Drosophila pseudoobscura: 4813014
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Entry
4813014 CDS
T01032
Name
(RefSeq) exosome complex component MTR3
KO
K12587
exosome complex component MTR3
Organism
dpo
Drosophila pseudoobscura
Pathway
dpo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dpo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
4813014
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dpo03019
]
4813014
Messenger RNA biogenesis [BR:
dpo03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
4813014
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
7TMR-HDED
Motif
Other DBs
NCBI-GeneID:
4813014
NCBI-ProteinID:
XP_001354017
UniProt:
A0A6I8UE75
LinkDB
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Position
X:54496227..54497438
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AA seq
331 aa
AA seq
DB search
MLRVTQTKNALLDGATIAEDLYTTPKDCEEGFESLELPGKNPKKLSPRSTFLRAGVLTTV
RGSAYMEYGNTKVMAIVAPPHEMMRATARRMNMGVINCFVNFAAFATGELESVPEREKHL
GSMLSKALEPVVCRTEFLNFQLDIRVLILDDDGCLLSTAINCCGVALVECGISTYDLVTA
STACIYRDNVFLNPTAKEEELLRKHRGGHALAGSENSSSTSTGAPQEHGLITTASMDTFD
QLAQCQQCGYLSPGTYVKLLDYTLAINKSLRQIIRRVLTARIKEQHELDVREKAESALED
QRLAEIIERLGRQGLDEFIQSTIKEDPFVKR
NT seq
996 nt
NT seq
+upstream
nt +downstream
nt
atgttgagggtaacacaaacaaaaaacgccctgctggatggggccacaatagcagaagat
ctatacacaacaccaaaggactgcgaagagggcttcgagagcctcgagttgccgggcaag
aacccaaaaaaactgagcccacgttcaacattccttcgtgctggagttctgacaacagtt
cggggctccgcttacatggaatatggcaacacaaaagtcatggccattgtggcgcctcca
cacgagatgatgcgcgccaccgcccgccgcatgaacatgggcgtcatcaattgctttgtg
aactttgcggcctttgccaccggggagctggagtcggtgccggagcgcgaaaagcacctg
ggcagcatgttgtccaaggccctggagccagttgtctgccgcacagagttcctcaacttc
cagctggacatccgagtgctgatactggacgacgacggctgcctgctcagcacggccatc
aactgctgcggcgtggccctggttgagtgcggcatctccacctatgacctggtcacggcc
tccacggcgtgcatttatcgcgacaatgtgttcctcaaccccactgctaaggaggaggag
ctgctgcgtaagcatcggggaggccacgcgctggcaggcagtgaaaacagcagcagtacc
tcaaccggcgctccccaagagcacggccttatcaccactgccagcatggacacctttgat
cagctggcccagtgccagcagtgtggctatctcagtcccggcacttatgtaaaactgctc
gactacaccctcgccatcaacaagtcgctgcggcagataatacgtcgcgtcctcacggca
cgcatcaaggagcagcacgagctcgatgtccgcgagaaggccgagagcgccctggaagac
cagcgtttggcggagatcattgagagactcgggcggcagggcttggatgagtttatccaa
tccaccatcaaggaagatccatttgtcaagagataa
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