Drosophila pseudoobscura: 4812973
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Entry
4812973 CDS
T01032
Name
(RefSeq) general transcription factor IIH subunit 4
KO
K03144
transcription initiation factor TFIIH subunit 4
Organism
dpo
Drosophila pseudoobscura
Pathway
dpo03022
Basal transcription factors
dpo03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
dpo00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
4812973
09124 Replication and repair
03420 Nucleotide excision repair
4812973
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dpo03021
]
4812973
03400 DNA repair and recombination proteins [BR:
dpo03400
]
4812973
Transcription machinery [BR:
dpo03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
4812973
DNA repair and recombination proteins [BR:
dpo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
4812973
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tfb2
Tfb2_C
Helicase_C_3
Motif
Other DBs
NCBI-GeneID:
4812973
NCBI-ProteinID:
XP_001353141
UniProt:
A0A6I8UC55
LinkDB
All DBs
Position
X:42688270..42690072
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AA seq
496 aa
AA seq
DB search
MAMADTKSGRYASAGSSNSVVPLVQGPANLECKDFQEYLRTRQTAETLEKLYNYPPICLA
VFRELPELARQFIIRILFVDQPVPQAVVTSWGAQRFAKEQTEATSCLSDLNVWRVTAIPG
GLSAWELSPTFKKSVRQVLLGGGKPWPMTNTLEKDSKPRDIAFLDSYAMSRWRCVLHYMV
GTGNRNGTDAEAISPDAVRILLHANLMKRDERDGITITRQGFQFLLLDTRAQVWHFMLQY
LDTCEERGVSLPECLSMLFQLSFSTLGRDYSSEGMNSQMLSFLQHLREFGLVFQRKRKEG
RFYPTRLALNVTSKEAATTMTVSDEEAMQDSGYIVVETNYRVYAYTDSPLQVAVLGLFTE
LLYRFPNLVVGVLTRDSVRQALRGGITAEQIVSYLQQYAHPNMKLVESAIQSKSCLPPTV
VDQIKLWEMERNRFTYTEGVVYNQFLSQNDFVTLRDYAQSIHVLVWQNERTRTMVVQKHG
HDDVKRYWKKYSKGGG
NT seq
1491 nt
NT seq
+upstream
nt +downstream
nt
atggccatggccgacacaaaatctgggagatatgccagtgccggcagcagcaatagtgtt
gtgccccttgtgcaggggccggcgaatctggagtgcaaggatttccaggagtatcttcgc
actcgccagactgccgagacgctggagaaactatacaattatccgccgatttgcctagcc
gtgttccgggagctgcccgaactagccagacagttcattatacgaattttattcgtggat
cagccggtgccacaggctgtggttacctcctggggggcccagcgatttgccaaggagcaa
accgaggccaccagctgcctctcggatctaaatgtttggcgtgtgacggccataccaggc
ggcctgtctgcatgggagctgtcacccacattcaagaaaagcgttcgccaggttcttttg
ggcggcggcaagccgtggccgatgaccaatacactggagaaagactcgaagccacgtgac
atagccttcctggactcctatgccatgtcccgctggcgctgtgtgcttcattacatggtg
ggaacgggaaaccgtaatggcaccgatgcagaagcgatcagtccggatgctgtgaggatt
ctactccatgcaaatctcatgaagcgcgacgagcgagacggaattacaatcacccgccaa
gggtttcagttcctgctgctggacacacgtgcacaggtctggcatttcatgctccagtat
ttggatacatgcgaagagcggggagtatctcttccggagtgtctttccatgctgttccag
ctcagtttctccaccctcggtcgagactacagctcagagggcatgaacagccagatgttg
tccttcctgcagcatttgcgcgagtttggtttggttttccagcggaaacgcaaggagggc
cggttttatcccactcgtcttgccctaaacgtgaccagcaaggaagcggctaccacaatg
acagtgtcagacgaggaggccatgcaggacagtggctacattgtggtagagacaaactat
cgcgtctatgcctacacggattcccctcttcaagtggcggtcctgggcctgtttaccgag
ttgctctatcgctttcccaacttggtcgtgggcgtgctcacccgcgactctgtgcgtcag
gcattacgcggcggcatcactgcagaacagattgtctcctatctgcagcagtacgcccac
cccaacatgaaactagtggagtcggccatccagtcaaagtcctgcctgccgcccaccgtt
gtggatcaaatcaagctctgggagatggagcgcaaccggttcacatacacagagggagtg
gtatacaatcagtttctctcccagaacgatttcgtcactctgcgcgactatgcgcagtcg
atccatgtcttggtttggcagaatgagcgcactcgcaccatggtggtgcagaagcatggt
cacgacgatgtcaagcgctattggaagaagtattcgaagggtggcggttag
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