Drosophila pseudoobscura: 4812878
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Entry
4812878 CDS
T01032
Name
(RefSeq) nuclear valosin-containing protein-like isoform X1
KO
K14571
ribosome biogenesis ATPase
Organism
dpo
Drosophila pseudoobscura
Pathway
dpo03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
dpo00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
4812878
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
dpo03009
]
4812878
Ribosome biogenesis [BR:
dpo03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
4812878
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
AAA_lid_3
Nucleolin_bd
AAA_5
RuvB_N
AAA_16
AAA_22
AAA_33
nSTAND3
AAA_14
NPHP3_N
TIP49
AAA_28
RNA_helicase
Rad17
Mg_chelatase
ABC_tran
NACHT
AAA_18
AAA_17
TsaE
IstB_IS21
AAA_2
ATPase
Vps4_C
Viral_helicase1
NB-ARC
Sigma54_activ_2
Parvo_NS1
AAA_11
Motif
Other DBs
NCBI-GeneID:
4812878
NCBI-ProteinID:
XP_001353233
UniProt:
A0A6I8UCA6
LinkDB
All DBs
Position
X:43881299..43885118
Genome browser
AA seq
968 aa
AA seq
DB search
MKKSKPLLHDHLITIRVKKYLEEHIGETYLDVKLMTKELMSKYPEYSRRKFGPFRQLVHQ
AFTIISDSYNLDKVSSSEEECPSEESEPPTNSLMNNMMNSLYSQQTKPQAPKSIPEPIDI
SSGDEIEDDSPSSTANGEAPQAPPPPVINSNSLKRLMGDMPETKLPGPKKVAKLNLNIIQ
GPGKDPAQKFHSGSGGTGKNHSDVRSRKDQRNPPMLYKQQRQQNQSPSDRHSGRSRNYRK
DLELQQMTESFRDLGGMDSTLKELCEMLIHIKSPEFYFQLGLLPSRGLLLHGPPGCGKTF
LARAISGQLKMPLLEVPATELIGGISGESEQRIRDVFEHAMDFSPCVLFIDEIDAIAGNR
QWAAKDMERRIVSQLISSMDNLKATEFGQSVIVIAATTRPDVIDPALRRIGRLDHEIALH
IPSRKERREILRIQCESLSVDPKLNYDKIAELTPGYVGGDLMALVCRSAAVAVKRRSMKK
FRELHVASEKNMATVELDDDETNDETVLGGKAEAKTEGAKADGAKDVEETSGDKSDKDKS
DGENLNKSDSDNAEKGAEGATNGKTPGKPSNAAMDVDENEEKPLTDEKKASDNDYYEPTL
AELTNFLDNPPEEFYDPNFCVTLADFMAAIKVTQPSAKREGFITVPDTTWEDIGALQDIR
DELKLAVLAPVKYPEKLERLGLTAPSGVLLCGPPGCGKTLLAKAIANEAGINFISVKGPE
LMNMYVGESERAVRSCFQRARNSAPCVIFFDEFDSLCPKRSEGGDGNNSGTRIVNQLLTE
MDGVEERKGVYILAATNRPDIIDPAILRPGRLDTILYVGLPEQNERAEILKASTKNGTRP
VMADDVDLDDLAAQTEGYTGADLAGLVKQASMYALRQALAEDDDNLDGLCVRRQHFKDAL
QQLRPSVSEQDRKVYEKLRQKYAAPRLPAFDAKNPINIKRKAKNFCKETNMLRPTHPIQT
IDYSDKTN
NT seq
2907 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaatccaagccactgcttcacgaccatctgattacgattcgagtgaaaaagtat
ctcgaggagcacattggcgagacctatctggatgtgaaattgatgaccaaggagttgatg
agcaaatatccagagtattcgcgtcgcaagttcggaccatttagacagcttgtgcatcaa
gcatttaccattatctcagacagctataatttggacaaggttagcagctcggaggaagag
tgcccaagcgaggagtccgagccccctactaacagtttgatgaacaacatgatgaatagc
ctgtacagtcagcagacgaagccacaggcccccaagtcgatccctgagcccattgacata
tccagtggcgatgaaatcgaggatgattcgccctcctctaccgcaaacggcgaagcgccc
caggccccgccaccgccagtaatcaacagcaattcactgaaacgcctgatgggagatatg
ccggaaaccaagctcccggggccaaaaaaagtagctaagttaaatctaaatatcattcaa
gggcctggcaaagacccagcacagaaattccattcaggttcaggtggcactggcaagaac
cactctgatgtccgctcacgcaaagatcagcgtaatccgccaatgctctacaagcaacag
cgacagcaaaatcagtccccatcggaccgccattcgggacgctcgcgcaattacagaaag
gatctggagttgcagcaaatgactgaaagtttccgtgaccttggcggcatggatagcaca
ctgaaggagctttgcgaaatgctcatacacatcaagtcgccagaattctatttccaatta
gggctgctgccctcaaggggtttgctgttgcatggtcctccgggatgtggcaaaaccttt
ctggctcgtgccattagtgggcaattgaaaatgcccctgctggaagtgccggccacagag
ctcattggtggcatctctggggagtctgagcagcgcatacgcgacgtttttgagcatgcc
atggatttttcgccctgtgtgctcttcatcgatgagattgatgccatcgctggcaatcgc
cagtgggccgccaaggacatggagcgtcgcattgtctcacagctgattagcagcatggat
aacttgaaggccacagaattcggccagtctgtgatcgttattgcggccaccacgcgtccc
gatgtcatcgaccccgctctgcgtcgcattggccgccttgatcatgaaatcgccttacac
ataccatcgcgcaaggagcgacgggagatcttgcgcatacaatgcgagtctctgtccgtc
gacccgaagctcaactacgacaagattgcggagctgacgcccggctatgtgggcggcgat
ttgatggcactggtctgccgttccgccgccgttgccgtcaagcgccggtcgatgaagaag
ttccgtgagctacacgtggccagcgagaagaacatggccacagtcgagctggacgatgat
gaaaccaatgacgagactgttttaggcggcaaggccgaagcaaagacagaaggggccaag
gccgatggcgccaaagacgtggaggagacatccggagacaagagcgataaagacaagtcg
gacggggagaatcttaataaatccgatagcgacaatgcagagaaaggtgccgaaggagct
accaacggaaagacgcctggcaaaccttcaaacgctgccatggatgtggatgagaatgaa
gagaagccactgacagacgagaagaaggcttccgacaatgattactacgagcccacactg
gccgagctgaccaactttctggacaatccgccagaagagttctacgatcccaatttctgt
gtcactttagctgacttcatggccgccattaaagtgacgcagccatcggccaagcgcgaa
ggatttatcaccgtgccagacaccacctgggaggatattggggcgctgcaggacatacgc
gatgagcttaagcttgcggtcctagctccggtcaagtatccggagaaactggagcgcctt
ggcttgactgcaccatctggcgtgctgctatgcggtccacctggttgtggcaagaccctg
ctggccaaagccatagccaatgaggcgggcatcaactttatttcggtgaagggcccagag
ctgatgaacatgtatgttggcgagagtgagcgtgctgtgcgctcctgcttccaacgggct
cgcaactcggctccctgcgtcatctttttcgatgagttcgactcgctgtgccccaaacga
tccgagggtggcgatggcaacaactcgggcacgcgcattgtcaaccagctgctcaccgaa
atggatggcgtggaggagcgcaaaggagtctacattctggctgcgaccaatagaccagac
attatcgatccggctattctgcgtcctggtcgcttggacactatactgtatgtgggactg
cccgagcagaatgaacgcgccgagattctgaaggcaagcaccaagaatggaacgcgtcct
gttatggccgatgatgtggatctagatgatttggctgcacaaaccgagggctataccggt
gccgatttggctgggctggtcaagcaggcctccatgtatgccttgcgccaggccctggct
gaggacgatgacaacctggacggcttgtgtgtgcgccgtcagcacttcaaggatgccttg
cagcagctacgtccctcagtcagtgagcaggatcgcaaagtgtacgaaaaactgcgccag
aagtatgccgcacctcggctgccagcgttcgatgctaaaaacccaatcaatattaagaga
aaggcaaagaatttctgtaaagaaacgaatatgttacgacccacacatcccattcaaacg
attgattattcagacaaaactaattaa
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