Drosophila pseudoobscura: 4812550
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Entry
4812550 CDS
T01032
Name
(RefSeq) splicing factor 3B subunit 3 isoform X1
KO
K12830
splicing factor 3B subunit 3
Organism
dpo
Drosophila pseudoobscura
Pathway
dpo03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
dpo00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
4812550
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dpo03021
]
4812550
03041 Spliceosome [BR:
dpo03041
]
4812550
03036 Chromosome and associated proteins [BR:
dpo03036
]
4812550
Transcription machinery [BR:
dpo03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
4812550
Spliceosome [BR:
dpo03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
4812550
Complex B
4812550
Complex C
U2 SnRNP specific factors
4812550
Chromosome and associated proteins [BR:
dpo03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
STAGA complex
4812550
TFTC complex
4812550
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_RSE1_1st
Beta-prop_RSE1_2nd
CPSF_A
Beta-prop_VPS8
Motif
Other DBs
NCBI-GeneID:
4812550
NCBI-ProteinID:
XP_001352792
UniProt:
Q29DX1
LinkDB
All DBs
Position
X:complement(64839729..64846266)
Genome browser
AA seq
1228 aa
AA seq
DB search
MYLYNLTLQKGTGVTHAVHGNFSGGKQQEILLSRGKSLELLRPDSNTGKVHTLLSTEIFG
CIRALMAFRLTGGTKDYIVVGSDSGRIVILEYMPAKNALEKVHQETFGKSGCRRIVPGQY
FAIDPKGRAVMIGAVEKQKLAYIMNRDTQARLTISSPLEAHKSNTLTYHMVGVDVGFDNP
MFACLEIDYEESDLDPTGDAAQRTQQTLTFYELDLGLNHVVRKYSEPLEEHANFLVSVPG
GNDGPSGVLICSENYLTYKNLGDQHDIRCPIPRRRNDLDDPERGMIFICSATHRTKSMYF
FLLQTEQGDIFKITLETDDDVVSEIKLKYFDTVPPASAMCVLKTGFLFVASEFGNHYLYQ
IAHLGDDDDEPEFSSAMPLEEGETFFFAPRTLKNLVLVDELPSFAPIITSQVADLANEDT
PQLYVLCGRGPRSTLRVLRHGLEVSEMAVSELPGNPNAVWTVKKRADDEFDAYIIVSFVN
ATLVLSIGETVEEVTDSGFLGTTPTLCCAALGDDALVQVYPDGIRHIRSDKRVNEWKAPG
KKSITKCAVNQRQVVITLSGRELVYFEMDPTGELNEYTERSEMPAEIMCMALGTVPDGEQ
RSWFLAVGLADNTVRILSLDPNNCLTPCSMQALPSPAESLCLVEMGHTESTTSAGALDDD
APPQRSGSNKGTIYLNIGLSNGVLLRTVLDPVSGDLADTRTRYLGSRPVKLFRIKMQGAE
AVLAMSSRSWLSYYHQNRFHLTPLSYETLEYASGFSSEQCSEGIVAISTNTLRILALEKL
GAVFNQVAFPLQFTPRTFVIHPDTGRMLIAETDHNAYTEDTKSARKEQMAEEMRSAAGDE
ERELAREMANAFINEVLPEDVFSAPKAGLGLWASQIRCLDAMHGQTMFSVSLTQNEAIMS
MAMVKFSVAADGRYYLAVGIARDLQLNPRISQGGCLDIYKIDPTCSSLEFMHRTEIDEIP
GALCGFQGRLLAGCGRMLRIYDLGKKKMLRKCENKHIPYQIVNIQAMGHRVYVSDVQESV
FFLRYRRAENQLIIFADDTHPRWVTATTLLDYDTIAIADKFGNLSIQRLPHSVTDDVDED
PTGTKSLWDRGLLSGASQKSENICSFHVGEIIMSLQKATLIPGGSEALIYSTLNGTVGAF
VPFTSREDYDFFQHLEMHMRNENPPLCGRDHLSYRSSYYPVKNVLDGDLCEQYLSIEAAK
QKSIAGDMFRTPNQICKKLEDIRTRYAF
NT seq
3687 nt
NT seq
+upstream
nt +downstream
nt
atgtatctgtacaatttgacgctgcagaagggaacgggcgtcacgcacgccgtccatggc
aacttctctggcggcaagcagcaggagatactcctgtcacgtggcaagtcgctggagctg
ctgcggcccgactcgaacaccggcaaggtgcatacgctgctctcgacggagatcttcggt
tgcatacgcgctctgatggccttccgtctgacgggcggaacaaaagattatatcgttgtg
ggttctgattctggccgcattgtcattctggagtacatgcccgccaagaatgcattggag
aaagtgcatcaggagacctttggcaagtctggctgccgtcgcatcgtgccgggccagtac
tttgccatcgaccccaagggtcgagccgtgatgattggcgcagtggagaagcagaagctg
gcctacatcatgaatcgagacacgcaggcgcgcctgacgatctcatctccgcttgaggcg
cacaaatccaacactttgacctatcacatggtcggtgtggatgttggctttgacaatccc
atgtttgcctgcctggagatcgactacgaggagtcggacttggatccaacgggcgacgct
gcacagcgcactcagcagacgctcacattttacgagctggacctgggcctcaaccacgtg
gtccgcaagtactcggagcctctggaggagcatgccaatttcttggtctctgttcctggc
ggcaatgatggaccctctggcgtgctcatttgctcagagaactacttaacatacaagaat
ctcggcgatcagcacgatatacgttgcccgatcccgcgtcgtcgcaacgacctggacgat
cccgagcgtggcatgatcttcatttgctcggccacgcatcgcaccaagagcatgtacttc
tttctgctgcaaaccgagcagggggacatcttcaaaatcaccctcgagaccgacgatgat
gtggtgtcggagatcaagctcaaatatttcgatacggtgcccccagcatcggccatgtgt
gtgctgaagacgggcttcctgttcgtggccagcgaattcggcaaccactatctctaccag
attgctcatttgggcgatgatgatgatgagccagagttcagctcggccatgcccctggag
gagggcgagacattcttctttgcgccacgcaccttgaagaatcttgtactggtggatgag
ttgccttcgtttgcaccgatcattacctcccaggtggctgatctggcgaatgaggacacg
ccccagttgtacgttttgtgtggccgcggtccgcgctcgacattgcgcgtgctgcgccac
ggcctggaggtctccgagatggccgtctccgaattgcccggtaatcccaatgccgtttgg
acagtgaagaaacgagctgatgacgaattcgacgcctacatcattgtgtccttcgtgaac
gccacgctggtgctcagcattggtgagaccgtcgaggaagtcacggacagcgggttcttg
ggcaccacgcccactctctgctgcgccgcccttggggacgacgccctggtgcaggtctat
ccagacggcatccgtcacattcgctccgataagcgcgtcaacgagtggaaggcccccggc
aagaagtccatcaccaaatgtgccgtcaatcagcggcaggtggtcatcacgttgtctgga
cgggaactggtctactttgaaatggatccgactggcgagctaaatgagtacacagaacgc
tccgaaatgccggcagagatcatgtgcatggccctgggtacagtgcccgatggcgagcaa
cgctcatggttcttggccgtcggactggcggataacactgtgcgcatcctctcgttggat
ccgaacaactgcctgactccctgctccatgcaggccctgccttcgccggccgagtcgctt
tgcttggtggaaatgggtcacacggagagcacgaccagtgcgggagccctggatgacgat
gcaccaccacagcgcagtggcagcaacaagggcacaatctatctgaacattggcctgagc
aacggagtgctgcttcggacagtactcgacccggtctctggcgatctggcagatacgcga
acgcgttacctgggctctcgtcccgtgaaactgttccgcatcaagatgcagggcgccgaa
gcagtactggccatgtcgagtcgctcctggctgtcgtattaccatcagaatcgattccat
ttgacgccgctctcctacgagacactggaatatgcctcgggcttctccagcgagcagtgc
agcgagggcattgtggcgatctcaacgaacaccttgcgcatcttggccctggagaagctg
ggagctgtcttcaatcaagtggcgtttcccctgcagttcacgccgcgcacattcgtcatt
catccggacactgggcgcatgctgatcgccgagacggaccacaatgcctacacggaggac
acgaagagtgctcgcaaggagcagatggccgaggagatgcgcagtgctgctggcgacgag
gaacgcgaactggccagagagatggcgaatgccttcatcaatgaagtgctgcccgaagat
gttttctcggcccccaaggcagggctgggtctgtgggcctcacagatccgctgcctggac
gccatgcatggccagacgatgttcagtgtgtcgctgacccagaacgaggccatcatgtcg
atggccatggtcaagttctcggtggcagccgatggtcgctactatctggccgttggcatt
gccagggatcttcagttgaatccgagaatatcccagggcggctgcctggacatctacaag
atcgatcccacgtgctccagcctggagttcatgcatcgcacagagatcgatgagatccct
ggcgcactgtgcggcttccagggtcgcctgctggccggatgtggccgaatgctgcgcatc
tatgatctcggaaagaagaaaatgctccgaaagtgcgagaacaaacacattccctatcag
atcgtcaacatccaggcgatgggtcatcgcgtctacgtttcggatgtccaggagtcggtc
ttcttcctgcgctaccgtcgggcggagaaccagctcatcatctttgccgatgacacgcat
ccccgatgggtgacggccaccacactgctggactacgacaccattgccatcgctgacaag
tttggcaatttgagtattcagcgcctaccccattccgtgactgacgacgtggacgaggac
cccaccggcaccaagtcgctgtgggatcgtggactcctctcaggtgcctcccaaaagtcg
gagaacatctgctccttccacgtgggcgagatcatcatgtcgctgcagaaggccaccctc
attcctggtgggtcggaggctctcatctattcgacgctcaacggaactgttggtgccttt
gtgccgttcaccagtcgcgaggactacgacttcttccagcacctggagatgcacatgcgc
aacgagaatcctccgctatgcggccgcgaccatctcagctaccgcagctcctactatccc
gtgaagaatgtgctcgatggcgacctgtgcgagcagtacctctccattgaggcggccaag
cagaagagcattgccggggacatgttccgcaccccgaatcagatctgcaagaagctcgag
gacatacgcacgcgatatgccttctaa
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integrated database retrieval system
