Drosophila pseudoobscura: 4814098
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Entry
4814098 CDS
T01032
Name
(RefSeq) vacuolar protein sorting-associated protein 8 homolog
KO
K20178
vacuolar protein sorting-associated protein 8
Organism
dpo
Drosophila pseudoobscura
Pathway
dpo04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
dpo00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
4814098
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
dpo04131
]
4814098
Membrane trafficking [BR:
dpo04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
4814098
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_VPS8
TPR_Vps8
VPS8_N
TPR_Vps41
Beta-prop_EML_2
ANAPC4_WD40
WD40_CDC20-Fz
zf-RING_2
Clathrin
Beta-prop_WDR90_POC16_2nd
zf-RING_5
Beta-prop_HPS5
WDR90_beta-prop_4th
Herpes_UL37_1
zf-RING_11
WD40
Prok-RING_1
Motif
Other DBs
NCBI-GeneID:
4814098
NCBI-ProteinID:
XP_001354229
UniProt:
A0A6I8UEH7
LinkDB
All DBs
Position
X:66673854..66677975
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AA seq
1239 aa
AA seq
DB search
MSELKAPSLQSLLESDRGSTDSLLAESLQLDFEDLDDAEFAIPPTDVLPTLEAVLSEFEA
DSDVASELGMPVPHATPTPSIGEDSALRGDGRSGGGSIMRYTLLHGISAQLSSAGERVNA
GAASACAVAAYIAVGTSHGHILNFDVTQTLRWAHQDKHGHGAVSSLAFNADSTRLLAGYA
RGLVAMLDTHTGDVLRELFDVITPNTGVLHVKWTSRSSLALCADAGGSVWSLSFTRKLGI
RGCSSRCLFSGARGEVCAVEPLIMDSQGRHDLDQYCIVALATLSKYFIVTVRPRLRVIKY
HVLQGPPDCLPLLAWHLVLIQAADTSRSVDPVIVVGRGNQLFFHQLFVSNGRITLLYLRH
VQLHGSLLSAHWLGPKCVASLDTSEILHLVDVRSSKELECMDMANAGLVYGSAQFKGLAT
GGNVSPAFALAGSNACYNSVVSRGTQLYVLGARSLHIIGVRTWSERISYLVKHHRWQEAC
QLALDGYVASVDRPRKRAQAKERIIMLFREYIANSARAPDYCLGSIVNCMITIGELELLW
TQLWEKLQGNSTELFLQHISEHIEKETIHSINPVISQALVDYWLERSPAKLEKLILKLDW
MCLDLNQVLKAVKRHRLYRAQIYLNTQALNDYTAALTELLPLVTSQETDLGNCLLVYVSS
CLAGRGYPTGDIPVEQVHQVKNDVLRCLTSQHSKAGHEEEEPPYPYLRALLKFDTRETLN
VISLAFQEREFSNELGFSHRKRIIYLLLEIMTPENATWAEIGCLLNFIAQQISMQCLPRD
RHLLQRVLSHLAQEHIDNESSRQHSERESAWHELLSSNCLADISTDEEQLALAERARCYY
VVEYLLEKLQRYDNILDCYIQNESRHETMFAYMERHVSVPERCIYPQLKRHLRQLLAINA
KETTRLLALHYPERIMELLENLLKEEALLFCFLKCLNERQCELDAEQMELLLELFCKLET
PAAVTEFLANNSGYRLEQAIAIAQRHRLNRAVIYLYEKQESYAKAFELSMDLLRDAVGEQ
AVEEARQICALLARSVGTLPPQELERCWFSLLQYILPHQQLQAITKSMLHEASQHIDLHN
LVQLIMNTPHNVNSSFGDIKDLLMGMLDSSRHQTEALRTGAEVLCQDLHMEFVKQQRLAR
RGLWITSTKCCICRQRLSNHTQILVMGGCGHALHEECLEECPQVPVEECPRCFAQIPVGD
DGQTSSCLRLPRTNRRLFSPSSAMEMGALQLKAPPRRFC
NT seq
3720 nt
NT seq
+upstream
nt +downstream
nt
atgtccgagttgaaggcaccgtcactgcagtcgctgctggagtcggatcgcggctccacc
gacagcctgctggccgaatctttacagctcgactttgaggacctggacgatgcagagttt
gccattccgcccaccgacgtcctgcccaccctggaggcggtgctcagcgaatttgaggcc
gattcggacgttgcctcagagctggggatgccggtgccccatgccactcccaccccctcg
ataggggaggatagcgctctccgtggcgacggccgcagcggcggaggctccatcatgcga
tacaccctcctccatggcatatcagcccaactgtcgtccgcgggggagcgagtgaacgct
ggagcggccagcgcctgtgccgtggccgcctacatagccgtgggcacctcacacggccac
atcctgaacttcgatgtgacccagacgctgcggtgggcccaccaggacaagcacggccac
ggagccgtctccagcctcgcattcaacgcggattccacgcgtctactggctggctatgcc
cgcggcttggtcgccatgctggacacgcacacaggggatgttctgcgagagctcttcgat
gtgattaccccaaatactggagtcctgcacgtaaagtggacatcgcgctcatccctggcg
ctctgcgcggatgcgggaggatctgtttggtcgctgagtttcactcgaaagctggggatc
cgcggctgcagctcccggtgcctcttctctggagcccgtggtgaggtctgtgccgtggag
cctctcatcatggactcccaggggcggcatgacctcgatcagtattgcatcgtggctctg
gcgacgctctccaagtactttatcgtcacagtccgaccgcgtcttcgtgtgatcaaatat
catgtcctgcaggggcctcccgactgcctgccactcctcgcctggcacctggtgctcatc
caagcggcggacacctctcgctcggtggatcccgtcatcgttgtgggtcgcggaaatcag
ctcttcttccaccagctcttcgtgtcgaatgggcggatcacgctgctctacctacgacac
gtacagctccacggaagccttctctccgcccattggctcggacccaagtgcgtggcatcg
ctggacacctcggagattctgcatctggtggatgtgcgctccagcaaggagctcgagtgc
atggatatggccaatgcaggactcgtttacggctcggcgcagttcaagggactggccacg
gggggaaatgtctctcctgcgttcgccctggccggcagcaatgcctgctacaattccgta
gtgtcgcgcggcacgcagctgtatgtcctgggcgcccgttccctgcacatcattggcgtg
cggacgtggtcggagaggattagctacttggtgaagcaccatcgatggcaggaggcctgc
cagttggccctcgatggctacgttgcctccgtggatcgtccccgaaagcgggcccaagcc
aaagagcgcatcataatgctgttcagggaatacatagccaactcggcgcgggcccccgac
tattgcctgggatccatagtcaattgtatgatcaccatcggggaactggagctcctgtgg
acacagctctgggagaagctgcagggcaacagcacggagctctttctgcagcacatctcg
gagcacatcgaaaaggagaccatacacagcattaatccggtgatatcgcaggccctggtc
gattactggctggagcgctcccccgcgaagctggagaagctcatcctaaagctggactgg
atgtgcctggacctcaatcaggtgctgaaggcagtgaagcggcaccgcttgtaccgcgca
cagatctacctcaacacgcaggccctcaatgactacactgcagcgctgacggagctcctg
ccactggtcacgtcccaggagacggatttggggaactgtctgttggtctacgtttccagc
tgcctcgctggcaggggctatcccaccggggacattcccgtggagcaggtgcatcaggtg
aagaacgacgtcctgaggtgtcttacctcgcagcattccaaagcgggtcacgaggaagag
gagccgccgtatccctatctgcgggctctcttgaagttcgacacgcgggagaccctaaat
gtcatttcgctggcctttcaggagcgggagttcagcaacgagctgggcttctcccaccgc
aagaggatcatttatttgctgctggagatcatgacgcccgaaaatgccacatgggcggaa
attggctgccttctgaacttcattgcccaacaaatctccatgcaatgcttgccgcgagac
aggcatctcttgcagcgcgtcctcagccacttggcccaggagcatatcgacaatgagagc
agtcgccagcactcggagcgggagagtgcctggcatgagctcctgtcgagcaactgcctg
gcggacatcagcaccgacgaggagcagctggctctggcagagcgtgcccgatgctactat
gtggtggagtatctcctggagaagctgcagcggtacgacaacatcctcgattgctacatc
cagaatgagtccaggcacgagacgatgttcgcgtatatggaacgacatgtgtctgtccca
gagagatgcatttatccgcaattgaagcgacatcttcgacagctgctggcgatcaatgcc
aaggaaacaacgcggctgctagccctgcactacccggagaggattatggagctgctggag
aacctcctgaaggaggaagctctgcttttctgcttcttaaagtgcctcaatgagcgtcag
tgtgagctggatgccgaacagatggagttgctcctggaactcttttgcaaactggaaaca
cccgcggccgtgacggaatttctagccaacaactccggctatcgcctggagcaagccatt
gccattgcacagcgccatcgacttaatagagctgtgatctacctctacgagaagcaggag
agctatgcgaaagcctttgagctctccatggatctgctgagggatgcggtcggcgagcag
gcggtggaggaggcgcggcagatctgcgctctgctcgcccgatccgttggaacgctgccc
ccgcaggagctggagcgctgctggttctcgctgttgcaatacattctgccccaccagcag
ctacaggccatcacgaaatccatgctgcacgaggcctcgcagcacatcgatctgcacaat
ctcgtgcagctgatcatgaacacgccccacaacgtgaacagcagctttggggacatcaag
gatctgctgatgggaatgctggacagttcgcggcatcaaacggaggcacttcgcactggt
gcagaggttctgtgccaggacttgcatatggagtttgtgaagcagcagcgcttggcacgg
cgtggcttgtggataaccagcaccaaatgctgcatctgccgtcagcggctgtccaaccat
acgcagatcctcgtgatgggcggctgtggtcacgccttgcacgaggaatgcctggaggag
tgcccccaagtgccagtggaagagtgtccgcgttgctttgcgcagattccagtaggagac
gatggacaaacgagcagctgcctgcggctgccacgaaccaatcgccggctgttttcccca
tcttcggccatggagatgggtgctctgcagctgaaggccccgcccagacgtttctgttag
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