KEGG   Drosophila pseudoobscura: 4813741
Entry
4813741           CDS       T01032                                 
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp4
  KO
K12662  U4/U6 small nuclear ribonucleoprotein PRP4
Organism
dpo  Drosophila pseudoobscura
Pathway
dpo03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:dpo00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    4813741
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:dpo03041]
    4813741
Spliceosome [BR:dpo03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6 snRNP specific factors
    4813741
SSDB
Motif
Pfam: WD40_Prp19 WD40 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_EML_2 WDR55 EIF3I Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_2nd Beta-prop_WDR75_1st WD40_MABP1-WDR62_2nd WD40_MABP1-WDR62_1st Beta-prop_WDR90_POC16_2nd NBCH_WD40 ANAPC4_WD40 Beta-prop_TEP1_C Beta-prop_EML PRP4 Beta-prop_IFT122_1st Beta-prop_EIPR1 Beta-prop_SCAP Beta-prop_DCAF4 WDR90_beta-prop_4th Beta-prop_RIG_2nd Beta-prop_IFT140_1st MIOS_WD40 eIF2A Beta-prop_SPT8 Beta-prop_WDR19_1st WD40_like WD40_RFWD3 WD_LRWD1
Other DBs
NCBI-GeneID: 4813741
NCBI-ProteinID: XP_001353786
UniProt: A0A6I8UDP3
LinkDB
Position
X:51758658..51760733
AA seq 558 aa
MSDDDDIQYIKRQRTIHYGSLEETERKRQNAGGASSAANAATAASATTPSQTSGAAAATP
AAPAPPAQLEDIESDEDYEEPSKKVSSTKASLPPPTAASLANKINDDYFDLETEMERDKV
ALLEEFERKKRARQINVSTDDAEIKSNLRQLNEPICFFGEGPAERRRRLKELLANLGDNA
LNKKSEEEERKMQQREQEATWYHEGPETLRVSRLWLADYSLPRARDRLMRAQEALVVPSA
TRAGRMVEMQKKLQSLAPLCSQVGDTRPVSGVAFNEDSTLLLTSSWSGLCKLWSVPDCEL
KQTLRGHASYVGGVALRPGVKADEENVVAMASGGHDGAVKLWGFNNEESIADITGHMPHR
VSKVAFHPSGRFLATACYDSSWRLWDLEQKTEVLHQEGHAKPVHCLAYQSDGSVLVTGGL
DAFGRVWDLRTGRCIMFLEGHLGAVFGVDFSPNGFHIATGSQDNTCKIWDLRRRQPVYTI
PAHTNLIADVKYQQDCGSFLVTCSYDSTTKIWSNKTWQPLKTLQGHDNKVISVDISPNSQ
YIATTSFDRTFKLWSPDS
NT seq 1677 nt   +upstreamnt  +downstreamnt
atgtccgatgatgacgatatacaatacatcaaacggcagcgaaccatccactacggttcg
ctagaagagacggagcgcaagcggcaaaatgccggcggcgcgtcgtctgcagcaaatgcg
gcaacagccgcatcagccacaacgccgtcccaaacatcgggggcggctgcggccacacca
gcggcccctgcacctcctgcccagctggaggacatcgaatcggatgaggattacgaggag
cccagcaagaaggtaagcagcacaaaagccagcctcccacccccaacggcggcctcgttg
gccaacaaaatcaacgatgactactttgatcttgagactgagatggagcgcgataaggtg
gcgcttctggaggagttcgagcggaagaagagagcccgtcagattaacgtgtccacggac
gatgcggagatcaagagcaatctccgtcagctgaacgagcccatttgctttttcggcgag
ggtccggcggagaggcgacgccgtctcaaggagctactggccaatctcggcgacaatgca
ctcaacaagaagtcagaggaggaggagcgcaagatgcagcagcgcgaacaggaggccaca
tggtatcacgaaggacccgagacattgcgggtatcacgtctctggctggcggactactcg
ctgccgcgtgctcgcgatcgtctgatgcgagctcaagaagctctcgtcgtacccagtgcc
acgcgggctggtcgcatggtggagatgcaaaagaagcttcagtccttagctcctctctgc
tctcaagtgggcgacacgcggcccgtaagcggtgtcgccttcaacgaagactctacgctc
ctgctgacctcgtcgtggtcgggcctttgcaaactatggagcgtgcccgactgtgaacta
aagcagaccttgcgtggtcatgctagctatgttggaggagtggccttgcggccgggcgtc
aaggcagatgaggagaatgtggtggccatggcatccgggggccacgacggcgccgtcaag
ctgtggggcttcaacaacgaggaatcgattgccgacatcacaggccacatgccgcatcgc
gtttccaaggttgcgttccatccatccggacgctttctggccacagcctgctacgactcc
agttggcggctttgggatctagagcagaagactgaggtgctgcatcaggaggggcatgcc
aagccggtccactgtctggcctaccagtccgatggcagtgtactggttacaggcggcctc
gatgccttcgggcgcgtctgggatctacgcaccggacgctgtatcatgttcttagagggc
cacctgggcgccgtttttggggtggacttctcgcccaatggcttccacattgccaccggg
tcgcaggacaacacttgcaagatttgggatctgcgacgccgccagcccgtctacaccatt
cctgctcacaccaatcttattgcggatgtcaagtaccagcaggattgtggcagctttttg
gttacctgctcctacgactcgaccaccaagatctggtcgaataagacgtggcagccgctc
aagactctccagggccacgacaacaaggtcatctccgtggatatatcgcccaattcgcag
tatatagccaccacatcattcgatcgcacctttaaactctggtcgcccgatagctga

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