Drosophila pseudoobscura: 4814900
Help
Entry
4814900 CDS
T01032
Name
(RefSeq) transcription elongation factor SPT6
KO
K11292
transcription elongation factor SPT6
Organism
dpo
Drosophila pseudoobscura
Brite
KEGG Orthology (KO) [BR:
dpo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dpo03021
]
4814900
03036 Chromosome and associated proteins [BR:
dpo03036
]
4814900
Transcription machinery [BR:
dpo03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
4814900
Chromosome and associated proteins [BR:
dpo03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
4814900
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SH2_2
YqgF
HHH_7
HTH_44
SPT6_acidic
S1
Tex_central_region
HHH_3
HHH_9
Tex_YqgF
Spt6_S1
Tex_N
OB_RRP5_4th
S1_RRP5
Nterm_IS4
Motif
Other DBs
NCBI-GeneID:
4814900
NCBI-ProteinID:
XP_001355099
UniProt:
A0A6I8UGF9
LinkDB
All DBs
Position
X:complement(7597639..7605021)
Genome browser
AA seq
1857 aa
AA seq
DB search
MAEFLDSEAEESEEEEELELNERKKLKKLKAVVSDSSEEEEDDEERLREELKDLIDDRPI
EEEDGSGDSDTASGGDDDDEGGGSGKKRKKHQDDDLDDRLEDDDYDLIEENLGVKVERRK
RFKRLRRIHDNESDGEEQHVDEGLAREQIAEQLFDENDESIEHRSERSPRHGEADAFDEE
DSESDADDFIVDDNGRPIADKKKKRRPIFTDASLQEGQDIFGVDFDYDDFSKYEEDEYED
DTEGDEYDEDMVGGDDHRVKKKKALKKKVAKKTIFDIYEPSELKRGHFTDLDNEIRKTDI
PERMQLRQVPVTPVPEGSLELDDEAEWIYQYAFCKSTVSEQQKADSREKMRKPPTTVKKI
KQTLEFIRNQQLEVPFIAFYRKEYVKPELNIDDLWKVYYFDERWCQLNERKRKLKALFEK
MRQFQLDTLCADPDKPIPDDVRLMLDSDFERLNDVQSMEELKDVHMYFLLNYSHELPKMQ
AEQRRKLLQERRDDRARRKAAAAENGDDLDTVPVEVDDDDDPELLLQDEQLKQAPNSSPY
AVFRKAGICGFAKHFGLTPEQFAENLRDNYQRNEVTQESLGPLELAKQYLSPRFMTTEEV
MHAAKYVVARQLAQEPLLRKTMREVYFDRARIDIRPTKNGMVLIDENSPVYSMKYVAKKP
VGDLFGDQFIKLLMAEEEKLLEITFLEEFEGNANANGPPGDYVEEAKALYNLDQFSKHVL
EWNALRAECVQLALQKWVIPDLIKELRATLHEEAQQFVLRSCTAKLYKWLKVAPYKPELP
QDYKYDDWSTLRGIRVLGLAYDPDHSVAAFCAVTTVEGDISDYLRLPNILKRKSSHNAEE
KGQKLADLRKLSEFIKMKKPHIVVIGAESRDAQMIQTDIKEILKELETTEQFPPIEVEII
DNELAKIYANSKKGESDFKEYPPQLKQAVSLARKMQDPLVEYSQLCDADDEILCLRYHPL
QERVPRDMLLEYLSLEFINRTSEVGLDINMMVQNSRTVNLLQYTCGLGPRKGQALLKLLK
QSNQRLENRTQLVTVCHLGPKVFINCSGFIKIDTSSLGDSTEAYVEVLDGSRVHPETYEW
ARKMAIDAMEYDDEETNPAGALEEILESPERLKDLDLDAFAVELERQGFGSKSITLYDIR
NELSCLYKDYRSPFQKPSAEELFDLLTKETPDSFYVGKCVTAMVTGFTYRRPQGEQLDNA
NPVRNETTGSWQCPFCHKDDFPELSEVWNHFDANSCPGQASGVRVRLDNGLPGFIHIKNL
SDKQVRNPEERVRVAQMIHVRIIKIDIDRFSVDCSSKTADLKDVNNEWRPRRDAFYDFVT
EELDNRKVTDAKAKALKRKTYARRVIAHPCFFNKSYAEVIAMLAEADQGEVAMRPSSKSA
AHLTATWKVADDIYQHIDVREEGKENDYSLGRSLWIGTEEFEDLDEIIARYINPMACAAR
ELIQYKYYKNNATPANGNEREFMEQLLRDEKAKDPKKIHYFFTASKTIPGKFLLSYLPKT
KARTEYVTVMPEGYRFRGQVFDSVNSLLRWFKEHWLDPTASPAMNTPMHGMRPPSAILNS
GGGGSSAGPYSITGSIAGSVSGGTPRSGISSADIRGSGGGGSSAYSISHSIGGGGGGGYG
SSAAAAAAHYGSSATPSFGGAAVNTPYTPSSQTPFMTPYTPHASQTPRYGHNVPSPSSQS
SSSQQMRHHHGHYGSGSGGTPRNYYDMGGAAAGGGYGIGQPPQQQHQQQRAKESLDWQLA
NDSWARRRPPQQQQQQQQQPQQQQQQSQQTSMGMGMNMGLGMGMGLGINLGYSVSGTTPT
NEYSTGNRNVAAGAGAGAGAGAAISSSKAASVRSTPRTNTSPHSMNLGDSTPLYDEN
NT seq
5574 nt
NT seq
+upstream
nt +downstream
nt
atggccgaatttctggactctgaggccgaggaatcggaggaggaggaggaattggaacta
aacgaaaggaaaaagctgaagaagctgaaagccgttgtatctgacagcagtgaggaggag
gaagatgacgaagaacgtctacgtgaggagcttaaagatttaatagatgacagacccatt
gaggaggaggatggcagcggcgattcggacactgccagcggcggcgacgatgatgacgaa
ggcggcggcagtggcaagaagcgaaagaaacatcaggatgatgatctagacgatcgactc
gaggacgatgattatgatctgatcgaggagaatctgggggtcaaggttgagcgacgtaaa
cgcttcaagcgtctgagacgcattcacgacaatgaaagcgatggcgaggagcagcatgtg
gacgagggtttggctcgtgaacagattgccgagcagttgttcgatgaaaacgatgagagc
attgagcatcgcagcgagcgcagccctcggcacggcgaggcggatgccttcgacgaggag
gattctgagtcagatgctgatgattttattgtggacgacaatggccgtcccattgccgac
aaaaagaagaaaaggcgtcccatattcacagatgcatcgctgcaagagggccaggatata
tttggtgtggactttgactatgacgacttctccaaatacgaggaggatgagtacgaggac
gataccgagggcgatgagtacgacgaggatatggtcggcggcgatgatcatcgggtgaaa
aagaagaaggccctcaaaaaaaaggttgccaagaagacaatcttcgacatttacgaaccg
agcgagctgaagcgcggccactttaccgatctggacaatgagatacgaaaaacagacata
cccgagcgcatgcagctgcgacaggtgcccgtaacgcccgtgcccgagggttcgctcgag
ctggacgacgaggccgaatggatctatcagtatgcgttctgcaagagcacagtctccgag
cagcagaaggccgacagtcgggagaagatgcgcaagccgcccacgaccgtgaagaagatc
aagcaaacgctcgagttcatacgtaatcagcagctggaggtgccgttcattgccttctat
cggaaggagtatgtcaagcccgaactgaatatcgatgatctgtggaaggtctactacttt
gatgagcgctggtgtcagctgaacgagcgcaagcggaagctgaaggcgctcttcgagaag
atgcggcagttccagctggacacgctctgtgcggatccggataagcccatacccgacgat
gtgcggctcatgctggacagcgactttgagcggctcaacgatgtccagtccatggaggag
ctgaaggatgtgcacatgtactttttgctcaactactcacacgagctgcccaaaatgcag
gccgaacagcggcggaaactgctgcaggagcggcgtgatgatcgcgccaggcgaaaggca
gccgccgccgagaatggcgacgatttggacactgtgcccgtcgaagtggacgacgacgat
gatccggaactgttgctgcaggacgaacagctgaagcaggcgcccaacagcagtccctac
gcggtgttccgcaaggcagggatctgcggctttgccaaacatttcggcctcacgcccgaa
cagttcgcagaaaacctgcgcgacaattatcagcgaaacgaggtcacccaggagagcctg
ggacccttggagctggccaagcagtatctctcgccgcggttcatgaccaccgaagaggtg
atgcatgccgccaagtatgtggtggcccgacagctagcccaagagccactgctgcgcaag
accatgcgtgaggtgtactttgacagggcgcgcatcgacatacgacccacgaagaacggc
atggtgctgattgacgagaactcgccggtttattcgatgaaatatgtggccaagaagccg
gtgggcgatctctttggcgatcagttcatcaagctgctgatggccgaggaggagaaactg
ctggagatcaccttcctcgaggagttcgagggcaatgccaatgccaatggcccgcccggc
gactatgtggaggaggccaaggccctctacaatctcgatcagttctccaagcatgtcctc
gagtggaatgccctgcgggcggagtgcgtccagctggccctgcagaagtgggtgatcccg
gacctcatcaaagagctgagggccaccctccacgaggaggcgcaacagtttgtgctgcgc
tcctgcaccgccaagctgtacaaatggctgaaggtggccccgtacaagccggagctgcca
caggactacaaatacgatgactggagcacactgaggggcatccgagtgctgggcctggcc
tacgatccggaccattcggtggccgccttctgtgcggtgaccaccgttgagggggatatc
tccgattatttgcgtctgccgaacatcctcaagcgcaagagctcccacaacgcggaggag
aagggccagaagctcgcggatctccgaaagctgtccgaattcatcaaaatgaagaagccc
cacattgtggtgatcggcgcggagtcgcgggacgcccagatgatccagacggacatcaag
gagatactgaaggagctggagaccaccgaacagtttccgcccatcgaggtggagatcatc
gacaacgaactggccaaaatctacgccaactcgaagaagggcgaatcggacttcaaggag
tacccgccacagctgaagcaggccgtttcgctggcccgcaaaatgcaggatccactggtg
gagtactcgcagctgtgcgatgccgacgacgagatcttgtgcctgcgctatcatccgctg
caggagcgtgtgcctcgcgacatgctgctggagtatctcagcctggagtttatcaatcgg
acgagcgaggtgggcctggacataaacatgatggtccagaactcgcgcaccgtcaatctg
ctgcagtacacctgcggcctggggccgcgcaagggccaggcgctgctgaagctcctgaag
cagagcaaccagcggctggagaatcgcacccagctggtcaccgtgtgccatttgggcccg
aaggtgtttatcaattgcagcggcttcatcaagatcgacaccagctcgctgggcgacagc
accgaggcgtatgtggaggtgctggatggctcgcgcgtccatccggagacgtacgagtgg
gcccgcaagatggccatcgatgcgatggagtacgatgatgaggagaccaatccggcgggc
gcactcgaggagatactcgagtcgccggaacgtctcaaggatctcgatctggacgcgttc
gccgtcgagctggagcgtcagggcttcggcagcaagagcatcacgctgtatgacatccgg
aacgaattgagttgcctgtacaaggactaccgctcacccttccagaagcccagcgccgag
gagctcttcgatctcctcaccaaggagacgcccgactccttttacgtgggcaaatgcgtg
acggccatggtcacgggctttacctatcgccggccccagggcgagcagctggacaatgcc
aatcccgtgcgtaatgagaccacgggcagctggcagtgccccttctgccacaaggatgac
tttcccgagctctcggaggtgtggaatcatttcgatgccaactcctgtcccggccaggcg
tcgggtgtgcgtgtgcggctggacaacggcctgcccggcttcatacacatcaagaatctg
tccgacaagcaggtgcgcaatcccgaggagcgcgtccgcgtcgcccagatgatccacgtg
cggataatcaagatcgacattgatcgcttctccgtcgactgctcctcaaagacagcggac
ctcaaggacgtcaacaacgaatggcggccgcgacgcgacgccttctacgatttcgtgacc
gaagagctggacaatcgcaaggtgacggacgccaaggccaaggcactcaagcggaagacc
tatgcgcgacgtgtgattgcccatccgtgtttcttcaacaagtcgtatgcggaggtcatt
gccatgctggcggaggccgatcagggcgaggtggccatgcgacccagcagcaagtcggcg
gcccatttgacggccacatggaaggtggccgacgacatctaccagcacatcgatgtgcgg
gaggagggcaaggagaacgactacagtctggggcgcagcctctggatcggcaccgaggag
tttgaagatctcgacgagattattgcccgctacatcaatcccatggcttgcgcggcccgt
gagctcatccaatacaagtactataagaataatgcaacgccagcgaacggcaatgagcgg
gaattcatggagcagctgctgcgcgacgagaaggccaaggatccgaagaagatccattac
tttttcaccgcctcgaagaccataccgggcaaattcctgctctcgtatctgcccaagaca
aaggcgcgcaccgagtatgtgacggtgatgcccgagggctatcgctttcgcggccaggtc
ttcgattccgtcaacagtctgttgcgctggttcaaggagcactggctggatcccaccgcc
tcgccggcaatgaatactccgatgcatggcatgcgaccgccttcggcaattctcaactct
ggcggaggaggatcctcggcggggccctacagcataacggggagcattgcgggcagcgtt
tcagggggtacaccgcgcagcggcatcagcagcgcggacatccgtggcagtggcggtggc
ggctccagtgcctactccatttcgcattccattggtggtggaggtggtggtggctacggc
tcctccgccgcagcggccgctgcccactatggcagctcagcgacgccctcgtttggcggc
gccgcagtcaacaccccctatacgcccagcagccagacgcccttcatgacgccgtacacg
ccgcatgcctcacagacgccacgctatggccacaatgtaccgagccccagttcgcagtca
tcgagcagccagcagatgcggcatcaccatggacactacgggagtgggagtggcggaacc
ccaaggaactattatgatatggggggtgctgctgctggaggtggctacggcattggccaa
ccgccacagcagcaacatcagcagcaacgtgccaaagagagcctcgactggcagctggcc
aacgattcctgggctcgacgaaggcccccgcaacaacagcaacagcagcagcagcaacca
cagcagcagcagcagcagtcacagcaaacgtccatgggaatgggcatgaatatgggtttg
ggtatgggtatgggtctaggaataaacctcggttacagcgtctccggcacgacgcccacg
aacgagtactcgacaggcaacaggaacgttgccgctggtgctggtgctggtgccggtgcc
ggtgccgccatatcctcgtccaaagcagcatcggtgcgtagcacgccgcgcacaaatacc
tcgccgcactccatgaatctgggcgactcgacgccgctctacgatgagaactaa
DBGET
integrated database retrieval system
