Drosophila pseudoobscura: 4812910
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Entry
4812910 CDS
T01032
Name
(RefSeq) general transcription factor IIH subunit 2
KO
K03142
transcription initiation factor TFIIH subunit 2
Organism
dpo
Drosophila pseudoobscura
Pathway
dpo03022
Basal transcription factors
dpo03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
dpo00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
4812910
09124 Replication and repair
03420 Nucleotide excision repair
4812910
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dpo03021
]
4812910
03400 DNA repair and recombination proteins [BR:
dpo03400
]
4812910
Transcription machinery [BR:
dpo03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
4812910
DNA repair and recombination proteins [BR:
dpo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
4812910
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ssl1
C1_4
VWA_2
VWA
Motif
Other DBs
NCBI-GeneID:
4812910
NCBI-ProteinID:
XP_015042798
UniProt:
Q2M0P7
LinkDB
All DBs
Position
X:complement(45530636..45532488)
Genome browser
AA seq
445 aa
AA seq
DB search
MADDDRDDQKEYRWETGYEKTWEAIKDDEDGLLDGAIADIIQKAKRQRQAQKTKQNRLGM
MRHLFIILDCSESMSVPDLKPTRLRCTIKLLDQFIEEFFDQNPISQMGIIALKAKRAEKI
TELTGTSRVHLKALEGLANVPLTSEPSLQNGLDLALKTLKVVPSHASREIVIVMGSLTTC
DPVDINLTIDELKKEGIRCSVISLSAEIHIARYLTQQTRGTFGAVLDDAHFRDQLMSQVD
PPPAAKTQHNSLIRMGFPHTKNEVEGKDAPLSMCMCHIENLEEPSELCTTGHHCPQCNSK
YCELPVECQSCGLTLVSAPHLARSYHHLFPVPNFEEIPFDSLPKASSDRGGTGTGTTECY
ACMKLFVPVADKTVFKCGFCKQFFCLDCDIFIHDTLHACVGCNTIPGVDGLVYQQSSKSV
SDSHHQAQAHDLHPGTSKQRGQFSI
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
atggctgatgacgaccgcgacgatcagaaggagtaccgctgggagacgggatatgagaag
acatgggaagccatcaaggacgacgaggatgggctgctggatggggcaatcgcggatatt
atccagaaggccaagcgtcagcggcaggcgcaaaagacgaaacagaatcgtctgggaatg
atgcgacatctattcatcatactcgactgctccgagtcaatgagcgtgcctgatctgaag
cccacgcgcctacgctgcaccatcaagctgctcgatcagttcatcgaagagttctttgac
cagaatcctattagccagatgggcattattgctctaaaggcgaagcgtgctgagaaaata
accgaattgaccggcacctcgcgtgtgcatctcaaggcattggaaggcctagcaaatgtg
cctttgaccagcgagccatcgctgcagaacggcttggatttggcattgaaaaccctcaaa
gttgttccatcgcatgcttcgcgggagattgtcatcgtgatgggctccctcaccacctgc
gatcccgtggacattaatctaactatcgatgagctgaagaaggagggtatacgctgttcg
gtaatctcattgtcggcagagattcatattgcccgctacctcacccaacagactaggggc
acattcggcgctgtcctggacgatgctcattttagggatcaactcatgtcccaggtggat
ccgccgcctgcggccaagactcagcacaattccctcatccgtatgggctttccgcacacc
aagaacgaggtggagggcaaggatgcaccgctctcgatgtgcatgtgccacatagagaat
ctggaggagcccagcgagctctgcaccaccggacaccactgtccacaatgcaatagcaag
tactgcgaactgcccgtggagtgtcagtcgtgtggtcttacgctagtctcggctccacat
cttgcccgctcgtaccatcatctgttccctgttcccaacttcgaggaaattccgttcgat
tctttgccgaaagcctcctcggaccgtggtgggaccggcaccgggaccacggaatgctac
gcttgcatgaaactcttcgtcccagtcgcagacaagactgttttcaagtgcggcttctgc
aagcagttcttctgcctcgattgtgatatcttcattcacgacaccctgcacgcctgtgtg
ggctgcaacaccataccaggcgtcgatggcctggtctatcagcagagctccaagtccgtc
tcggactctcaccaccaggcgcaggcgcacgatttgcacccaggaacgtccaagcaacgt
ggacagtttagcatataa
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integrated database retrieval system
