Drosophila pseudoobscura: 4815478
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Entry
4815478 CDS
T01032
Name
(RefSeq) CCR4-NOT transcription complex subunit 9
KO
K12606
CCR4-NOT transcription complex subunit 9
Organism
dpo
Drosophila pseudoobscura
Pathway
dpo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dpo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
4815478
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dpo03019
]
4815478
Messenger RNA biogenesis [BR:
dpo03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
4815478
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rcd1
Motif
Other DBs
NCBI-GeneID:
4815478
NCBI-ProteinID:
XP_001355498
UniProt:
Q29IU6
LinkDB
All DBs
Position
X:5108464..5110098
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AA seq
296 aa
AA seq
DB search
MSAQPSPCMNPQQQQSEQEKVYQWINELAHPDTRETALLELSKKRETDLAPMLWNSFGTA
CALLQEIVNIYPSITPPTLTAHQSNRVCNALALLQCVASHPETRTAFLQAQIPLYLYPFL
STTSKTRPFEYLRLTSLGVIGALVKTDEQEVITFLLTTEIVPLCLSIMDSGSELSKTVAT
FIIQKILLDESGLSYICQTYERFSHVAITLGKMVIQLAKEPCARLLKHVVRCYLRLSDNT
RARKALGQCLPDQLRDGTFALCLQDDKSTKQWLQMLLKNLELGNTPQQIGMSPLGS
NT seq
891 nt
NT seq
+upstream
nt +downstream
nt
atgagtgcgcagccaagtccctgcatgaatcctcagcagcagcaaagtgaacaagagaag
gtgtaccaatggatcaacgaattggcgcatccggacacgcgcgagaccgctctcctggag
ctgagcaagaagcgtgaaactgacctggctcctatgttgtggaacagttttggaaccgca
tgtgctctgcttcaggagattgtgaacatatatccgtctataactccgcccacgctgaca
gcacatcagtcaaaccgggtttgcaatgccctggccctgctgcagtgcgtcgcctcccat
ccggagacacgcacagccttcctccaggcgcagattcccctatacttgtacccctttctg
tcgaccacttcgaaaaccagaccatttgaatatttgcgtctgaccagcttgggagtcatt
ggtgccttggttaagaccgatgagcaggaagttatcacgttcttgctgaccacggaaatc
gttccactttgcttgagcattatggacagcggctcggagctaagcaagactgtggccaca
ttcatcattcagaagatcctgctcgacgagtcgggcctgtcatacatctgtcagacctat
gaacgcttctcgcatgtggccatcaccctgggaaaaatggtgatccagttggcaaaagag
ccgtgtgcccgtctgttgaagcacgtggtgcgttgctacctacgtctctcggacaacacc
cgcgctcgcaaagctctcggacagtgcttgccggatcagctgcgcgatggcactttcgct
ctgtgcctgcaggacgataagtccacgaagcagtggcttcaaatgcttctcaagaacttg
gagctgggaaacacaccacagcaaatcggcatgtccccattgggctcctag
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