pol
POL3_N
REV3_N
DNA_pol_B_2
DNA_pol_B_exo2
DUF6356
Motif
Other DBs
NCBI-GeneID:
4812120
NCBI-ProteinID:
XP_001353021
UniProt:
A0A6I8UC12
LinkDB
All DBs
Position
X:complement(60913723..60917249)
Genome browser
AA seq
1093 aa
AA seq
DB search
MMDAKRKFNSNTNGQAKKPRNPDEDEEMDFEAELAAFENSEELDQTLLLGEGPENQQTSE
RWSRPPPPKLDPRTDNLEFQQLDVENYMGQPLPGMPGAQLGPVPVVRMFGVTMQGNSVCC
HVHGFCPYFYIEAPTKFEEYHCEKLQKSLDQKTIADIRNNKDNVQEAVLMVELVEKLSIH
GYNGDQKQRYIKITVTLPRFVAAASRLLKKEVIMAEIDFQDCRAFENNIDFDIRFMVDTG
VVGCNWIELPQGHWRLRSGNSKPLPESRCQIEVDVAFDRFISHEPEGEWSKVAPFRILSF
DIECAGRKGIFPEAKMDPVIQIANMVIRQGEPEPFIRNVFTLNVCAPIIGSQVLCHDKET
QMLDKWSAFVREVDPDILTGYNINNFDIPYLINRAAHLKVKNFEYLGRIKNIRSVIKEQV
LQSKQMGRRENQYVNFEGRVPFDLLFVLLREYKLRSYTLNAVSYHFLQEQKEDVHHSIIT
DLQNGDEQTRRRLAMYCLKDAYLPLRLLEKLMAIVNYMEMARVTGVSLECLLTRGQQIKV
LSQLLRKAKTKGYIMPSYTPQGSDEQYEGATVIEPKRGYYADPISTLDFASLYPSIMMAH
NLCYTTLVLGGSREKLREKDGLQDEQVVRTPANNYFVKSEVRRGLLPEILESLLAARKRA
KNDLKVETDPFKRKVLDGRQLALKISANSVYGFTGAQVGKLPCLEISGSVTAYGRTMIEL
TKNEVESHYTRENGYENDAVVIYGDTDSVMVNFGVKTLERSMELGREAAELVSAKFVHPI
KLEFEKVYYPYLLINKKRYAGLYFTRPEAYDKMDCKGIETVRRDNSPLVANLMNSCLQKL
LIERDPDGAVTYAKQVIADLLCNRIDISQLVITKELAKTDYAAKQAHVELAAKIKKRDPG
TAPKLGDRVPYVICAAAKNTPAYAKAEDPLYVLENSVPIDATYYLEQQLSKPLLRIFEPI
LGEKAESILLKGEHTRTRTVVTSKVGGLAGFMTKKSACLGCKTLMPKGYEKACLCPHCEP
RMSELYQKEVGAKRGLEETFARLWTECQRCQGSLHEEVICSNRDCPIFYMRQKVRMELDT
QEKRVLRFGLAEW
NT seq
3282 nt
NT seq
+upstream
nt +downstream
nt
atgatggacgccaagcgtaaatttaatagcaacaccaatggccaggccaagaagcccaga
aatcccgacgaagatgaggaaatggacttcgaggccgagctggcggcctttgagaacagc
gaagagctagaccagactctactccttggcgagggacccgagaatcaacagacaagcgag
cgctggtcacggccaccacctcccaaactggatcccagaacagacaacttggagttccag
caattggatgtggagaactatatgggccagccgctgcccggcatgcccggagcccagctg
ggacccgtgccggtggtgcgcatgttcggtgtcaccatgcagggcaactcggtgtgctgc
catgtgcacggcttctgtccgtacttctacatagaagccccaacgaaattcgaggaatat
cactgcgagaagctgcagaagtcgctagatcagaagactatagccgatatacgcaacaac
aaggacaatgtccaagaggcagttctgatggtggaactggtggagaagctcagcatccat
ggctacaacggagaccagaagcagcggtacatcaagattacagtgactctgccacggttt
gtggccgccgcctcgcgcctgctcaagaaggaggtgatcatggccgaaatcgatttccaa
gactgccgcgccttcgagaataacatcgactttgacatacgcttcatggtggatactggc
gttgttggctgcaactggatcgagctgccccagggccattggcggctgaggagtggtaac
agcaagccgctgcctgaatcccgctgtcagattgaggtggatgtggcctttgacaggttc
atctcccacgaaccagagggggaatggtccaaggtagcccccttccgcatcttgtccttt
gacattgaatgcgctggccgaaagggcatcttccccgaggccaaaatggatccagtaata
caaatcgccaacatggtcatccggcagggcgagccagagcccttcatccgcaatgtcttc
acactgaatgtgtgcgctccgatcattggcagccaggtgctgtgccacgacaaggagacc
cagatgctggacaagtggtccgcgtttgtgcgcgaggtggatccggacattctcaccggc
tacaacattaacaactttgacattccctatctgataaatcgggcagcccacctgaaggtg
aagaatttcgagtatctgggcaggattaagaacatacgatccgtgatcaaggagcaggtg
ctgcagtccaagcaaatgggtcgccgcgagaaccagtatgtgaacttcgagggacgcgtg
cccttcgatttgctgtttgtcctgctgcgggaatataaactccgttcgtacacccttaac
gccgtgagctatcacttcctgcaggagcagaaggaggatgtgcaccacagcattatcacg
gacctgcagaacggggacgagcagacacggcgccgcctggccatgtactgcctcaaggat
gcgtatttgccactccgcctgctggagaagctcatggcgatagtcaactacatggagatg
gccagggtaacgggcgtctccctggagtgcctgctcacccgcgggcagcagatcaaagtg
ctcagccagctgttgcgcaaggccaagaccaagggctacataatgccctcgtacacgccc
cagggatcggacgagcagtacgagggagccacggtaatcgaaccgaagcgtggctactac
gcagatcccatatccacgttggatttcgcctcgctgtaccccagcataatgatggcccac
aatctctgttacaccaccttggtgctggggggaagccgggagaagctcagggagaaggat
ggcctgcaggatgagcaagtggtacgtacgccggccaacaattactttgtcaagtcggag
gtgcgacgaggtctgctgccagagatcctggaatccctgctggctgcccgaaagcgtgcc
aagaatgatctgaaagtggagaccgacccattcaagcgcaaggtcctcgatggccgccaa
ttagcactgaaaatctcagccaactctgtgtacggtttcaccggggcccaagtgggcaag
ctgccatgccttgagatctctgggagcgtcacagcctacggcagaaccatgatagaactg
accaagaacgaggtggaatctcactacacccgggaaaatggatacgagaacgatgccgtt
gtcatctacggcgacacggactctgtgatggtgaatttcggcgtcaagactctcgagcgg
agcatggagctgggcagggaggcggccgagctggtaagcgccaagtttgtccatccgata
aagctggaattcgagaaggtctactatccctacctgctgatcaacaagaagcgctacgca
ggattgtacttcacccggccggaggcctacgacaaaatggactgcaagggaatcgagacg
gtgcggcgcgacaactctccgctggtggccaacctgatgaactcctgtctacagaagctg
ctcattgagcgagaccccgacggagccgtcacctatgccaagcaggtgattgcggatctg
ctctgcaatcgcattgacatctcccagctagttatcaccaaggagctggccaagactgac
tatgcggcaaagcaggcgcacgtggagctggccgccaagataaagaaacgcgatccgggc
acagccccgaagctgggagatcgcgttccctatgtgatctgtgcggcggccaagaacacg
ccggcctatgcaaaggccgaagatccgttgtatgtcctggagaacagtgtgcccatcgat
gccacttattatttggaacagcagctgtccaagccgctgctgagaatattcgagccgatc
ctaggggagaaagcagagtccatactcctcaagggagagcacacacgcacccgcactgtg
gtcacgtccaaggtgggcggcctggccggattcatgaccaaaaagtcagcctgcctgggc
tgcaaaacgctgatgcccaagggctatgagaaggcgtgcctgtgcccgcactgtgagcca
cggatgagtgagctataccagaaggaggtgggcgccaagcgagggctcgaggagaccttt
gcccgcctgtggaccgaatgccagcgctgccagggatcgttgcacgaggaggtaatctgc
tcgaaccgcgactgtcccatcttttacatgagacagaaggtacgcatggagctggacaca
caggagaagcgtgtgctgagatttggactggccgaatggtaa
DBGET
integrated database retrieval system
