Drosophila pseudoobscura: 4812371
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Entry
4812371 CDS
T01032
Name
(RefSeq) small RNA degrading nuclease 5
KO
K14570
RNA exonuclease [EC:3.1.-.-]
Organism
dpo
Drosophila pseudoobscura
Pathway
dpo03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
dpo00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
4812371
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
dpo03009
]
4812371
Ribosome biogenesis [BR:
dpo03009
]
Eukaryotic type
Pre-60S particles
RNases
4812371
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_T
CEP76_C
Motif
Other DBs
NCBI-GeneID:
4812371
NCBI-ProteinID:
XP_001352851
UniProt:
Q29DR2
LinkDB
All DBs
Position
X:63881087..63886535
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AA seq
744 aa
AA seq
DB search
MAPNQQKDPQSVEASGRTPTVQLTRAERLKIRLVNMKEQVSAKQQERSEKKKKKLAALAN
LMDLNDRDRVHEAELARKRDSESKSSGAEADLTDEPQTNKSHNEAERSSGVEAADDGFFT
VSSKRKVKNRHTIRSTPEETSTADATDAETVHIDQPQTKRIRKDEAAGGDSLPDDTLVTL
SEEQYKALSADLRRRKRRLQDVPALRLREMGQRALLETPQDARTPIFLSDIQNLLMSGMI
GQKSPCRPDRWCSTEKWVSLSHSVVVILEGLSLYHYLSNESQFEATNRIFNAKLELMLPQ
QAEGMIIDEIAQIPLTSVQAKKLIDEHGCLESAVALNQDPTLFVRGIFNISGEEPGMELP
HLHPDDKFPRTKLLLSALQMVDEGYPIPLQGELHSRFRAYKFTKPSYKPVNNHSPMYGVD
CEMCRTVAGVNELTRISIVDEEYRTVYETLVMPDNRIVDYLTQYSGITEDIMKQVTKQLK
DVQREVSALLPDDAILVGQSLNSDLNAMRMMHPYVIDTSVCFNMSGIRRRKSKLKHLAMT
FLKETIQENEYGHDSIEDSRATLKLVKMKLANSIEFGDEIMTQQKRLQEIANACSGDSIT
NNMFAHSAKRDRRTAIVNVGDLQPRLKEIIQKAEQVVPKDTSSSVLVHEVATTKEAVRKV
TEIALENSLTIANLPIPEEDFLLDKAERSAAKIDKVIERLWNTVAHNGLFLVLMGGSAEC
PKGVAKIAIKRLNGTEQTSAPINS
NT seq
2235 nt
NT seq
+upstream
nt +downstream
nt
atggcacccaatcagcagaaggatccccaatcggtggaggcgagcggaaggacacctacg
gtacagctgactcgagcagaacgcttaaaaatcaggcttgtcaatatgaaggagcaagtc
tcagcaaaacagcaggaacgcagcgaaaagaagaaaaagaagctggccgcattggcaaat
ctgatggacctgaacgatcgggatcgtgtacatgaggcggagctggcgaggaagcgggat
tccgagtcaaaatcaagcggcgccgaggctgatctcacagatgagccacagacgaacaaa
agtcacaatgaggcggagcggtccagcggtgtagaggcggcagacgacggctttttcacc
gtgagcagcaagcgaaaagtcaagaatcggcataccatcagaagcacccccgaagagacc
tcgacagcggatgccacagatgcggagacggtccacatagatcagccacagacgaaacgc
attcgcaaagatgaggcagctggtggcgacagcctacccgatgacacgttggttactctt
agcgaagaacaatacaaggccctttcggcggatctgcggcgacgcaagcggcgactgcag
gatgttcccgccttgcggctgagggagatggggcagcgtgcgttgctggagacgcctcaa
gatgcgcgcacacccatcttcctcagcgatatacagaacctgctgatgtcgggcatgatt
ggccagaagagtccctgccggccagaccggtggtgctccaccgaaaagtgggtgagtctc
tcgcacagcgtggtggtcatcctggagggcctctccctgtaccactacctctccaatgag
agccagttcgaggccaccaataggatcttcaacgcgaagctggagcttatgctcccccag
caggctgaaggcatgattatcgatgagatcgctcagattccgttgaccagtgtgcaagcc
aagaagctaattgacgagcacggttgcctggaatctgcagttgccctcaaccaggatccc
acactgttcgtgaggggtattttcaacattagtggcgaggagccgggcatggagctgcct
catctgcatccagatgacaaattcccgcggaccaaactcctgctctccgccctgcaaatg
gtcgacgagggctatccaatccccttgcagggagagctccacagccgcttcagggcctac
aagttcacaaagccatcgtacaagccggtcaacaaccacagtcccatgtacggcgtggac
tgtgaaatgtgtcgcactgtggccggggtcaacgagctgacgcgtatttccattgtagac
gaggagtacaggactgtttacgagacgctggtgatgcccgacaacaggatcgtggattac
cttacccagtactcgggcattaccgaggacatcatgaagcaggtgaccaagcagctgaag
gatgtgcagagggaggtgtcagcactgctgccagacgatgccatcctcgtgggacagtcc
cttaactccgatttgaatgccatgcggatgatgcatccgtatgtgatcgacaccagcgtg
tgcttcaacatgtccggaattcggaggcggaagagcaaattgaagcatctggccatgact
ttcctcaaggagaccatccaggagaacgagtacggccacgactcgatcgaagactccagg
gcaacgctaaagctcgtgaagatgaagctcgctaacagcatcgagtttggcgacgagatt
atgacccaacagaagcgtctgcaggagatcgccaatgcctgcagcggcgacagcatcacg
aacaacatgtttgcacattcggccaagcgggacaggaggacagcgatcgtgaatgtggga
gacctgcagccgcgcctcaaggagatcatacagaaggccgagcaggtcgtccccaaagac
accagcagttctgtcctcgtgcacgaggtggccaccaccaaagaagctgtccgaaaagtc
accgaaatagcgctagagaactctctgaccattgccaatctcccaatccccgaagaggac
ttcctcctggataaagctgaacgcagtgctgccaaaatcgacaaggtcatcgagcgtctg
tggaacacagtggcccacaatggcctcttcctcgttctcatgggcggctcggcagagtgc
cccaagggtgtggccaaaatagccatcaagcgattgaatggcaccgaacagactagtgct
ccaatcaacagttag
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